Remersonia thermophila: 98124034
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Entry
98124034 CDS
T10833
Symbol
VTJ83DRAFT_3051
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
rthe Remersonia thermophila
Pathway
rthe00100
Steroid biosynthesis
rthe00909
Sesquiterpenoid and triterpenoid biosynthesis
rthe01100
Metabolic pathways
rthe01110
Biosynthesis of secondary metabolites
Module
rthe_M00102
Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
98124034 (VTJ83DRAFT_3051)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
98124034 (VTJ83DRAFT_3051)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rthe01006
]
98124034 (VTJ83DRAFT_3051)
Enzymes [BR:
rthe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
98124034 (VTJ83DRAFT_3051)
Prenyltransferases [BR:
rthe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
98124034 (VTJ83DRAFT_3051)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
98124034
NCBI-ProteinID:
XP_070866932
JGI:
Remth1_3051
LinkDB
All DBs
Position
3:join(848434..848501,848577..849636,849700..849858,850035..850157)
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AA seq
469 aa
AA seq
DB search
MGLAQQAIYFLFHPNQLRAIIQWKVWHEPVHKRDPSKETPTEKACFHYLNLTSRSFAAVI
QELNPELLMPICLFYLVLRGLDTIEDDMTIDIKEKEPLLRGFHELMEKDGWTFNGNGPNE
KDRDLLVHFDVVITELKKVKKPYYEIIKDITVKMGNGMADYALNAEHNANGVNTIADYEL
YCHYVAGLVGEGLTRLFVASDLANPKLLDRMELTESMGQFLQKTNIIRDVHEDWLDGRRF
WPKEIWSLYFDKWDDLFAPENRERALQCSSHMVLNALKHVEECIFYMAGVRDQSVFNFVA
IPQAMAIATLELVFRNPAIFERNIKITKGDACQLMTESTQNLRVLCDVFRRYARRIHKKN
DPRDPNYLAISAQCGKIEQFIESIFPTQDPQKIAAGRRHPGEQPGMDTMDAVVLVVSCVA
VMLLLGATMIGLAWLMGANMDKMVTGLGALGGNIKPPGSIADVPGRDEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcgcccagcaagccatatacttcctcttccatccgaaccagcttcgggccatc
atccaatggaaggtgtggcacgagccagtccataagcgcgacccgtccaaggagaccccg
accgaaaaggcatgcttccactacctcaacctcacctcgcggtcgttcgccgccgtcatc
caggagctcaacccggagctgctgatgcccatctgcctcttctacctggtgctgcgcggc
ctggacacgatcgaggatgacatgaccatcgacatcaaggagaaggagccgcttctccgg
ggcttccacgagctgatggagaaggacgggtggacgttcaacggcaacggccccaacgaa
aaggaccgcgacctgctggtgcactttgacgtcgtcatcacggagctcaagaaggtcaag
aagccctactacgagatcatcaaggacatcaccgtcaagatgggcaacggcatggcggac
tacgccctcaacgccgagcacaatgccaacggcgtcaacaccatcgccgactacgagctg
tactgccactacgtggccggcctggtgggcgagggcctgacccgcctgttcgtcgccagc
gacctggccaacccgaagctgctcgaccgcatggagctgaccgagagcatgggccagttc
ctgcaaaagacaaacatcatccgcgacgtgcacgaggactggctcgacgggcgccgcttc
tggcccaaggagatctggagcctgtactttgacaagtgggacgacctgtttgcgcccgag
aaccgcgagagggcgctgcagtgcagctcccacatggtcctcaacgccctcaagcacgtt
gaggagtgcatcttctacatggccggcgtccgcgaccagagcgtcttcaacttcgtcgcc
atcccgcaggccatggccattgccaccctggaactcgtcttccgcaacccggccatcttc
gagcgcaacatcaagatcaccaagggcgatgcctgccagctcatgaccgagtcgacccag
aacctgcgcgtcctctgcgacgtgttccgcaggtacgccaggaggatacacaagaagaac
gacccgcgcgatcccaactacctggccatcagcgcgcaatgcggcaagatcgagcaattc
atcgagtccatcttccctacccaagatccccagaagatcgcggccggtaggcggcacccg
ggcgagcagcccgggatggacacgatggacgcggttgtcctcgtcgtgtcttgcgtggcg
gttatgcttctgcttggagctacgatgattggactcgcctggcttatgggtgcaaacatg
gacaagatggtgaccggactcggcgcgctgggaggcaacatcaagcctcctgggtcaatc
gccgacgtgccgggccgcgacgagctgtga
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