Remersonia thermophila: 98123511
Help
Entry
98123511 CDS
T10833
Symbol
VTJ83DRAFT_2581
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
rthe Remersonia thermophila
Pathway
rthe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
98123511 (VTJ83DRAFT_2581)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98123511 (VTJ83DRAFT_2581)
03012 Translation factors [BR:
rthe03012
]
98123511 (VTJ83DRAFT_2581)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
98123511 (VTJ83DRAFT_2581)
Translation factors [BR:
rthe03012
]
Eukaryotic type
Release factors
98123511 (VTJ83DRAFT_2581)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
98123511
NCBI-ProteinID:
XP_070869121
JGI:
Remth1_2581
LinkDB
All DBs
Position
2:join(4098874..4098909,4098970..4099054,4099126..4099175,4099253..4100389)
Genome browser
AA seq
435 aa
AA seq
DB search
MSDPNSTEAEKNIEIWKVKKLIKRLEAARGNGTSMISLIIPPKDQISRVAKMLAEEYGTA
SNIKSRVNRQSVLSAITSTQQRLKLYNKVPPNGLVVYCGEILTSEGKERKVNIDFEPFKP
INTSLYLCDNKFHTEALAELLESDQKFGFIVMDGNGALFGTLSGNTREIVQKFTVDLPKK
HGRGGQSALRFARLREEKRHNYVRKVAELAVQNFITNDKVNVAGIVLAGSADFKNDLNAS
DMFDPRLQCKVIKVVDVSYGGENGFNQAIELSSETLGNVKFIQEKKLIGKYFEEISQDTG
RVCYGIEDTLKALELGAVETLIVFENLEVTRWVLKDNNGSETILHTTKQQEQGNRDKFMD
KETGQEMEVVSQESFLEWIAEHYKDFGTTLEFVSDRSTEGNQFVKGFGGIGGILRYKVNF
EQLADVDDDDEYYDD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccccaactccaccgaggccgagaagaacatcgagatatggaaggtgaagaag
ctcatcaagcggcttgaggccgcccgcggcaacggcaccagcatgatttccctcattatc
ccgcccaaggatcaaatctcgcgtgtcgcgaagatgcttgccgaagaatacggtactgct
agcaacatcaagtcccgtgtcaaccggcagtcggtgctctcggccatcacgtcgacccag
cagcgcctcaagctgtacaacaaggttccgcccaacggcctggtcgtctactgcggtgaa
atcttgacctccgagggcaaggagcgcaaggtcaacatcgactttgagcctttcaagccc
atcaacacgtcgttgtacctgtgcgacaacaagttccacaccgaggccctggccgagctg
ctcgagtcggaccagaagtttggcttcatcgtcatggacggtaacggtgccctgtttggc
actctcagcggcaacactcgcgagattgtccagaagttcaccgtcgatcttcccaagaag
cacggccgtggtggtcagtccgccctgcgtttcgcccgtctgagagaggaaaagcgtcac
aactacgtgcgcaaggtggccgagttggcggtgcagaacttcatcaccaacgacaaggtc
aacgtggccggcatcgtgctggctggttcggccgacttcaagaacgacctgaacgcctcc
gacatgttcgaccctcgcctccagtgcaaggtcatcaaggtggtggacgtgtcgtacggc
ggcgagaacggcttcaaccaggccatcgagctgtcgtccgagaccctgggcaacgtcaag
ttcatccaggagaagaagctcatcggcaagtactttgaggagatcagccaggacacgggc
cgtgtgtgctacggcatcgaggacaccctcaaggctctggagctgggcgccgtcgagacc
ctgatcgtctttgagaacctcgaggtgacgcgctgggtgctcaaggacaacaacggctcc
gagaccatcctgcacaccaccaagcagcaggagcagggcaaccgcgacaagttcatggac
aaggagacgggccaggagatggaggttgtctcccaggagtcgttcctcgagtggatcgcg
gagcactacaaggatttcggcaccaccctcgagttcgtgtcggaccgctcgaccgagggc
aaccagttcgtcaagggctttggcggcatcggtggcatcctgcgctacaaggtcaacttt
gagcagctcgccgacgttgacgacgatgacgagtactacgacgattga
DBGET
integrated database retrieval system
