Remersonia thermophila: 98123454
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Entry
98123454 CDS
T10833
Symbol
VTJ83DRAFT_253
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
rthe Remersonia thermophila
Pathway
rthe03013
Nucleocytoplasmic transport
rthe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98123454 (VTJ83DRAFT_253)
09122 Translation
03013 Nucleocytoplasmic transport
98123454 (VTJ83DRAFT_253)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98123454 (VTJ83DRAFT_253)
03041 Spliceosome [BR:
rthe03041
]
98123454 (VTJ83DRAFT_253)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
98123454 (VTJ83DRAFT_253)
Spliceosome [BR:
rthe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
98123454 (VTJ83DRAFT_253)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Rootletin
TSC22
KIF21A
SPATA1_C
XRCC4_CC
Casc1_N
Motif
Other DBs
NCBI-GeneID:
98123454
NCBI-ProteinID:
XP_070869606
JGI:
Remth1_253
LinkDB
All DBs
Position
1:complement(join(889164..889205,889265..889508,889578..889936))
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AA seq
214 aa
AA seq
DB search
MTTEARITDPSLAAVIETSRAAREQAQALVDLIAQATAVDNNAPIPGDVLTEISRQQKLL
ITSIAHLRGLHRAAHFRARDTKSKTAEARHEVDVLHLQLQNLYYEQRHLEGEIAACEGFE
HTYQQLPLIPVEDFLAQHPEHAEDDENALMVARINHERAEREALEQQRLELQKRKQKLIA
ENKKRRDDLANLDKDLEKFIDAAKPIQKMFEKVV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaggcgcgcatcacggacccgtcgttggccgcggtcatcgaaacgtcacgg
gctgcccgggagcaggcccaggcgctggtcgacctgatcgcgcaggccaccgccgtcgac
aacaacgcaccgatccctggcgacgttctgaccgagatctcgaggcaacaaaagctgctt
attaccagcatcgcgcatcttcgtgggcttcaccgggccgcccatttccgcgcgcgcgac
accaaaagcaagaccgccgaggcccggcatgaggtggatgtgctgcacttgcaactacag
aacctgtattacgagcaacggcacctggagggagagattgccgcctgcgagggcttcgag
cacacataccagcagcttccgctgatccctgtcgaggactttctcgcacagcaccctgag
cacgccgaggacgacgagaacgcacttatggtggcgcgaatcaaccacgagcgggccgag
cgggaggctctcgagcaacagcggctggagctgcagaagcggaagcagaagctgattgcc
gagaacaagaagcggcgggatgatctggcaaatctggacaaggaccttgagaaatttatt
gacgctgccaaacccattcaaaagatgttcgaaaaggtggtgtga
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integrated database retrieval system
