Remersonia thermophila: 98123472
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Entry
98123472 CDS
T10833
Symbol
VTJ83DRAFT_2546
Name
(RefSeq) hypothetical protein
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rthe03036
]
98123472 (VTJ83DRAFT_2546)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
98123472 (VTJ83DRAFT_2546)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
zf-HC5HC2H
PHD_2
DUF4769
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
98123472
NCBI-ProteinID:
XP_070869086
JGI:
Remth1_2546
UniProt:
A0ABR4DLB3
LinkDB
All DBs
Position
2:complement(join(3958737..3959814,3959882..3960669,3961050..3961134,3961289..3961671,3961716..3963920))
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AA seq
1512 aa
AA seq
DB search
MSANTRTTRSRFSSPQVPAHGGNDAPTSSKGANGEEQQKTFMQRWLEPPVQVKASYQEAG
LMRGGIFENMAPLGTLPKVGLFKKTAAPSPIAASAATTPDDGTKTPVRRRIVIKARQPAV
PETPTPAPPPPPARASAPAPAPAPAPAPAPAPAPAPAPAPASAAEEDETQSDATEEEDID
DEKTEEQDDDDDEEEDGGAEIVDREVQEARSSMMAAGRRARRAVSAADTDDDQDWAPGRP
GSRAGPRTRRSASRASTRSQQSAASTAAALSLKEVVGTVVEAAVGEALSHYRYPTAWALR
TLFDENSHKADFLTLTQRVFAQTANADEFEDFARQIQAKKREGKKDNKALGHFVSDAEDP
PHPPKRASYGTLVKFDVSTLHLERKRRGSKVPKKGKQAAAAAAAATTTTTTTTTTTTTTT
TTSADESAASGEPAKEPDAEPESELPPRKKRKSTRQPHQEAPTPTTSAKGKMPAAAKTNG
ALSTAAGGGSGGGSSSSSSKNSNNNGRNSHNKANVVETPSRRRTRARSSSSSISSLSSAL
SLTPPGHGHEDKENGAPSQERDDDTPSRSSPVPAASVASAEPITGTKRRRMNAPRKARNA
SNKTLSSRQQSPAAASTNAAATTGVATQQSAAAAAAAAATNAASSVAVATPAPASSSSSA
DAEDQPYAMPAMVDSPWFPPLPGSKKGSKAANLGIVFPAKFSDKAEEPSEQELKRRAHTA
EARRHTATVPIPMSSAQQGQGGPLGVHARRCIAPAPRPPAHPHDGPATRPRSSLAATTAQ
PASSFSEHPTPVREGRSTRSSLKRTHDESEDPALHQQHQPSSPATLNFPGSDAAPSTAPN
SRAGTPALRAPKRTRTGLRVKNSPMKKKNGPSAGIPRASGERSSPVGNAREDDNDDYCSS
CGGNGELLCCDGCTRSFHFTCVDPPLAKDAMSDEWFCNVCRSRRDPAHLPVRTGAFSMLL
EKLDMRNASAFRLPAAIRDRFEGVRTGPDGEYEEVTQPVKPTRKKKADEEVGPDFFTRLR
DNDGNPVICHGCQRGSSAERALIIPCSACGLHWHLDCLDPPMAQPPVLRTWKCPLHTDDL
LAKLPAQLAPAHRFRKIKDAPVIRPIFTRGFANNGYIDIDFDDDAEESGWRDIESFGRTV
RLSEKGIKLDFLSRLRERHPAPKPAAPEPAQPVSMVAAVPAPSFQQVSLEAQQAALSLAA
LATTQARDGDGGDDDQRGLSALIDAMVNDADPNVIHLMSRADATRIANGQLSKLDQQSLR
AMLARAESVAEGIRTLLAASSDEKQQQQQQQQQQQQKPATADEDTREDRSVVVSVASATA
VSGGDDDEKEGAAASCAPGTTETRLGGSVSEDVDMTDDDKHATAAAAETEAANADTTMLD
AAAKPSRLIAAASPAATDDVPAMTHGEKTPPAHGGDDEGLDSPNQSPAAPPPLLVLDGHA
GDDATAAGAAAAGDGKAEEDADAEAGENSPATPTKTAALGIRGGEPVVVGEDERDGEVVV
GGADEVGGEGKV
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaacacgaggactacgcgatcgcgcttctcgagcccgcaggtgccggcgcat
ggaggcaacgacgccccgacgagctccaagggcgccaacggcgaggagcagcaaaagacc
ttcatgcagcgctggctcgagccgcccgtccaggtcaaggctagctatcaggaggccggg
ctgatgcgcggaggcatctttgagaacatggcgcccctcggaaccctgcccaaggtcggc
ctatttaagaagacggctgcgccctcgcccatcgccgcctcggccgccaccacccccgac
gacggcaccaagacgcccgtccgtcgtcgcatcgtcatcaaggcgagacagcccgccgtg
cccgaaaccccgacccctgcgcctcctccgccgcccgcccgtgcatcggcgcctgcgccg
gctcctgcgccagctcctgcacctgcgcctgcgcctgcgcccgcgcccgcgccagcgcca
gcgtcggcggccgaggaggatgaaacccagtcggatgcgaccgaggaggaggacattgac
gacgagaagacggaggagcaggacgacgatgacgacgaggaggaggacggcggcgccgag
attgtcgatcgcgaggttcaggaggctcgctcgtccatgatggccgccggccggcgtgcg
cgccgcgccgtcagcgccgccgacacggatgacgaccaagactgggcgccgggccgtccc
ggcagccgagccggccctcgcacgcgacgtagtgcgtcgcgggccagcacgcgctcgcag
caatcggcagcgtcgacggcggcggctctcagcctcaaagaggtggtcggcacggtggtg
gaggctgccgtgggagaggccctgtctcattatcggtaccccaccgcctgggcgctccgc
accctcttcgatgaaaattctcacaaggccgatttcttgaccctcacgcaacgcgtcttt
gcgcagacggccaacgccgacgagtttgaggactttgcccgccaaatccaggccaagaag
cgcgagggcaagaaggacaacaaggcccttggccacttcgtgtcggacgcggaggacccg
ccgcatccacccaagcgcgcctcttacggcacccttgtcaagtttgacgtgtcgacgttg
catctggagcgcaaacgtcgcggcagcaaggtccccaagaaggggaagcaggcggcggcg
gcggcggcggcggcgacgacgacgacgacgactacgacgacgacgacaacaacaacgaca
acaacgtcggctgacgagagcgctgcatccggcgagccggccaaggagccggacgctgag
cccgaatccgagctgccgccgcgcaagaagcgcaaatccaccaggcagcctcatcaggag
gctcccacccctaccacgtcagcaaagggcaaaatgcccgccgcggccaagaccaacgga
gctttgtccacggctgccggcggcggcagcggcggcggcagcagcagcagcagcagcaag
aacagcaacaacaacggcagaaatagccacaacaaagccaacgttgtggagacgccgtcg
cgtcggcgcacgcgggctcgttcatcatcgagcagcatttcgtcgctttcgagcgcgctc
tccttgacgccgcccggccacggccacgaggacaaggaaaatggggcccccagccaggag
cgggatgatgacaccccctcgcgctccagccctgtgccggccgccagcgtcgcctccgcc
gagccaatcacaggcaccaagcggcgtcggatgaacgcaccgcgcaaagcccggaacgcc
agcaacaagactttgtcctcccgacagcagtcgccagctgccgcgtccaccaacgctgcc
gcgaccactggcgtcgcgacacagcaatccgccgccgccgccgctgctgctgctgccacc
aacgctgcatcttctgtcgccgtcgcgacgcccgcgcctgcatcgtcctcttcttccgcc
gacgccgaagaccagccctatgcgatgcctgcgatggtcgactcgccatggtttcctccg
ctccccggttccaaaaagggctccaaggcggccaacctgggcatcgtctttcctgcaaag
tttagcgacaaggccgaagagccttcggagcaggagctcaagaggcgcgcccacaccgcc
gaggcccgcaggcacacggccaccgtccccatccccatgagcagcgcgcaacaaggccaa
ggcggacccctcggcgtccacgcccgccggtgcatcgcaccggcaccgcgcccgcccgcc
cacccccatgacggccccgcgacgcgtcctcgctcctccctcgccgccaccacggcccag
ccggcctcctccttctcggaacaccccacgccggtcagggagggccgcagcacccgctca
tcgctcaagcgcacccacgacgagagcgaggatccggccctgcatcagcagcaccagccg
tcgtcccccgccaccctcaacttcccgggctccgacgccgcgccgtccacggcgcccaac
tcgcgcgccggcactcctgccctgagggcccccaagaggacgaggacgggcctccgggtg
aagaactcgccgatgaaaaagaagaacggcccatctgccggcatccctcgtgccagcggt
gagcggagcagccctgtgggcaatgcacgcgaggacgataacgatgactactgctcctcg
tgcggcggcaatggcgagctcctctgctgcgacggctgcacccgctcgttccacttcacc
tgcgtcgacccgcccctggccaaagacgccatgtccgatgagtggttctgcaacgtgtgc
cgctcccgtcgcgatccggcgcacctccccgtccgcaccggcgccttcagcatgctcctg
gagaagctcgacatgagaaatgctagcgccttccgcctgccggcggccatccgcgatcgc
ttcgagggcgtccgcaccgggcccgacggagagtacgaggaggtgacgcagccggtcaaa
ccgaccagaaagaagaaggccgacgaagaggtgggccccgacttcttcacccgcctccgc
gacaacgacggcaaccccgtcatctgccacggctgccagcggggcagctccgccgagcgc
gccctcatcatcccctgcagcgcctgcggcctccactggcacctggactgcctcgacccc
cccatggcgcagcctcccgtgctgcgcacctggaagtgccccctgcacacggacgacctc
ctcgccaagctgccggcccagctggccccggcccaccgcttccgcaagatcaaggacgct
cccgtcatccgccccatcttcacccgcggctttgccaacaacggctacattgacatcgat
ttcgacgacgatgccgaggagagcggctggcgcgacattgagtcgtttggccgcaccgtg
cgcttgtcggagaagggcatcaagctggactttctgtctcgcctccgcgagcgccatccc
gcgcccaaacccgccgcgcctgagcccgctcagcccgtgtccatggtggctgccgtcccg
gcgccgtcgttccaacaggtctccctggaagcccagcaggccgctctcagcctggcggcc
ctggccaccacccaggcacgcgacggcgacggcggcgacgacgaccagagaggcctctcg
gccctgatcgacgccatggtcaacgacgccgatcccaacgtcatccatctcatgtcgcgc
gccgacgccacgcgcatcgccaacggccagctgagcaagctggaccagcagagcttgcgg
gccatgcttgccagggccgagtcggtggccgaggggatcaggacgttgctggctgcctcc
tcggatgagaagcagcagcagcagcagcagcagcagcagcaacagcagaagcctgcgacc
gcagatgaggacacacgggaggacaggagcgtcgtcgtgagcgttgcaagcgcaaccgcg
gtttcggggggtgatgatgatgagaaggagggtgctgcggcgtcatgcgctccgggaacg
acggaaacaaggcttggcggtagcgtcagcgaggatgtggacatgaccgacgacgacaag
catgcgacggcggccgccgccgagaccgaggctgccaacgccgacaccaccatgctcgac
gcggccgccaaaccctcccgtctcatcgcggccgcgtcgcccgccgccaccgacgacgtc
cccgccatgacgcacggcgagaagacgccccccgcccacggcggcgacgacgagggcctc
gacagccccaaccagtcccccgccgcgccgccgcccctgctcgtgctcgacgggcacgcc
ggcgacgacgccacggccgccggcgccgcggccgccggggacggcaaggcggaggaggac
gccgacgccgaggccggcgagaacagcccggccacgcccaccaagacggccgcgctgggg
atcaggggaggcgagcccgtcgtggtgggcgaggatgagagagatggggaggtggtggtg
ggcggcgccgacgaggtcggcggggagggcaaggtttga
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integrated database retrieval system
