Remersonia thermophila: 98123474
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Entry
98123474 CDS
T10833
Symbol
VTJ83DRAFT_2548
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rthe Remersonia thermophila
Pathway
rthe03082
ATP-dependent chromatin remodeling
rthe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
98123474 (VTJ83DRAFT_2548)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
98123474 (VTJ83DRAFT_2548)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rthe01009
]
98123474 (VTJ83DRAFT_2548)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98123474 (VTJ83DRAFT_2548)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98123474 (VTJ83DRAFT_2548)
Protein phosphatases and associated proteins [BR:
rthe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
98123474 (VTJ83DRAFT_2548)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
98123474 (VTJ83DRAFT_2548)
SWI/SNF complex
98123474 (VTJ83DRAFT_2548)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
98123474 (VTJ83DRAFT_2548)
PBAF complex
98123474 (VTJ83DRAFT_2548)
SWI/SNF complex
98123474 (VTJ83DRAFT_2548)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
TH_ACT
Motif
Other DBs
NCBI-GeneID:
98123474
NCBI-ProteinID:
XP_070869088
JGI:
Remth1_2548
LinkDB
All DBs
Position
2:join(3970114..3971976,3972077..3972223,3972288..3972665)
Genome browser
AA seq
795 aa
AA seq
DB search
MAAAQALASPTAAADDTPSTMAPATTTSLSASGPAPTSAPTGAPETDTAADPSADATMTT
TTTTTTAAAAAAATTTATAAAATTAATMTATTATQRPGRDKETFQKVIIERYTTHDWVHS
SALKEAQLRMERESKETHARIGDYRQYRDFYANFPARLYGEGYRGFGNGYTENGGLTKIV
YPSQRPRPGRRTTPALKFSKKDMKKQAEQHEELVPIRIDVDWDRIKLRDTFTFNLHERLV
TVDLFAAQLLEDMGLNPATTEKPVYDQVVQQMQEQLNDFYPFAYSEEDALDPELPYSAYK
NDEMRILVKLNITIGAHTLVDQFEWDINNPLNSPEEFAASMARDLSLSGEFTTAIAHCIR
EQAQLFTKSLYSIGHPFDGRPVEDADLVAAFLPSPLPSVFRPQQQAKDYAPYLYENTEAE
LERTETMFSREQRRQKRAVNRRGGPQLPDLKERQRTIRTAIVSSVLPGAAQHVDDTRLFK
RAPGAPGTGRGGKRAARDGDLSDSDLSDDSAPDSPAMTQVQQGTARTRGMRGAATAAAQR
MANLGRSETPEATIHHHETRTSRRFGREATREQTEEPLRHVVTLKVSPARLKKLLRDLES
RPTPHASSATSTPVAHQRTPSPQPPAPANPPSSSSSTKPASAAAPTLQSQLGRVPAPPPG
PSGTAPAQPPPPPPEWLTTALAQLHKSYPTDAFEAIMRYCAINTETNTFVQLPLPPNEPV
PANVSFAWLPRIRCRDCPGKSYTAGPDMTVQNFEVHLKNRAHRERVLARLKGGSGGGSGS
GSGGGGGGGGSGGAS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcccaggccctcgcgtcgcccaccgcggccgccgacgacaccccctcaacg
atggctcctgcgacgacgacatcattatcagcctcgggtcccgctccgacctccgctccg
accggcgcaccagaaacagataccgctgccgatccctcggccgatgcgacgatgacgacg
acgacaacaacaacaacagccgcagcagcagcagcagcgacgaccacagcgacggcggcg
gcggcgaccacggcggcgaccatgacggcgaccacggcaacccaacggcccggtcgcgac
aaggaaaccttccaaaaagtcatcattgagcgctacacaacccacgactgggttcactcg
tcggccctgaaagaggcccagctccgcatggagagggagtccaaggagacgcacgcccgc
atcggcgactaccgccaataccgcgacttctacgccaacttcccggcccgcctctacggc
gagggctatcgcggcttcggcaacggctacaccgagaacggcggcctgaccaagatcgtc
tacccctcccagcggccgcgccccggccggagaacgacccccgccctcaagttcagcaag
aaggacatgaagaagcaggccgagcagcacgaggagctggtgcccatccgcatcgacgtc
gactgggaccgcatcaagctgcgagacaccttcaccttcaacctgcacgagcgccttgtc
acggtcgacctcttcgccgcccagctgctcgaggacatgggcctcaacccggccaccacc
gaaaagcccgtctacgaccaggtcgtccagcagatgcaggagcagctcaacgacttctac
ccctttgcctactcggaggaggacgccctcgacccggagctcccctactcggcctacaag
aacgacgagatgcgcatcctcgtcaagctcaacatcaccatcggcgcccacaccctcgtc
gaccagttcgagtgggacatcaacaaccccctcaactcccccgaggagttcgccgccagc
atggcccgcgacctgtcgctgtcgggcgagttcaccaccgccatcgcccactgcatccgc
gagcaggcccagctcttcaccaagagcctctacagcatcggccaccccttcgacggccgc
cccgtcgaggacgccgacctcgtcgccgccttccttccgagccccctgccctccgtcttc
cgcccccagcagcaggccaaggactacgcgccctacctctacgagaacaccgaggccgag
ctcgagcgcaccgagaccatgttctcgcgcgagcagaggcgccagaagcgcgccgtcaac
cgccgcggcgggccccagctgcccgacctcaaggagcgccagcgcaccatccggaccgcc
atcgtgtcctcggtcctgccgggcgccgcccagcacgtcgacgacacgcgcctgttcaag
cgcgcccctggcgcccccggcaccggccgcggcggcaagcgcgccgcccgcgacggcgac
ctgtccgactcggacctcagcgacgactcggctcccgactcgcccgccatgacgcaggtc
cagcaaggcaccgcccggaccaggggcatgcgcggcgccgccaccgccgccgcccagcgc
atggccaacctcggccgctccgaaaccccggaagccaccatccaccaccacgagacgcgc
acgtcgcgccgcttcggccgcgaggccacccgcgagcagaccgaagagcccctgcggcac
gtcgtcaccctcaaggtgagccccgcccgcctaaagaagctcctgcgcgacctcgagtcg
aggccgacgccgcacgcttcgtcggccacctcgacgcccgtcgcccaccagcgcaccccc
agcccgcagccgccggctccagccaaccccccctcctcctcctcctccaccaaacccgcc
agcgccgccgcgcccaccctccaaagccagctcggccgcgtccccgcccctccgccgggc
ccctccggcacggccccggcccaaccaccgcccccgccccccgaatggttgaccaccgct
ctcgcccagctccacaagtcgtacccgaccgacgcgttcgaggccatcatgcgctactgc
gccatcaacaccgagaccaacaccttcgtccagctccctctgcctcccaacgagcccgtg
cccgccaacgtcagcttcgcctggctgccgaggatccgctgccgcgactgcccgggcaag
agctacacggccggcccggacatgacggtgcagaactttgaggtgcacctcaagaaccgg
gcgcacagggagagggtgctggcgaggttgaaggggggcagcggcggcgggagcggaagc
ggaagcggcggcggtggcggcggtggtgggagcggcggtgcgtcgtaa
DBGET
integrated database retrieval system
