KEGG   Remersonia thermophila: 98123960
Entry
98123960          CDS       T10833                                 
Symbol
VTJ83DRAFT_2986
Name
(RefSeq) hypothetical protein
  KO
K14289  exportin-5
Organism
rthe  Remersonia thermophila
Pathway
rthe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    98123960 (VTJ83DRAFT_2986)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rthe03016]
    98123960 (VTJ83DRAFT_2986)
   03036 Chromosome and associated proteins [BR:rthe03036]
    98123960 (VTJ83DRAFT_2986)
Transfer RNA biogenesis [BR:rthe03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    98123960 (VTJ83DRAFT_2986)
Chromosome and associated proteins [BR:rthe03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     98123960 (VTJ83DRAFT_2986)
SSDB
Motif
Pfam: Exportin-5 Xpo1 IBN_N
Other DBs
NCBI-GeneID: 98123960
NCBI-ProteinID: XP_070866867
JGI: Remth1_2986
LinkDB
Position
3:join(618503..619366,619423..619611,619685..620569,620630..620733,620794..621052,621129..621271,621337..621938,622024..622790)
AA seq 1270 aa
MATIAGNEAAAGGGGEAIMAKIQEALKVVHSPYSPNQARQEAQAFLEDVKTLDEAPSHGF
ALAFNKPQEPIVRHYGLSLLEHALKRRWEDYSSEHRGYLRQWILQLAETVAPDDPGYLRN
KIAQLWVELAKRDWVAGWMNMDELLVRLWRGSDLPVHKHFVLQILETLSDEIFNGDDNVV
ALREGALSKACVEIFTPAAILTEAFPNRQHGPEVRFEADGWLTRVTQLVSGWLNGALGQS
EEATVCVVKALNVLNSIAPWAIPKALKDVGCRDVMCSCLAAPSVPVQKAALEALHSLYSR
SSFTEEEFVDLVIPMYSEVMVDLYRRLFEWSVVDPEDIDDDKYTFAKKFSEMLHSLGNYL
DRRFPAIPPQTNIRAFMQLLLLVAQSQSLVVSIPILLTFTRLLGHRVLGPAIAEMPIIGD
LLELCSARLIRYESFPEDSTDPVYVLLCEDTDTIPERHAFLGNYRRYCCSIVESIIQLKL
SDAFSHLLARTERALSTLYDGQPPLNPANYSKTSFPVLTVDGCATVIEAALKGYDKWRTS
RNRTSEEQEQAAAVEAFFENWCGQLLEMQFEDPLIRKRILQLLVSFSTRALDSKPAVMLR
VLEHILMTWPALQPEHRLYNDAIRDLQNESTVELQRLASKMPDPLLDVYEQLEAKVQELI
TSGTLDEKRQVAYQSFLFIIIHRATRIDPGLRLTKLSAFVEPVKDQWRNESLKQALSSYG
GFCELVGLDKAQKYLAQRRIHEIADWGSAELDAEGLALQAELEQRQSTLPLRVTKAFLTY
SVERIEKNSPPYQVSCTLWQDGFQLILPELLKFLSYAHASHNPASWSLLPPEMQPIVGRL
MSDRFWQAGISEGSKDDFYARVMGKKNTLEGFASTIRSTVRFVRETCYAIIYCMSRLDTQ
FYGFLELPEPLANALFVDSGHLSSHQVIHLLTLARYLVDNCPVELRDHFVPPILATCFNH
MDAKISSEWEKLGQRETVQAAGDELTEEMKAESILRQLTYSAVLMVADVLDPVRVASPAS
ASDGAEDAAPGGVKYPPFRKFCLMNTKIAVPLLVFCQHAIRMHDGRCCGIVLRIFRSIIP
EFVPSELANAPKDPGHTAPLDDFPIPWETAREIMEFISTDVMRAAIASLHDPYFVDLQKD
LGGLIAQVLANYSRLTPAPRNTLSLLPSLKADDIDRTIRLVSQPGLHSRQQRALVLELLE
DVKGVRISELGKIRSGGTRPGSSRGGKKSARSKMAQEFMTPNEGRQAGEPGVRNKTPDLE
GMAGMFDEAS
NT seq 3813 nt   +upstreamnt  +downstreamnt
atggcgacaatagcgggcaacgaggccgccgccggcgggggcggtgaggccatcatggcg
aaaatccaggaagccctcaaggttgtccacagcccgtactcgcccaaccaggcgcggcaa
gaagcccaagcgttcctcgaagacgtcaagaccctcgacgaggctccgtcgcacggcttc
gccctcgcgttcaacaaaccccaagagcccatcgtccgccactacggcctgtcgcttctc
gagcacgccctgaagcgcaggtgggaagactacagctcagaacaccgggggtaccttcgg
caatggatcctccagctggccgagaccgtcgcgcccgacgacccggggtacctccggaac
aagatcgcccagctctgggtcgagctggccaagcgcgactgggtggcgggctggatgaac
atggacgagctgctggtgcggctctggcgagggtccgacctgccggtccacaaacacttc
gtcctccagatcctcgagacgctctcggacgagatcttcaacggcgacgacaacgtagtc
gcgctccgcgagggcgccctgagcaaggcctgcgtcgagatcttcacgcccgccgccatc
ttgacggaggccttccccaaccgccagcacggccccgaggtgcgcttcgaggccgacggg
tggctcacccgcgtgacccagctcgtcagcggctggctcaacggcgcgctgggccagagc
gaggaggccaccgtctgcgtcgtcaaggccctgaacgtcctcaactcgatcgccccgtgg
gccatccccaaggccctgaaggatgtcggctgccgagatgtgatgtgcagctgcctcgcc
gccccgagcgtccccgtgcagaaggccgctctggaggcgttgcattcgctgtacagccgc
tcgagcttcaccgaggaagaattcgtagacctggtgatccccatgtatagcgaggtcatg
gtcgacctctaccggcggctctttgagtggtcggtcgtggacccggaggatatcgacgac
gacaagtacacgtttgccaaaaagttctcggagatgctccattcgctgggcaactatctc
gaccggaggttccccgccatccctcctcagaccaacatccgcgccttcatgcagcttctg
ctgctggtggcccagagccagagcctcgtcgtctccattccgattctcctcaccttcacc
cgtctcctgggccaccgcgtcctcggcccagccatcgccgagatgcccatcattggcgac
ctgctcgagctctgcagcgctcgcctgatccgatacgagagcttcccggaagattccacc
gaccccgtctacgttctgctgtgcgaagacaccgacacgatccccgagcgccatgctttc
ctgggcaactatcgtcggtactgctgctccatcgtcgagagcatcatccagcttaagctg
tcggacgccttctcgcacctcctcgccaggacggagcgcgccctgagcaccctctacgac
gggcagcctccgttgaaccctgccaactactccaagacgtcgttccccgtgctgaccgtc
gatggctgcgcgacggtcatcgaggccgccctgaagggctatgacaaatggaggacgtcg
cggaatcgcacttcggaggagcaggagcaagccgccgccgtcgaggcgttctttgagaac
tggtgcggccagctgctggagatgcagtttgaggatccgctgattcgcaagcggattctc
cagctcttggtgtccttctccacgcgggccttggattcgaagccggccgtcatgctccgc
gtgctggagcacatcctcatgacgtggccggcgttgcagcccgagcatcggctttacaac
gacgccatcagggacctccagaacgaaagcacggtcgagctgcagcggctggcatccaag
atgcccgatccccttctcgatgtctacgagcagctggaagccaaggtccaggagctgatc
acatcgggaaccctcgacgagaagcgccaggtggcctaccagagcttcctcttcatcatc
atccatcgtgccactcgcatcgaccccggcctgcgcctcaccaagctgtctgccttcgtc
gagcccgtcaaggaccagtggagaaacgaatcgctgaagcaggccctgagctcctacggc
ggcttctgcgagctcgtgggtctcgacaaggcgcagaagtatcttgcccagcgtcggatc
cacgagattgccgactggggctcggccgagctcgatgcggaggggctggccctgcaggcc
gagctggagcaaaggcaatcgacgctccccctccgggtcaccaaggcgttcctgacgtac
tccgtggagaggatagagaagaactcgcccccgtaccaggtgtcttgcactctctggcag
gacgggtttcagctcatcctgcctgagctgctgaaattcctaagctatgctcatgcttcc
cacaacccggcgagctggagcctgctccctcccgagatgcagcccatcgtgggacgcctc
atgtcggaccggttctggcaggccggcatctcggaggggagcaaggatgacttttacgcc
agggtgatgggcaagaagaacaccctggaagggtttgcgtcgaccatccgcagcaccgtg
cggttcgtccgggagacgtgctacgcgatcatctactgcatgtcgcggcttgacacgcaa
ttctacgggttcctggagctgcccgagccgctggccaacgccctctttgtcgactctggc
cacctgtcatcgcaccaggtcatccacctcctcaccctggctaggtaccttgtcgacaac
tgccccgtcgagctgcgcgaccacttcgtgccgcccatcctggccacctgtttcaaccac
atggacgccaagatcagctccgaatgggagaagctgggccagcgggagacggtccaggcc
gccggggacgagctgacggaggagatgaaggcggaaagcatcctgcggcagctgacatac
tcggcggtgctcatggtcgccgacgtgcttgatccggtccgcgttgcatccccggccagc
gcctcagacggggccgaagacgcggcgccgggcggcgtcaagtacccaccgttccgcaag
ttctgcctaatgaatacgaagatcgccgttccgctgctcgtgttttgtcagcacgcgatc
cgcatgcacgacgggagatgctgcggcatcgtgctgcgcatcttccgctccatcattccc
gagtttgtcccgtcggagctggccaacgcgcccaaggaccctggccacacggccccgctg
gacgacttccccatcccgtgggaaacggcaagagagattatggagttcatctcgacggac
gtgatgcgggcggccatcgcgtcgctgcacgacccgtactttgtcgacctgcagaaggac
ctgggcggcctgatcgcgcaggtcctggccaactactcgcggctgacgccggcgccgcgg
aacacgctctcgctgctgcccagcctcaaggcggacgacatcgacaggacgatccgcctc
gtgtcccagccggggctgcactcgcgtcagcagcgggccctcgtgctcgagctgctcgag
gacgtcaagggagtcaggatctcggagctgggcaagatcaggagcggcgggacgaggccc
gggtcctcgcggggaggaaagaagtcggcacgcagcaagatggcgcaggagttcatgacg
ccgaacgaggggcgtcaggcaggggagccgggcgtgcgaaacaagacgcccgacttggaa
ggcatggcaggcatgtttgacgaggcgagctag

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