Remersonia thermophila: 98122955
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Entry
98122955 CDS
T10833
Symbol
VTJ83DRAFT_2080
Name
(RefSeq) hypothetical protein
KO
K08330
autophagy-related protein 11
Organism
rthe Remersonia thermophila
Pathway
rthe04136
Autophagy - other
rthe04138
Autophagy - yeast
rthe04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
98122955 (VTJ83DRAFT_2080)
04136 Autophagy - other
98122955 (VTJ83DRAFT_2080)
04139 Mitophagy - yeast
98122955 (VTJ83DRAFT_2080)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98122955 (VTJ83DRAFT_2080)
03029 Mitochondrial biogenesis [BR:
rthe03029
]
98122955 (VTJ83DRAFT_2080)
Membrane trafficking [BR:
rthe04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
98122955 (VTJ83DRAFT_2080)
Mitophagy
Scaffold proteins
98122955 (VTJ83DRAFT_2080)
Mitochondrial biogenesis [BR:
rthe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
98122955 (VTJ83DRAFT_2080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
HAP1_N
Crescentin
FliD_C
Tropomyosin
ATG16
Exonuc_VII_L
FERM_f0
ubiquitin
Filament
EzrA
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
98122955
NCBI-ProteinID:
XP_070868620
JGI:
Remth1_2080
LinkDB
All DBs
Position
2:complement(join(2242882..2246883,2246954..2247065,2247120..2247187))
Genome browser
AA seq
1393 aa
AA seq
DB search
MAAQVLVAHTGQRLQIDVSKLSSVDEFKASVSRYTSIPPQCVIALTPQGKPLKLQTFQAE
KEIFVYDNRLAQPLSQSSRQTPKLDIPLPKRYVLQDQPNPAEPVKSIQAWQELFKTRRTW
SWKIVDDCRQMARETEERYSEMDIMLRCLDAAVTNLESVIKGLEPKYAELRKWLPGAQAD
YGNLTSRWEQYLSLARSIPVSPAMVQFMTGRSSGDAKGRASRQASLEDLVDLETARKAGR
LAPSALRKFNGRMADLERVANRLFQDAEDLFREYEKTIERSEMGHRGESEQLVNDIEALA
GKIDTDCRTTLEYSSDSGNALSQISKIGANHTERLLPSLGKRAAEMDDMLRYATQARNSL
AAESVEFMRSITDITALSHSVKSQINAMNQEDELATFDYLRLIQQVPYMYASFVAEAVKR
REWHEKMTQDSSTLANEMALFREEEIKRRRKWYKSIGNTYGPEPHSLDSHVPGLEVNLIG
EEEPWPSMTRKDLEEFLTLLQTNKADPEIISDVGKMISEMNSPTKQQFKRMKAFKNGSIH
EAALGRSGLLIRGDDDLLRSLQEDKSKLESKLKTAESRVRRLEDLLHRQSQASRPTLGHL
FQTPSQHLSDRGDSTISIKSPHPSDGRRASVEGVDALVQRVHQLEVELGAEKERAAALER
GLAEQTTLYNTAKTQVDEANSTKRDLLQNLEALKREFMDERKSLEDEIKRLQARLEDTED
EMEHFGESREHEKASYDETIHALRSEVERLTKEKQDEALTLEGKISFLREEARVQREAME
EQERQLRAAHDNAVKLSKQLATMSEAVDVQQTALRELWNQISPEELAPADAPSLVGELSE
KVIGALETVRRLHEDLSLLQSQFDAAQNTIKSVAADRDSLAERLSREEEASVHLRETLAE
EKARVSALEGELADSREQLDQLRSKLADGETGSESLRKRLQEEETKLAQVTEELASRQSR
VGSLEEEVRVLQDKLQRLQTKLSSLSALFDSRSEHARDLSQRLYSQNERLAHLLERLGFS
VTRQEEGMVIQKIPRSERTSQSVSDPDASTSLRRSGTLNSRASLFGSADLDLLNWVNASD
VDAESEKYTAYMSSLGSFDADAFCEVVYRRVKDIEHMARKLQRDARAYREKAHAMQKEAH
EKIAFKHFKEGDLALFLPTRNQTTGAWAAFNVGFPHYFLREQEAHRLRSREWLVARISRI
QERVVDLSKSLQNSSGLAKKGTGTDSESVNDDENDNPFDLSDGLRWYLIDAVEDKPGAPS
TPGIAKSTVAANNVEAMADRHTPGRAGTKGGGTGGRAGPSGIEGVSKTLSKSLESRRSST
GSKKALPFTIGASRSRDSPAVSETNSLRAAPTDGIPAASSPTQQHAAQGAATNGSAQTPA
DPDGGTRGTNGTE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccaggtgttggttgcccacacgggccagcgcctgcagatcgatgtctcgaag
ctttcttctgtcgacgagttcaaggcgtccgtttctcggtacacgtcgataccgccgcaa
tgcgtcattgctttgacgcctcaggggaagcccctcaagctacagacatttcaggccgag
aaggagatattcgtctatgacaaccggcttgcccaaccgctctcgcagagtagtcgtcag
actccaaaactcgatattcccctcccgaaacgatatgttttgcaggatcagccgaacccg
gccgaacctgtgaagtcaatacaggcgtggcaggaactattcaagacacggcggacctgg
tcgtggaagatcgttgacgactgtcgtcaaatggcccgggagactgaggaacggtacagc
gaaatggacatcatgctgcgttgtctcgatgctgccgtgacaaacctcgagtcggtcatc
aaggggctcgagccaaagtatgccgaactcagaaaatggcttcccggggcgcaagccgac
tacggaaacctgacttcgaggtgggagcagtatttatcccttgcaaggagcattcccgtg
tccccagccatggtccagttcatgactggccgcagctctggggatgccaaggggcgagct
tcccgtcaggcctctcttgaggacttggtggatctggagacggcgcggaaagcgggtagg
ttagcgccctcggctctccgcaagttcaacggccggatggcagatctcgagagggttgcc
aatcgtctcttccaagacgctgaggaccttttccgcgagtacgagaagaccatcgagcgt
tcagagatgggtcaccgcggcgagtctgagcagctcgtcaacgacatcgaggcgttggca
ggtaaaatcgacacagactgccggaccaccctcgagtactcgtccgactccgggaatgcg
ctctcgcaaatttccaaaattggcgcgaaccacaccgagcggttgctgccaagtttgggc
aagcgtgcggcggaaatggacgatatgcttcgctatgcaacacaggccagaaactccctt
gctgccgagtctgttgagtttatgaggagcatcaccgatatcaccgcactcagccacagc
gtcaagtcccagatcaacgccatgaaccaggaggatgaactcgccactttcgactacctg
cggctgatccagcaagttccgtacatgtacgcatccttcgtagcagaggcagtcaagcgg
cgtgagtggcatgaaaagatgacccaagactcatccactctcgcaaatgagatggccctg
tttcgtgaagaggaaatcaagaggcggcggaagtggtacaagtcgatcggcaatacgtat
gggcctgagccccacagcctcgacagtcacgtccctgggttagaagtgaacctcatcggc
gaggaggagccgtggccgtccatgactcgaaaggatctggaagagttcctgacgcttctc
cagaccaacaaggcggaccccgagatcatcagtgacgttggaaagatgatttccgaaatg
aacagcccaacaaagcagcaattcaagcggatgaaggccttcaaaaacggcagcatccac
gaagcggctctaggccgcagcgggctgctgatacgaggagacgacgaccttcttcggtct
ctgcaggaagacaaatcaaagctagaaagcaagctgaaaacggctgagagccgtgtgagg
agactcgaggatcttctccatcgacaatctcaggcatcacgcccaacactcggccatttg
ttccagactccaagccagcatctttcggaccgcggcgactctactatctccatcaaatcc
ccgcatccatcggacggccgtcgtgcatcggtagaaggcgtcgatgccctggtgcaacgt
gtccaccagctagaggtcgagctcggggccgaaaaggagcgcgccgcggcgctggagagg
ggcctcgccgagcagacgacactgtacaacactgcaaagacacaagtggacgaggcaaac
tcgacgaagcgcgaccttttgcaaaacctggaggccctgaagcgggagttcatggatgaa
cggaaatcgcttgaggatgaaatcaagcgtctgcaggctcgtctggaagacaccgaggat
gagatggagcacttcggggaatctagagaacatgaaaaggcgtcgtatgacgagacgatc
cacgccctcagaagcgaggttgaacgccttacaaaggagaagcaggatgaggcacttaca
ctcgaggggaagatcagctttcttcgtgaagaggctcgtgtacagcgcgaggccatggaa
gaacaggaacggcagctccgggcggcacacgacaacgccgttaagctcagcaagcaactt
gctacaatgagcgaggcagtcgatgtgcagcagacggctcttcgagagctctggaaccaa
atctcaccagaggagctggcgccagctgacgctcccagtttggtgggtgagctttcagaa
aaggtcataggggccttggagacggtgcgacgcttgcatgaggacctctccctgctccaa
tcacagttcgacgcagcacaaaacactatcaaatcggtggcggcagacagggattctctg
gcagagcggctttccagagaagaggaggcgtcagttcatctgcgagaaacgcttgcagaa
gagaaagccagagtttcagcgctcgaaggagagctcgccgacagccgggagcagcttgac
caactgcgaagcaagcttgccgacggggagacgggctcagagtccctcaggaagcgtctg
caagaagaagagacgaagcttgcgcaggtcaccgaggaactcgcttcacggcagtcacgg
gtgggcagcttggaagaggaggtccgggttctccaggataagctccagcgactgcagacg
aagctgtccagcctctctgccttgtttgactctcggtcagaacacgcgcgggatctctca
cagcgcttgtattcccagaacgaacgcctcgctcatctgcttgagcgacttgggttctcg
gtaactcgacaagaggaaggaatggtaatccagaagattccccggtctgagcggacctca
caaagcgtcagcgacccagatgccagcacatcgctgcgcaggtcaggtacgctcaatagc
cgcgcatccctgtttggcagcgcagacctcgacctgctcaactgggtgaacgcttcagac
gtggacgccgaatccgaaaagtacactgcgtacatgtcctccttaggctccttcgacgcg
gatgcgttctgcgaggtcgtgtaccggcgggtcaaggatatcgagcacatggcgcggaag
ctgcagcgtgatgcgagggcgtatagagagaaggcacatgctatgcaaaaggaagcgcac
gagaagatcgccttcaagcattttaaggagggcgatctggcgctcttcttaccgacgcgg
aatcagacaaccggtgcgtgggcggcattcaacgtcgggttcccccactacttcctgcgg
gaacaagaagcacaccggctccgcagccgggaatggcttgttgcccgcatctcgcgcatc
caagagcgcgtcgtggacctgtccaaatctctccagaactcgtctggcctcgccaagaaa
gggaccgggaccgattctgagtctgtcaacgacgacgaaaacgacaatcccttcgacctg
tccgacggtctccgttggtatctcatcgatgcagtggaagacaaaccaggagctccctcg
acgccgggcatcgcgaagagcacagttgctgccaataatgtcgaagctatggcagacagg
cacactcccgggcgcgctgggaccaagggaggtggcacgggaggccgcgccggtccgtcg
ggtatcgagggggtgagcaagacgttgtcaaaaagcctcgagagccgccggtccagcaca
ggttctaagaaggccttgccgttcacaatcggggcatccagaagccgggacagtcccgcc
gtgagtgagactaactcgttgcgtgccgcgcctaccgatgggatcccggccgcatcgagc
ccaacgcagcagcatgctgctcaaggtgcagccaccaacggatccgctcagactcctgcc
gatcctgatggaggtactcgaggcaccaacggcaccgagtaa
DBGET
integrated database retrieval system
