KEGG   Remersonia thermophila: 98123033
Entry
98123033          CDS       T10833                                 
Symbol
VTJ83DRAFT_2150
Name
(RefSeq) hypothetical protein
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
rthe  Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rthe03021]
    98123033 (VTJ83DRAFT_2150)
   03036 Chromosome and associated proteins [BR:rthe03036]
    98123033 (VTJ83DRAFT_2150)
Transcription machinery [BR:rthe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     98123033 (VTJ83DRAFT_2150)
Chromosome and associated proteins [BR:rthe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     98123033 (VTJ83DRAFT_2150)
    SLIK complex
     98123033 (VTJ83DRAFT_2150)
SSDB
Motif
Pfam: SNF2-rel_dom Chromo Helicase_C HTH_CHD1_Hrp3 CHD1-like_C HDA2-3 ResIII Cdh1_DBD_1 DEAD Chromo_MIT1
Other DBs
NCBI-GeneID: 98123033
NCBI-ProteinID: XP_070868690
JGI: Remth1_2150
LinkDB
Position
2:complement(join(2540442..2540886,2540961..2545014,2545114..2545219,2545283..2545309,2545381..2545836,2546289..2546333))
AA seq 1710 aa
MQRERSESAGVADDPTYPVDSIAMSTSPDPGPVNGHASPSAGDRSMHTDDGSQSDAERST
VNASGPLLDAGSPAESSDAEGSPDPGAEYTPGEQQDEAVESSSSEHDAEDDGDFEAAGSP
ASNESDDNASDRAASAPTRAAPKRKAPLITEEDYIRENPELYGLRRSSRPTQRRKLVESE
DDDDNDDDDSDASPAPRKAANKRRRIERSVTTSKRPTPARQPSFDDSDSDTYGGAKARSF
QKKARRQQQLDPSLMAEKRWSNRRAAQVSAGMYHESDMDEEEEEDGTPGYWAAAEVEDNS
PYIEKILRHRLKEGVELAPDATRHDFEYYIKWQGKSHLHNTWETTESVAGFRGFRRLENY
YKKMVEYELDIKFGGDEITPEQREQWLLDREREEEALEDYTKVERIVAVREGDNGLEYFV
KWKGLQYDDCTWEDADQIGGLAQDKIEQFRDRSTRSWQSDKKQMNVETRSRMTKLEKQPP
YIKNGELREFQMIGLNFLALNWTRNNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFL
VVAPLSVIPAWCDTFNHWAPDLNYVVYLGPEAARANIREYELFIDGNPKKTKFNVLVTSY
EYILADADFLKNIKWQVLAVDEAHRLKNRESQLYVKLNGFGIPSKILITGTPIQNNLAEL
SALMDFLNPGKILIDEELELLSADTKDGSNAEMDEEKRLRTQQKLSELHAAIKPYILRRT
KEKVESDLPPKTEKIIRVELSDLQLEYYKNILTRNYAALTDASNGHKQSLLNIMMELKKV
SNHPYMFVGAEERVLAGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVK
MLDILGDYLRVRGYQFQRLDGTIPAGPRRMAINHFNAEGSEDFCFLLSTRAGGLGINLMT
ADTVIIYDSDWNPQADLQAMARAHRIGQKKPVNVYRLVAKQTIEEEVVKRARNKLFLEYL
TIQAGVTDEGKALREQFKQRGLKIDEAKTAEDISMILKMRSQDLFSQSSNQQKLEQLDID
AILENAEVTKTEMDDKINLSTGGIDWDNWMQVTDVKVDELALDWDQIIPPDELAAIKAEE
EQKKHDEYLAKAMEESAPRKATLKITNKKAAAENERAERLEKKRQRERREMEEREEARAA
AQDPRRPLNEKETRNLIRAFFRYGNFEDREDEIVHDARLTDRDRDFLKSVVDDLVAVSRQ
AIDANNEKLREEEERAGKPLAKKDKKAVLVDFGEVRKINAETVVERPPQLKLLRRVLAEQ
DDVLSFRLPEASKAAQYTCEWGAREDAMLLIGIDKYGFGAWTQIRDDAQLQMHHKFFLEE
HRVDKREERRRAEDKGIQSPGAVHLVRRSEYLLSVLMAKYSNDENAKKAVENHHRSKKLL
TNGLRRGGEGSSVSASPAPLAKKAGQHRDRDHHRSYSNANDRGTPRPDKRKYDDYDSRDS
KHRRIEGDSKQQEKHKEKEKHKMDPETMEKCKRERQKACERFRELCKLRDDEIDLSDNKQ
LVWSVLRPLRSNMERIMYSKEDYPAAKERAKILGEEIRTFGNFLKNLQTDSGTDMASLEP
QFWEFLSSIWPLGDVKVSGKRLQRMFGDLMERDRKERLREEEEKRARAKNPDLEDGEIPS
DREELRRQQKDPYRDDRREERREERRDERRGGGGLGGAEDRGREEPKRRNYYDDGDRLNF
YRHRRPDNRNVPVRHSSWQSRSPPTRQSPY
NT seq 5133 nt   +upstreamnt  +downstreamnt
atgcagagggagagatccgagagtgcgggtgttgctgatgatcctacctatcccgttgat
tccatcgccatgtcaacatctcccgatcccggtccggtgaacggacatgcttccccgtcg
gccggcgatcgtagcatgcacacagacgacggcagccagagcgatgccgaacgctcgacc
gtgaacgcatccggccccctccttgatgccggctcgccggccgagtcctccgacgccgag
ggctcccccgatcccggcgccgagtacacccccggcgagcaacaagacgaggccgtcgaa
tcgagctccagcgagcacgacgccgaagatgacggcgatttcgaggccgcgggcagcccg
gcgtccaacgaaagcgacgacaacgcttccgaccgcgccgcctcggccccgacccgcgcc
gcccccaagcggaaagcccccctaataacagaagaggactacatacgggaaaaccccgag
ctgtatggcctgagacgtagctctcgtcctacccagcgccgcaagctggtcgagtcggag
gacgatgacgacaacgatgatgacgattccgacgccagcccggctccccggaaagcggcg
aacaaaaggcgccgcattgagcgctccgttaccacctccaagcgacccactcccgcccgc
cagccgtcgttcgacgattcggattcggatacctacggcggcgccaaagcccgcagcttc
caaaagaaggctcgccgtcagcaacagctggatccctccctcatggccgagaagcgatgg
tccaaccgccgtgccgcccaggtgtcggcgggcatgtaccacgagagcgacatggacgag
gaggaagaggaggacggcacgcccggctactgggcggcggccgaggtggaggacaactcc
ccgtacatcgaaaagatcctgcgccaccgcctcaaggagggcgtggagctcgctcccgac
gcgactcgccacgacttcgagtactacatcaagtggcagggcaagtcgcacctgcacaac
acgtgggagacgaccgagtccgtcgccgggttccggggcttccgccgcctcgagaactac
tacaagaagatggtggagtacgagctcgacatcaagttcggcggcgacgagatcaccccc
gagcagcgcgagcagtggctcctggaccgcgagcgcgaggaggaggcgctcgaggactac
accaaggtggagcgcatcgtcgcggtccgcgagggcgacaacggcctcgagtactttgtc
aagtggaagggcctccagtacgacgactgcacctgggaggacgccgaccagatcggcggc
ctggcgcaggacaagatcgagcagttccgcgaccggtcgacgcgctcgtggcagtcggac
aagaagcagatgaacgtcgagacgcggtcgcgcatgaccaagctcgagaagcagccgccc
tacatcaagaacggcgagctccgcgagttccagatgatcggcctcaacttcctggccctc
aactggacccgcaacaacaacgtcatcctggccgacgagatgggcctcggcaagacggtc
cagaccgtctccttcttgagctggctccgcaacgaccgcggccaggaagggccgttcctc
gtcgtggcccccctcagcgtcatccccgcctggtgcgataccttcaaccactgggctccc
gacctcaactacgtggtctacctggggcccgaggcggcccgcgccaacattcgcgagtac
gagctcttcatcgacggcaaccccaaaaagacaaagttcaacgtcctggtcacctcgtac
gagtacatcctggccgacgccgacttcctcaagaacatcaagtggcaggtgctggccgtg
gacgaggcgcaccgcctcaagaaccgcgagtcccagctgtacgtcaagctgaacggcttt
ggcatccccagcaagatcctcatcacgggcacgccgatccaaaacaacctggccgagctg
tcggcgctcatggactttctcaaccccggcaagatcctcatcgacgaggagctggagctt
ctgtcggccgacaccaaggacgggagcaacgccgagatggacgaggagaagcgcctcagg
acgcagcagaagctcagcgagctgcacgccgccatcaagccctacatccttcgccgcacc
aaggagaaggtcgagtcggacctgccgccaaagacggagaagatcatccgcgtcgagctc
tcggacctgcagctcgagtactacaaaaacatcctcacccgcaactacgccgccctcacg
gacgcgagcaacggccacaagcagtcgctgctcaacatcatgatggagctgaagaaggtc
agcaaccatccctacatgttcgtcggcgccgaggagcgcgtgctcgccggcagcacccgc
cgcgaggaccagatcaagggcctcatcaccagcagcggcaagatgatgctcctggaccag
ctgctcgccaagctcaagaaggacggccaccgcgtcctcatcttcagccagatggtcaag
atgctggacatcctgggcgactacctgcgcgtgcgcggctaccagttccagcgcctcgac
ggcaccatccccgccgggccgcgccgcatggccatcaaccacttcaacgccgagggcagc
gaggatttctgcttcctcctctccacccgcgccggcggcctcggcatcaacctcatgacg
gccgacacggtcatcatttacgactcggactggaacccccaggccgacctgcaggccatg
gcgcgcgcccaccgcatcggccagaagaagcccgtcaacgtctatcgcctggtcgccaag
cagaccatcgaggaggaggtcgtcaagcgcgcccgcaacaagctgttcctcgagtacctg
accatccaggccggcgtgaccgacgagggcaaggcgctgcgcgagcagttcaagcagcgc
ggcctcaagatcgacgaggccaagacggccgaggacatctccatgatcctcaagatgcgc
tcgcaggatctcttctcgcagtcgagcaaccagcagaagctcgagcagctcgacatcgac
gccatcctcgaaaacgccgaggtgaccaagacggagatggacgacaagatcaacctgagc
accggcggcatcgactgggacaactggatgcaggtcaccgacgtcaaggtcgacgagctg
gccctcgactgggaccagatcatcccgccggacgagctcgccgccatcaaggccgaggag
gaacagaagaagcacgacgagtacctggccaaggccatggaggagagcgcccctcgcaag
gccacgctcaagatcaccaacaagaaggccgccgccgagaacgagcgggccgagcggctc
gagaagaagcgccagcgcgagaggcgagagatggaggagcgcgaggaggcgcgggccgcg
gcccaggacccccgccgtcccctcaacgagaaggagacgcgcaacctgatccgcgccttc
ttccgctacggcaactttgaggatcgcgaggacgagatcgtccacgacgcccgcttgacc
gaccgcgaccgcgactttctcaagtcggtcgtcgacgacctcgtcgccgtgagccggcag
gccatcgacgccaacaacgaaaagctgcgcgaggaggaggagagggccggcaagcccctg
gccaagaaggacaagaaggccgtcctggtcgactttggcgaggtgcgcaagatcaacgcc
gagacggtggtggagcggccgccccagctcaagctcctgcgccgcgtcctggccgagcaa
gacgacgtcctgtcgttccggctgcccgaggccagcaaggcggcgcagtacacgtgcgaa
tggggcgcccgcgaggacgccatgctcctcatcggcatcgacaagtacggctttggcgcg
tggacgcagattcgcgacgacgcgcagctgcagatgcaccacaagttcttcctggaggag
caccgcgtcgacaagagggaggagcgccgcagggccgaggacaagggcatccagtcgccc
ggcgccgtccacctggtccgccgatccgagtacctcctctcggttctcatggccaagtac
tccaacgacgagaacgccaagaaggcggtcgagaaccaccaccgcagcaaaaagctcctc
accaacggcctccggcggggcggcgaaggcagctccgtctcggcgtccccggcccccctg
gccaagaaggcgggccagcaccgcgaccgcgaccaccaccgctcgtacagcaacgccaac
gatcgcggcacgcctcgtcccgacaagcgcaagtacgacgactacgacagccgcgactcc
aagcatcgccgcatcgagggcgactccaagcagcaggagaagcacaaggaaaaggagaag
cacaagatggacccggagaccatggagaagtgcaagcgggagcggcaaaaggcctgcgag
cggttccgcgagctctgcaagctgcgcgacgacgagattgacctctcggacaacaagcag
ctggtctggtcggtgcttcggcctttgaggtccaacatggagcgcatcatgtactccaag
gaggactaccccgcggccaaggaacgggccaagatcctgggcgaggagatccgcaccttt
ggaaacttcctcaagaacctgcaaacggacagcgggaccgacatggccagcctcgagccc
cagttctgggagtttttgtcctcgatctggcccctcggcgacgtcaaggtctcgggcaag
cggctgcagcgcatgtttggcgacctcatggagcgggaccgcaaggagcgcctcagggag
gaggaagagaagcgcgcgcgcgccaagaaccccgacctcgaggacggcgagatccccagc
gaccgcgaggagctgcgccgccagcaaaaggacccgtaccgcgacgaccgccgcgaggag
cgccgcgaagagaggcgcgacgagcggcgcggcggcgggggccttggcggggcggaggat
cgtggccgcgaggagcccaagaggcgcaactattacgacgacggcgaccggctgaacttt
taccgccaccgccgcccggacaataggaacgtcccggtgaggcactcgtcgtggcagagc
cgcagcccgccgacccggcagagcccttactag

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