Remersonia thermophila: 98122965
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Entry
98122965 CDS
T10833
Symbol
VTJ83DRAFT_209
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
rthe Remersonia thermophila
Pathway
rthe03440
Homologous recombination
rthe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
98122965 (VTJ83DRAFT_209)
03450 Non-homologous end-joining
98122965 (VTJ83DRAFT_209)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98122965 (VTJ83DRAFT_209)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98122965 (VTJ83DRAFT_209)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
98122965 (VTJ83DRAFT_209)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
98122965 (VTJ83DRAFT_209)
BRCA1-C complex
98122965 (VTJ83DRAFT_209)
NHEJ (non-homologous end-joining)
MRX complex
98122965 (VTJ83DRAFT_209)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
TACC_C
AAA_29
Rad50_zn_hook
AAA_13
AAA_16
PyrI_C
Motif
Other DBs
NCBI-GeneID:
98122965
NCBI-ProteinID:
XP_070869562
JGI:
Remth1_209
LinkDB
All DBs
Position
1:741125..745060
Genome browser
AA seq
1311 aa
AA seq
DB search
MSRIEKLSILGVRSFGTQHPETIAFNTPLTLIVGYNGSGKTTIIECLKYATTGEMPPNSK
GGAFIHDPSIVGETDVRAQVKVSFRSTVGESYVVTRNVQLLVKKTTRSLKTLEGHLLLRH
NGERHDISSRVGELDKLVPEKLGVSRAVLDTVIFCHQDESLWPMSEPAALKKRFDEIFEA
MKYSKAIDNIKTLRNKKGAELQVLKEREAQDKINKERADKVFRLMTKLDTEIQEGRARYD
ELTEQMDRESAKIKEKRAEAARYQSIVNDLKTKMERLEYKKEAIEELRRRIDELPDSDRE
LRGTLDEYETTIERIVAERDGKAARFHDLQAELKACRAQHTAKAAEQGKHQSDKEKYERQ
LVARRAMVHEAATRHEIRGYDGDLDDDKVAAFFERIQKMLHDKKRELERLQRDHADELDK
KTAAITDRESRKASLQRDRSAAKQRIAAVGQETAALQAELAGLDIDEGAEAVLRAEMTEL
EGRIESAKADELRSDLDGQISKANDDIWRLEAQAAKLARELVECTRLASERAQLDLRKKQ
LAERRAELGILQGTWSEQLSALLGSGWQPETIESEFQTALRRQNDAVAERRRRKEATQQE
LKQAEYRLSSARDRHGNMSSERDECKRAVAKALKDVNPEAPPVEDYAAELESLEKELSQT
ETDLRLYDAMKSHYARVQDRAERANKCYYCERDFKDQEPVKSKLLAKIAKKLGDEEKQEL
LQDQVHLEEQIKTLKAVRARYDTYVRLDAELPSLAKDMAAVSAQREELVRRLEDQDLAFK
EADDRRQEIEALSKNVLKIAQMHKDIQEAERQVERSQQSSSAATRSPDEINEEQTACAEQ
TRAAQARLGKLAAERQRQKDAIKELEMQKLELRHKISTAAQKLERKRSLQESIKRLKEEQ
ARLRRSIQEADDEVERLEPEIQSARAALEEARQQGRAKEQRAAEERDAIATTASELKRTN
GEIQDYLDRGGPASLAANQRAIAALEATMAKLEAEMKDLTVQINKLGKDIDNSDAKKRNI
ADNLTYRKNLRESEALEREIRELEARDAQADYDRLEAEARYLESRRAKVTTDRDRLAGSL
GTLRDEFDRLNQEYELDLKNAKARYKESHIKVETMKAAIDDLARGAAALDHAIMQYHSLK
MEEINRTIGELWQSTYQGTDIDTIQIRSDVEPGSAASSGSRRSYNYRVTMVKGDTEMDMR
GRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDSDNIRSLAESLHGIIKARRG
QGNLQLIVITHDEEFLKHMQCSDFCDDFYRVKRDEKQNSVIVRESITRIME
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggatagaaaagctctccatcctcggcgtgcgctccttcgggacgcagcacccc
gagaccatcgccttcaacaccccgctcaccctgatcgtcggctacaacggctccggaaag
accaccatcatcgaatgcctcaagtacgccaccaccggcgagatgccgcccaacagcaag
ggcggcgccttcatccacgaccccagcatcgtcggcgagacggacgtgcgcgcccaggtc
aaggtctcgttccgctcgaccgtcggcgagtcgtacgtcgtgacccgcaacgtgcagctc
ctggtcaaaaaaaccacccgaagcctcaagaccctcgagggccacctgctgctgcgccac
aacggcgagcgccacgacatctcgtcgcgcgtcggcgagctcgacaagctcgtccccgag
aagctgggcgtgtcccgcgccgtcctcgacaccgtcatcttctgccaccaggacgagtcc
ctgtggcccatgagcgagccggccgccctcaagaagcgcttcgacgagatcttcgaggcc
atgaagtacagcaaggccatcgacaacatcaagacgctccgcaacaaaaagggcgccgag
ctccaggtgctcaaggagcgcgaggcccaggacaagatcaacaaggaaagggccgacaag
gtcttccggctcatgaccaagctcgacaccgagatccaggagggccgcgcccgctacgac
gagctcaccgagcagatggaccgcgagagcgccaagatcaaggagaaacgagccgaggcc
gcccgctaccagagcatcgtcaacgacctcaagaccaagatggagcggctcgagtacaag
aaggaggccatcgaggagctgcgccgccgcatcgacgagctgccggactccgaccgggag
ctccgcggcaccctcgacgagtacgaaaccaccattgagaggatcgtcgccgagcgggac
ggcaaggccgcccggttccacgacctccaggccgagctcaaggcgtgccgcgcccagcac
accgccaaggccgccgagcagggcaagcaccagtcggacaaggaaaagtacgagcgccag
ctcgtggcgcgccgcgccatggtccacgaggcggcgacgcgccacgagatccgcggctac
gacggcgacctggacgacgacaaggtggcggcctttttcgagcgcatccaaaagatgctc
cacgacaagaagcgcgagctcgagcggctccagcgcgaccacgccgacgagctcgacaag
aagacggccgccatcacggaccgcgagagccgcaaggcctcgctccagcgcgaccgctcg
gcggccaagcagcgcatcgcggccgtgggccaggagacggccgcgctccaggccgagctg
gccggcctcgacatcgacgagggcgccgaggcggtcctgcgcgccgagatgacggagctc
gagggcaggatcgagtcggccaaggccgacgagctgcgctccgacctcgacggccagatc
agcaaggccaacgacgacatctggcgcctcgaggcgcaggccgccaagctcgcccgcgag
ctcgtcgagtgcacccgcctggcgtcggagcgggcccagctcgacctgcgcaagaagcag
ctggccgagcgccgcgcggagctcggcatcctccagggcacgtggagcgagcagctgtcg
gcccttctcggcagcggctggcagcccgagaccatcgagtccgagttccaaacggccctc
cggcgccagaacgacgcggtggccgagcggaggcggcgcaaggaggcgacccagcaggag
ctcaagcaggccgagtacaggctgtcgagcgcgcgcgaccggcacggcaacatgtcgtcg
gagagggacgagtgcaagagggccgtcgccaaggccctgaaggacgtcaaccccgaggcg
ccgccggtcgaggactacgcggcggagctggagagcctcgagaaggagctgagccagacc
gagacggacctgcggctctacgacgccatgaagagccactacgccagggtccaggaccgc
gccgagcgcgccaacaagtgctactattgcgagcgcgacttcaaggaccaggagcccgtc
aagtcgaagctcctggccaagatcgccaagaagctcggcgacgaagagaagcaggagctg
ctgcaggatcaggtccacctggaggagcagatcaagaccctcaaggcggtccgcgcaagg
tacgacacgtacgtgcgcctcgacgccgagctgccctcgctggccaaggacatggcggcc
gtctcggcccagcgcgaggagctggtccggcgcctcgaggaccaggacctcgccttcaag
gaggccgacgaccggcgccaggagatcgaggcgctgagcaaaaacgtgctcaagatcgcc
cagatgcacaaggacatccaggaggccgagcggcaggtggagcggtcgcagcagtcgtcg
agcgccgcgacgcgcagccccgacgagatcaacgaggagcagacggcgtgcgccgagcag
acccgggccgcccaggccaggctcggcaagctcgcggccgagcggcagcggcagaaggac
gccatcaaggagctcgagatgcagaagctcgagctgcggcacaagatcagcaccgcggcc
cagaagctggagcgcaagaggagcctccaagagtccatcaagcggctcaaggaggagcag
gcgcggctgcgccggagcatccaggaggcggacgacgaggtggagcgcctcgagcccgag
atccagagcgcgcgcgcggccctcgaggaggcgcgccagcagggccgcgccaaggagcag
cgggcggccgaagagcgcgacgccatcgcgacgacggcgagcgagctcaagcggaccaac
ggcgagatccaggactacctggaccggggcggcccggcgagcctcgcggcgaaccagcgg
gccatcgccgccctcgaggccaccatggccaagctcgaggccgagatgaaggacctgacg
gtccagatcaacaagctgggcaaggacatcgacaacagcgacgccaagaagcgcaacatc
gccgacaacctcacataccgcaagaacctgcgcgagagcgaggccctggagcgcgagata
cgggagctcgaggcccgcgacgcccaggccgactacgaccgcctcgaggcggaggcgcgc
tacctcgagtcgcggcgggccaaggtcacgacggaccgcgaccgcctcgccgggtcgctg
ggcacgctgcgcgacgagttcgaccggctcaaccaggagtacgagctcgacctcaagaac
gccaaggcccgctacaaggagtcgcacatcaaggtcgagaccatgaaggcggccatcgac
gacctggcccgcggcgccgccgccctcgaccacgccatcatgcagtaccactcgctcaag
atggaggagatcaaccgcaccatcggcgagctgtggcagagcacgtaccagggcaccgac
atcgacacgatccagatccggtccgacgtcgagccgggcagcgccgcctccagcggcagc
cgccgcagctacaactaccgcgtcaccatggtcaagggcgacaccgagatggacatgcgc
ggccggtgcagcgccggccagaaggtgctggcgagcatcatcatccggctcgcgctggcc
gagtcgtttggcgtcaactgcggcctgatcgcgctcgacgagcccaccacgaacctcgac
agcgacaacatccggagcctggccgagagcctgcacggcatcatcaaggcccgccggggc
cagggcaacctgcagctcattgtcatcacgcacgacgaggagtttttgaagcacatgcag
tgcagcgacttttgcgacgacttttaccgcgtcaagcgggacgagaagcaaaacagcgtc
attgtgcgcgagagcatcacgaggatcatggagtag
DBGET
integrated database retrieval system
