Remersonia thermophila: 98122987
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Entry
98122987 CDS
T10833
Symbol
VTJ83DRAFT_2109
Name
(RefSeq) hypothetical protein
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rthe03041
]
98122987 (VTJ83DRAFT_2109)
03110 Chaperones and folding catalysts [BR:
rthe03110
]
98122987 (VTJ83DRAFT_2109)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
98122987 (VTJ83DRAFT_2109)
Spliceosome [BR:
rthe03041
]
Complex C
Other components
PPlases
98122987 (VTJ83DRAFT_2109)
Chaperones and folding catalysts [BR:
rthe03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
98122987 (VTJ83DRAFT_2109)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Vps41
WD40_Gbeta
WD40_RFWD3
Beta-prop_WDR19_2nd
Ge1_WD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
98122987
NCBI-ProteinID:
XP_070868649
JGI:
Remth1_2109
LinkDB
All DBs
Position
2:complement(join(2390798..2390935,2391006..2392672,2392742..2392829))
Genome browser
AA seq
630 aa
AA seq
DB search
MADTNQDDDVKSNKRSHADFAGDNGNDGSDSSSDDDMGPQLPSAAPKKKRRVLPYEKLYI
SALPKSGRYSKSLMHKEQLSFILLTPITEFLITTSVDGVVKFWKKVSEGIEFVKEFKAHQ
GHIRSVSCSQDGRSFATAGVDKTVKLFDVVTFDLLAALQLDYEPRCVCWVHKKGSSLPLL
AISDSEPKPSIRIYDGRGENLQPIHTITGLHRSPVSLMVYNDRFDCVISADEGGMVEYWR
PGGSYEKPDNVFKYKSSTNLFDFKKAKSVPTSVTLSPDGSRFATMSFPDRKIRIFDFASA
QLQRTYDESLQVIEDMQQAGTALQKLDSVEFGRRLAQEREVESPELRDKFNIVFDESGHF
ILYGSYLGVKVLNTYTNKVVKVYGRDEGFRPLSVALYQGQPQRKDTTTVAMAASSNPLLQ
DSETRDPILVATGIGKVRFYMFTNDEEVSKTSRDVQNEKPTILGGKKAAEAKKKAETGTA
AVIHTTYGDIHIRLFPDAAPKAVENFVTHSRRGYYNGTIFHRVIRKFMIQGGDPLGDGTG
GESIWGKEFEDEFSSLKHDKPYTVSMANAGPNTNGSQFFITTEKTPWLDNKHTIFGRAVQ
GLDVIHRIENVKTYKEKPIEDIKIINIDIV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgaaccaggacgacgatgtcaagtcgaacaagcgcagccacgccgatttc
gctggcgacaacggcaacgatggctccgacagctcctcggacgacgacatgggccctcag
ctgccttccgcagcccccaagaagaaacgccgcgtcctgccctacgagaagctgtacatc
tccgctcttcccaaatccggccgctactcgaagtccttgatgcacaaggaacagctctcc
ttcatcctgttgacccccatcaccgagttcctcatcacaacatccgtcgacggcgtggtc
aagttctggaagaaggtttccgagggaatcgagttcgtcaaagagttcaaggctcaccag
gggcacatccgctccgtgtcctgcagccaggacggccggagctttgcgaccgccggtgtg
gacaagacagtgaagctgtttgatgtggtgacctttgatctcctcgccgccctccagctt
gactacgaaccgaggtgtgtctgctgggtccataagaagggctcatctctgcctcttctc
gccatctccgacagcgagccgaagcccagcattcgcatctacgacggccgcggcgaaaac
ctgcagccaattcacaccataaccggcctgcaccggagtcctgtgtccctgatggtctac
aacgataggttcgattgcgtcatatctgcggatgagggcggcatggtggaatactggagg
ccagggggctcctacgagaagcccgacaacgtcttcaagtacaagagctcgaccaatctc
ttcgacttcaaaaaagcaaagtctgtgccgacctccgtcaccttgtcaccggacgggagt
cgcttcgccaccatgtcgttccccgaccgaaagatccgcatcttcgacttcgcctcggcg
cagctgcagcgaacatatgacgaatccctccaggtcatcgaggatatgcaacaggctgga
actgcgctgcagaagctggactcggttgagtttgggcgccggctcgcccaggagcgcgag
gtcgagtcaccagagctgcgcgataagttcaatatcgtctttgatgagtcaggccacttc
atcttgtatggctcctacctcggagtcaaggtcctcaacacctacaccaacaaggttgtc
aaggtgtatggtcgagacgaaggtttccgcccgctctctgtggctctgtaccaaggccag
ccccaaagaaaggacacaacaaccgtggccatggccgcatcaagcaacccccttctccaa
gactccgagacgcgtgaccccatcctcgtcgcgacaggcatcggaaaggtccgcttttac
atgttcaccaacgacgaggaagtctccaagacatcaagagacgtgcagaatgagaaaccc
accatcctcggcggcaagaaagcggccgaggccaagaagaaggccgagacgggcaccgct
gccgtcatccacaccacgtacggcgacatccacatccgcctcttccccgacgctgcgcca
aaagccgtcgagaactttgtcacgcattcgcggcggggatactacaacggcaccatcttc
caccgcgtcatccgcaagttcatgatccagggtggcgacccgctcggcgatggtaccggc
ggcgaaagcatttggggcaaggagtttgaggacgagtttagcagcctgaagcacgacaag
ccgtacacggtgagcatggcaaacgccgggccaaacaccaacgggagccagttctttatc
acgaccgaaaagacgccctggctggacaacaagcacaccatcttcggccgcgccgttcag
ggactggacgtcatccacaggatcgaaaacgtcaagacgtacaaggagaagcctattgag
gacatcaagatcatcaacatcgacatcgtgtag
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