Remersonia thermophila: 98123203
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Entry
98123203 CDS
T10833
Symbol
VTJ83DRAFT_2303
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
rthe Remersonia thermophila
Pathway
rthe03013
Nucleocytoplasmic transport
rthe03015
mRNA surveillance pathway
rthe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98123203 (VTJ83DRAFT_2303)
09122 Translation
03013 Nucleocytoplasmic transport
98123203 (VTJ83DRAFT_2303)
03015 mRNA surveillance pathway
98123203 (VTJ83DRAFT_2303)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98123203 (VTJ83DRAFT_2303)
03041 Spliceosome [BR:
rthe03041
]
98123203 (VTJ83DRAFT_2303)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
98123203 (VTJ83DRAFT_2303)
TREX complex
98123203 (VTJ83DRAFT_2303)
Spliceosome [BR:
rthe03041
]
Complex C
Other components
EJC/TREX
98123203 (VTJ83DRAFT_2303)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
98123203 (VTJ83DRAFT_2303)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
98123203
NCBI-ProteinID:
XP_070868843
JGI:
Remth1_2303
UniProt:
A0ABR4DLD7
LinkDB
All DBs
Position
2:complement(join(3088072..3088743,3088803..3088869,3088923..3088971,3089047..3089078,3089161..3089195,3089642..3089722,3089781..3089834))
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AA seq
329 aa
AA seq
DB search
MSRDLDRSLDDILAERRQENKKAPPRNGGGRRRDRPDPPRDGVRKSFRDDAPRNIDSEWV
HDKFEDYGNRRSGSRYRRSPDAPSDVRGTKLRVDNLHYELTQDDLEGLFSRIGPIVSLEL
KYDRAGRSEGTAFVTYESHHDAKRAVAEYDGANAAGQPIRLTLLPSGPVGGGRHAASSSR
PLAERITVPGQQKGGRSRSLSPGRRARDPDEEAARRGVDRYRPRGGRGGTNDGRLSRSRS
PPPARGGDRRRGDGARRPGGRREAGGARGGRGEKGAARPKKTQEELDAEMEDYFAGLNGG
AAASSADAAAPAPQQQQPQGGDEDVDMIE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgatctcgatcgcagcctcgacgacattcttgcggagcgacgccaggagaac
aagaaagctcccccccgcaacggcggcggccgtcgccgtgacaggcccgaccctcccaga
gatggtgtcagaaagtccttcagagacgatgcgccgcgaaacattgactccgaatgggtc
catgacaagtttgaagactatggcaaccgccgatccggctctagataccgccgctctccg
gacgctccaagcgatgtccggggcaccaagctccgagtcgacaacctgcactacgagctg
acgcaagatgaccttgagggcctgttctcccgcatcggccccatcgtctccctcgagctc
aagtacgaccgcgccggccgctccgaaggcaccgccttcgtcacctacgagtcccaccac
gacgcgaagcgtgccgtcgcggaatacgacggcgccaacgccgccggccagcccatccgc
ctgaccctccttcccagcggcccggtgggaggcggccgccacgccgcttccagcagccgg
cccctggccgagcgcatcacggttcccggccagcagaaaggcggtcgctcgcgctcgctg
tcccccgggcgccgcgccagggatcccgacgaagaagccgcccgccggggggtggatcgg
taccggcccaggggtggacgcggcggtactaacgatggaaggctgagccggtcgcgcagc
ccgcctccggcaagggggggcgacaggcggaggggtgacggggccagaaggccgggcggc
aggcgggaagccggcggcgctcggggcgggcgcggagagaagggggctgctcggcccaag
aagacgcaggaggagctggatgcggagatggaggattattttgccggcctgaacggcggt
gcggcggcttcgagcgcggatgccgctgcgccggctccgcagcagcagcagccgcagggt
ggcgatgaggacgtggacatgattgagtag
DBGET
integrated database retrieval system
