Remersonia thermophila: 98123248
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Entry
98123248 CDS
T10833
Symbol
VTJ83DRAFT_2344
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
rthe Remersonia thermophila
Pathway
rthe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
98123248 (VTJ83DRAFT_2344)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rthe01002
]
98123248 (VTJ83DRAFT_2344)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98123248 (VTJ83DRAFT_2344)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98123248 (VTJ83DRAFT_2344)
Peptidases and inhibitors [BR:
rthe01002
]
Metallo peptidases
Family M1
98123248 (VTJ83DRAFT_2344)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
98123248 (VTJ83DRAFT_2344)
Coactivators
SAGA/TFTC/STAGA complex
98123248 (VTJ83DRAFT_2344)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
98123248 (VTJ83DRAFT_2344)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
TraT
Motif
Other DBs
NCBI-GeneID:
98123248
NCBI-ProteinID:
XP_070868884
JGI:
Remth1_2344
LinkDB
All DBs
Position
2:complement(3237371..3242113)
Genome browser
AA seq
1580 aa
AA seq
DB search
MPALIENEASGEPAVISEFPAGAEPFVIIKQDVEIEVDFREQSIRGVSTIHLFTINPDQE
EIQLDARQCEIDLDNITVDGFKTTATFSDPYDLTTVPRQWQIGASQHHILKRRMAPLRPP
KRPEVPNKDRVTRPCCVPADRSLKISLRRPDGLSRDEPRRTLKLKAPAKYDRDPPRDAPD
DSGEEKHGIKICIPFRSKNIRDGLHFVGVDEGDLRYPHVYTLHSLEPGTASCIFPCVDDP
ASRHPWRILIKCPRTLGDVFDRSPTAAPPAAAAAASGPLSPGGGRKRKPGEPPTPSASPP
VFLSEEDRLMEMTVICSGNLSGEQIDPKDPRKKIMTFESQLSAAYQIAFAIGPFEHIQLW
SEFRTEEADEKLGANAAKIHAYCLPRRADEVRNTCAPIVAAADFFAPEFGRYPFESYKVV
FVDDMVPETVAATSMSLCSNRLLYPEDIVDTEIDVTRTLVHALASQYFGVHVVPNQRSDM
WLIVGIQWFMTDLFMRTLCGNNWYRFHLKTLSDRLVETDVHRPSLHDLGEYLHVGDFELE
FMSLKAPLVLFILDQRMSKIPGSMGIVRIISQIVSNANINATIESTSLSDADFRRACEKK
SQYRPDELWQQWVHGAGCPKLLIKQRFNKKNLNVDIVITQTQARDSAQPKAITKDEFLKE
LLEEVHEVWAGTVPKLFTGPFTVRIHEADGTPYEHYLAITDKDKLGTTLQIAYNTKYKRM
KRTKKATAAAAAAAAAGGNAADQEDDVVYFNMLGDVLMSQRDVENWGLQDWSEAVQQAMD
QESYEWIRLDCNFEWLCEMITDMPGYMYLAQLQQDRDVVAHQDAMLFFKRGRRHGVASTI
ETRTAMDRRYYHGIRTMAIEDLPKQADADLNYIGTAQLILLFRHFFCDRMVGKNGSVTYP
PVPNDFADKAQYAVQCALPAAIARTRENGRCSRQARNFLLDLLLFNDNSENDYSDHFYIA
KLLDALTTSIIPDNWHGERDLYSSLGSDEDDELELKRFIEKAIEEIDKYRRMDEWTSTYQ
NIWTRTALRCKMRLMKANVIPTAPLEFVRYLQDGNHDLIRIEAFDCLVELGMLAKVSITR
LLLACVSGDPSPFVRDRLFKIFSKGMALVALGETKAAQQKPKEDILDDGGLVVELGEAEM
QQRRLAATRNQSIQAALTALKEELRGSIELQEAMWTAIESPIISAREKFQLLTLCSAMFE
QDDSLLLTFNYPKVWKCTRVPSFDESPFASSTHRANVRKRCMVKFSTQYRTVPRRKYAPE
PAAPPLPWEPKPPEVKKIKLSSKPSFGPSSGGAATPQTPGGAVRRDSISVTLTRPTASAA
AAVATPAPPSDSIAVQPLARVSATPSIASSPPPSSSAASLVLPSLHPSSAAKPSLGGPSS
AQRPKPPKKRKSDEGDGHGDRPIKKLATANGRPRKIVRLRFTAWDRLPGRIREKIRAAKA
AARAPAASSTTIVATPTANRTPLPGHSGSGSGSGSGVSASPSVDHRHGPQGTNGNGNGNG
LSSAIKKRKPLPSAAPQHHGQPPAGTAASATAPRHSPSPMSTPAAKPAVGGHVGTGEPKK
KVIKLKLKPSVHATPPQTPR
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctcatcgaaaacgaggcctccggcgagcccgccgtcatctcggagtttccg
gccggcgccgagccgtttgtcatcatcaagcaagacgtcgagatcgaggtggatttccgg
gaacagagcatccgcggcgtctcgaccatccacctgtttacgatcaacccggatcaggaa
gagatacagctcgacgcgcgccagtgcgagatcgacctcgacaacatcaccgtcgatgga
ttcaagacgaccgccaccttttccgacccgtacgacctgacgacggtcccgcgacaatgg
cagatcggcgcctcccagcatcacattctcaaacgccgcatggccccgttgcgccccccc
aaacggcccgaggtgcccaacaaggatcgggtgacacggccgtgctgcgtccccgccgac
cgttccctcaagattagcctgcggcggcccgatggcctgtccagggacgagcctcgtcgc
accctcaagctcaaggcgcccgccaagtacgacagggacccgccgcgcgatgcgcccgac
gactccggcgaggagaagcacggcatcaagatttgcattcccttccggtccaagaacatc
cgcgacggcctgcactttgtcggtgtcgatgaaggggacctgcggtacccgcacgtctac
acgctccactcgctggagccgggcacggcctcgtgcattttcccatgcgttgacgatccc
gcctcgcgacatccttggaggatattgatcaagtgcccgcggacgctgggagacgtgttc
gaccggtcgccgactgctgcgccgccggcggccgctgctgctgcgtcgggcccgctctcg
ccaggcggtggtcgcaagcgtaaaccaggagaaccgcccacgccatcagcctctccgcct
gttttcctgtccgaggaagacaggctgatggagatgaccgtgatctgctcgggaaacctg
tcgggcgagcagatcgaccccaaagacccgaggaaaaagatcatgaccttcgagtcgcag
ctctcggcggcgtaccagatcgccttcgccatcgggccgtttgagcacattcagctgtgg
tccgagttccggaccgaggaggcggacgagaagctcggcgccaacgccgcaaagattcac
gcctactgcctcccgcgcagggccgacgaggtgcgcaacacgtgcgcccccatcgtcgcg
gccgccgacttcttcgcccccgagttcggtcggtaccccttcgagagctacaaggtcgtc
tttgtcgacgacatggtccccgagaccgtggctgccacctccatgtcgctgtgcagcaac
cggctgctgtacccggaggacatcgtcgacaccgagattgacgtcacaaggaccctcgtc
cacgccctcgcgagccagtactttggcgtccacgtcgtcccgaaccagcggtccgacatg
tggctcatcgtcggcatccagtggttcatgacggacctgttcatgcggaccctgtgcggc
aacaactggtaccggttccatctcaagacgctctcggaccggctggtcgagaccgacgtt
caccggccgtcgctccacgacctgggcgaatacctgcacgtcggcgacttcgagctcgag
ttcatgtccctcaaagccccgctggtgctcttcatcctcgatcagcgcatgtccaaaatc
cccggatccatgggcatcgtccgcatcatctcgcagatcgtgtccaacgccaacatcaac
gccacgatcgagagcacctcgctctccgacgccgacttccggagggcctgcgagaagaag
agccagtaccgcccggacgagctgtggcagcagtgggtgcacggcgcgggctgccccaag
ctgctcatcaagcagcgtttcaacaagaagaacctgaacgtcgacatcgtcatcacccag
acccaggctcgcgacagcgcccagcccaaagctatcaccaaggacgagttcctgaaggag
ctgctggaagaggtgcacgaggtgtgggcgggaacggtgcccaagctcttcacggggccc
ttcacggtccgcatacacgaggccgacggtacgccttatgagcactacctggccattacg
gacaaggacaagctggggacgacgctccagatcgcgtacaacacaaagtacaagcgcatg
aagcgtaccaagaaggccacggcggccgcggcggcagccgccgcggccggcggtaacgcg
gccgaccaggaggacgacgtcgtctacttcaacatgctaggcgacgtgctcatgtcccaa
agggacgtggagaactggggccttcaggactggtccgaggccgtgcagcaagccatggac
caggagtcgtacgagtggatccgcctcgactgcaacttcgagtggttgtgcgagatgatc
accgacatgccggggtacatgtacctggctcagctgcagcaggatcgcgacgtcgtcgcc
caccaagacgccatgctcttcttcaagcgcggccgccgccacggcgtggcctcgaccatc
gaaacccgcaccgccatggaccgccggtactaccacggcatccgcaccatggcgatcgag
gatctgcccaagcaggccgacgccgacctcaactacatcggaaccgcccagctcattctc
ctgttccgtcacttcttctgcgatcgcatggtgggcaagaacggaagcgtcacgtacccg
cccgtgcccaacgacttcgccgacaaggcgcaatacgccgtccagtgcgccctgcccgcc
gccattgcccgcacccgcgaaaacggccgctgctcgcgccaggcccgcaacttcctgctg
gacctgctgctgttcaacgacaactcggagaacgattactcggaccacttctacatcgcc
aagctgctcgacgccctcaccacgtccatcatccccgacaactggcacggcgagagggat
ctgtactcgagcctcgggtccgacgaggacgacgagctggagctgaagcgtttcatcgag
aaggccatcgaggaaatcgacaagtaccgccgcatggacgagtggacctcgacgtaccag
aacatctggacccgcaccgccctgcgctgcaagatgcgcctcatgaaggccaacgttatc
ccgaccgccccgctcgagtttgtccgctacctccaagacggcaaccatgatctcattcgc
atcgaggcgttcgactgcctcgtcgagctcggcatgctggccaaggtctccatcacgcgg
ctgctcctcgcctgcgtgagcggcgatccctcgcctttcgtgcgcgatcgtctgttcaag
atctttagcaagggcatggccctggtcgccctcggcgagaccaaggcggcccagcaaaag
cccaaagaggacatcctcgatgatggcggtttggtcgttgagctgggcgaggccgagatg
cagcagcggaggcttgcggcgacccggaaccagagcatccaagcggcgcttaccgccctc
aaggaggagctccggggcagcatcgagctgcaggaggccatgtggacggccatcgagtcg
cccatcatcagcgcgcgcgagaagttccagctgctgacgctctgctcggccatgttcgag
caggacgactcgctgctcttgacgttcaactatcccaaggtctggaagtgcacgagggtg
ccctctttcgacgagagcccgttcgcgtcgtctacgcaccgcgccaacgtccggaaacgc
tgcatggtcaagttctcaacgcagtaccgcaccgtgccgcgccgcaagtacgctccggaa
cccgccgcccctccgctgccgtgggagcccaaaccgcccgaggtcaagaagatcaagctc
agctccaagccgtctttcggtccctcatccggcggcgccgccacccctcaaacccccggc
ggagccgtccggagagactccatctccgtcaccctcacccgcccaacagcctctgccgcc
gccgcggtggccaccccggccccgccgtcggattccatcgccgtccaacccctggcccgc
gtgtccgctaccccgtcaatcgcgtcatccccgcctccttcttcttctgctgccagcctc
gtcctgccgtcgctgcacccatcaagcgccgcgaagccgtcgctgggggggccttcttca
gcgcagcggcccaagccgccgaagaagcggaagagcgacgagggtgacggccacggcgat
cgacctatcaagaagctggccaccgccaacggccggccgaggaagattgtcaggctgcgc
ttcacggcctgggataggctgcccggaaggatccgggagaagattcgcgccgcgaaagcc
gccgctcgggcccccgccgcttcttccacgaccatcgtcgccaccccgaccgccaaccgg
accccgctgcccgggcacagcggctccggctccggcagcggcagcggcgtctccgcctca
ccctccgttgatcatcgccacggcccgcaagggacgaacggcaacggcaacggcaacggc
ttgtcgtcggccatcaagaagcgcaagccccttccctcggcggcgcctcagcatcacggt
cagcccccggcggggacagcggcgtcggcgacggccccgcgtcactcgccctcgccgatg
agcacaccggctgcgaagccggcggtgggagggcatgttgggacgggggagccgaagaag
aaggttatcaagctgaagctgaaaccttctgtccacgcaacgccgccgcaaacgccgagg
tga
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integrated database retrieval system
