Remersonia thermophila: 98124102
Help
Entry
98124102 CDS
T10833
Symbol
VTJ83DRAFT_3112
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
rthe Remersonia thermophila
Pathway
rthe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
98124102 (VTJ83DRAFT_3112)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rthe03036
]
98124102 (VTJ83DRAFT_3112)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
98124102 (VTJ83DRAFT_3112)
SWR1 complex
98124102 (VTJ83DRAFT_3112)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HSA
Motif
Other DBs
NCBI-GeneID:
98124102
NCBI-ProteinID:
XP_070866993
JGI:
Remth1_3112
LinkDB
All DBs
Position
3:1061792..1067248
Genome browser
AA seq
1818 aa
AA seq
DB search
MTEIASPSPTTCTPRDPLASSGDDDANARLNNNHEGANNDGNNNNNNSSSSSSSKTVDDL
APSTPSREAPVPAVKEEPDIAPPETNGATHHDSPEDDEKPPSEDPATQNDLTQTPQPTNG
VRRSRETPGTADGPPAKRRRTRDATPNSAARKPKPESPPWKKVEADGPSTFITEDGRRKS
GRINTVPLELQPSDKRITRQVLHGKQASPPKGRHASANGHHPPTPASSSARRPSVSAKKQ
PPSKPAPSKAPPKKPAQEAKPSPARTRRRSPSPRRTATPAKPQPQGTRRSARNLRGTDDY
AARASAAARPPLTEIPLVHRDQANVRPKLGPSFEEYFERALEIPVEQGGLFVPSEDGPRQ
TDESLVQDAKLILRVEKEVEPGGILAPERCSVFDPEPAEEPPRQWAHMDHLTKTMSNFRK
LMLLEQQRHRATAKRLAVACEAEWRRRNPQPKTAEEIEQEQTELNRARWRHVNKILAGTW
ENVKAEVNRRRLADWEAEEQRRVKAALNQAVSASELKLQARQARFDTEELSDEELDDVDV
VVDDDDDDDDDDDDLLSDEQDADGGAEDSGDASDEESEDEDNMSSSDDEEDEESELSDEG
LTQEQLREKYANLPDLNEMIDKVAPDDATAEAAGDDDTSDESIDMDDDLGSSEEEEEEEE
DEEDVESDTSDESDEPAGLLGLFFGKSELKKLKAEAAAAEQSASKDVDMDEAAAVETTTQ
DVDMAEAEAAEPPQANGDGGPQEDQPAASSAEEKPAAAPPGDEAQQEKLLHLSRTPAPSD
EAAEPPPAEAPTNAEPGDSAVVITDGTAPTETISKPSPNHAEAAIDVSMVDAPSAPSAPS
APLRQPRESEALAVPAIQHPSPETEPMTNAHSSSRSQSPRPPSDDTKPTEAETPASASLL
NAPKTDSRSTSPQPVVPRTEIPFLLRGKLREYQHHGLDWLASLYANNTNGILADEMGLGK
TIQTIALLAHLACYHEVWGPHLVIVPTSVMLNWEMEFKKWCPGFKILTYYGNQEERKRKR
QGWTNDDVWNVCITSYQMVLQDQQVFRRRRWHYMILDEAHNIKNFKSQRWQTLLGFNTHS
RLLLTGTPLQNNLTELWSLLYFLAPPENGEGGFVDLQEFHNWFSRPESQILESGREQLDD
EARAIIAKLHKVLRPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLSRADTRQ
TLASGNYMSIINCLMQLRKVCNHPDLFVDRPIMSSFRMQRSVAAEYEADARLVQKRLWEP
TPMKTVNLSFLNMVPTLYESMSAAHADRIAQLSTHRVLLDLRDAQRMRARNASHELDPAS
VKSNLVFLESAARWDRFEELQHCVYVNALRRQQRPIYGRRLVEMLTLDTHRRPHKPRPKV
PQKIMSWFEEDSFLLRNAIPTLQQRADSMETIITKFACVTPAVVTGDMTRLLLGDQGVAA
FREEDLRLSAPVRHAPYMPPERPPDPWHEARMRLSIQFPDKRLLQYDCGKLQVLDKLLRR
LQAGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQMLTDRFNHDPRILCF
ILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEA
NILRKAGQKQMLDDVVIQEGEFTTDYFHKLAVRDVIGTDGEVRANEDDVAANAAMDRVLG
GGPDGKAAPRNVGRALEQAEDQEDVAAARVAEKETQQDDADFLEPQAGAASGTSSARAGG
TPREGTTEPGATTGGAAGGEANEGKADGVVEYNAFGERMGTIDDYMLRFMAKALEGTALE
LPKDKKKSKKKGKDTRKR
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgacagagatcgcgtcgccgagcccaacaacatgcacgccccgcgatccgcttgcatct
tccggcgacgacgacgccaacgcccggctcaacaacaaccatgaaggtgccaacaacgac
ggcaacaacaacaacaacaatagcagcagcagcagcagcagcaaaaccgtcgatgacctt
gccccatccacgccgtcacgagaagctcccgtgcccgccgtcaaggaggagcctgacatc
gcaccgcccgagacaaacggagctacccaccacgacagccccgaggatgacgaaaagccc
ccgtccgaggatcccgcaacgcagaacgacctgacccagacaccgcaaccaaccaacggg
gtccgcaggtcccgcgagactccgggcaccgccgatggcccccccgccaaacgccgacgc
acgcgcgacgcgacgccaaacagcgccgcccgcaagcccaagcccgagtcaccgccgtgg
aaaaaggtcgaggccgatggcccgtccaccttcatcacggaggatggccggcgcaagtcg
ggccgcatcaacacggtgccgctggagctgcaacccagcgacaaacggataacgagacag
gtcctccacggcaagcaagccagcccgcccaagggccggcacgcttccgccaacggccat
cacccacccacccctgccagctcgtcggcccgcagaccttccgtatcagccaagaaacag
ccgccgtcgaaaccagccccgagcaaggcgcccccgaagaagcccgcccaggaggccaag
ccgtccccggcacgcacccgccgtcgctccccgtcgccccgccgcaccgccacgccggcc
aagccgcaaccccagggcacgcggcgctctgcccgcaacctgcgtggaaccgacgactac
gcagctcgcgccagcgcggcagccaggcccccgctgaccgagattccgctcgtccaccgc
gaccaagccaacgtgcgacccaagctcggaccgtcctttgaggagtactttgagcgcgcc
ctcgagatcccggtcgaacaaggcggcttgtttgtgccttcggaggacggcccgcgacag
acagatgaatcgctcgtccaagatgcgaagctgatactacgggtggaaaaagaggtggaa
cccggcggcatcctcgccccggaacgctgttccgtgttcgatccggagcccgccgaagag
cccccgcggcaatgggcgcacatggaccacctgaccaagaccatgtccaacttccgcaag
ctcatgctcctggagcagcagaggcaccgagctaccgccaagcgcctggccgtcgcctgc
gaggccgagtggcgacgacgcaacccccagcccaagaccgccgaagagatcgagcaagag
cagacggagctgaaccgggcgaggtggcgccacgtcaacaagatcttggcaggcacctgg
gagaatgtcaaggcggaagtgaaccgtcggaggctggccgactgggaggccgaggagcag
cgccgtgtcaaggccgcgctgaaccaggccgtcagcgcatccgagctgaagctccaggct
cggcaagcccgctttgacaccgaggaactctccgacgaagaactggacgatgtcgacgtc
gtcgttgacgacgacgacgacgacgatgatgatgatgacgacttgctttcggatgagcag
gacgcagatggcggcgcggaggattcaggagacgcctcggatgaggaatctgaggacgaa
gacaacatgtcttcctcggacgacgaagaggatgaggaatcagagctgtcggatgagggc
ttaacgcaggaacagctgagagaaaaatatgccaacctacctgatctgaacgagatgata
gacaaggtcgcgccagatgacgcgacggccgaggccgctggtgatgacgacacgagcgac
gaatcgatcgacatggacgacgatctcggttcttccgaagaggaagaggaagaggaggag
gacgaggaagatgttgaaagtgacacgtccgatgaatcagatgagcctgctgggctgctg
ggcctcttctttggaaagtccgagctcaagaagctcaaggccgaggcagccgccgccgaa
cagtcggcgtccaaagatgttgacatggacgaggcggctgctgttgagacgacgactcag
gacgtggacatggccgaggccgaagcggcagaaccaccccaagcgaacggcgacggtggg
ccgcaagaagaccagccagcggcgtcgtcggccgaggagaagcccgccgcagcgcctccc
ggcgatgaggctcaacaggagaagctcctgcatctctcgcgcacgccggcgccgagtgat
gaggcggccgaaccaccaccagctgaagctcccacgaatgcggagccgggcgacagcgcg
gtggtgatcacggatggcacggcgcccacggagacgatatccaaaccctccccaaaccat
gccgaagcggccatcgacgtttcgatggtcgacgcgccctctgcaccctctgcaccctct
gcacccttacggcagcctagggaatccgaggccctcgccgtccccgccatccagcaccct
agcccggagacggagcccatgaccaacgcccacagcagctccaggagccaatcgccacgc
ccgccatccgacgacacgaaaccgacggaggccgagacccctgcttcggcgtcgttgctg
aatgcaccaaagacggacagcaggtcgacctcgccccagccggtcgtcccgcgcacggag
atccccttccttttgcgcggcaagctgcgcgagtaccagcatcacggcctcgactggctc
gcctccttgtacgccaacaacacgaacgggatcctcgccgacgaaatgggccttggcaaa
accatccagaccatcgcgctgctggcgcacctcgcctgctaccacgaggtctggggtccg
caccttgtcatcgtgcccacgagcgtcatgctcaactgggaaatggagttcaagaagtgg
tgccccgggttcaagattctgacctactacggcaaccaggaggagcgcaaacggaagcgc
caggggtggaccaacgacgacgtttggaacgtgtgcatcacgtcctaccagatggtgctc
caggaccagcaggtgttccggcgtcgtcgctggcactacatgatcctcgacgaggcgcac
aacatcaaaaacttcaagtcgcagcggtggcagaccctgctggggttcaacacgcactcg
cggctcctcctcacgggcacgcctctgcagaacaacctcaccgagctgtggtctctgctg
tacttcctggcaccgcccgagaacggcgagggcggcttcgtcgacctccaagagttccac
aactggttctcccgccccgagtcgcagatcctcgagagcggccgcgagcagctcgacgac
gaggcccgcgccatcatcgccaagctgcacaaggtgctccggccctacctgctgcgtcgc
ctcaaggccgacgttgagaagcagatgccggccaagtacgagcacgtcgaattctgccgc
ctctcgaagcgccagcgcgagctctacgacgggttcctgtcgcgcgccgacacgcgccag
accctggcgtcgggcaactacatgtccatcatcaactgcctgatgcagcttcgcaaggtg
tgcaaccatccggacctgtttgtcgaccggcccatcatgagctccttccggatgcaacgg
tcggtggccgccgagtacgaggcggacgcgcggctggtgcagaagcgcctgtgggaaccc
accccgatgaagacggtcaacctctcctttctcaacatggtgccgacgctttacgagagc
atgtcggcggcccacgccgaccgcatcgcccagctgagcacgcaccgcgtcctgctcgac
ctccgcgacgcccagaggatgcgcgcccgcaacgcgtcgcacgagctggacccggcctcg
gtcaagtcgaacctcgtgttcctggagagcgcggcgcgctgggaccggttcgaggagctg
cagcactgcgtttacgtcaacgcgcttcggcgccagcagcggcccatttacggacgccgg
ctcgtcgagatgctgacgctcgacacccaccgccgcccgcacaagccgcggcccaaggtg
ccgcagaagatcatgagctggttcgaggaggactcgttcctgctgcgaaacgccatcccg
accctgcagcagcgcgccgactccatggagaccatcatcaccaagtttgcgtgcgtcacg
ccggccgtggtcacgggcgacatgacgcgactcctgctgggcgaccagggcgtcgcggcg
ttccgcgaggaggacctgaggctgtcggccccggtgcgccacgcgccctacatgccgccc
gagcggccgccggacccgtggcacgaggcgcgcatgcgcctgtcgatccagttccccgac
aagcgcctgctccagtacgactgcggcaagctgcaggtgctggacaagctgctgcggcgg
cttcaggcgggcggccaccgggcgctcatcttcacccagatgaccaaggtccttgacatc
ctcgagcagttcctcaacatccacggccacaagtacctgcgtctcgacggcgccaccaag
gtggagcagcgccagatgctcacggaccgcttcaaccacgaccctcgcatcctctgcttc
atcctctcgacccggtccggcggtctcggcatcaacctcaccggcgccgacacggtcatc
ttttacgaccaggactggaaccctgccatggacaagcaatgccaagaccggtgccatcgc
atcggccaaacgcgcgacgtgcacatttaccggctcgtcagcgagcacaccatcgaggcc
aacatcctgcgcaaggcgggccagaagcaaatgctcgacgacgttgtcatccaggagggc
gagttcacgacggactacttccacaagcttgccgtgcgcgacgttatcggcaccgacggc
gaggtgcgcgccaacgaggacgacgtggctgccaacgcggcgatggatcgcgtgctgggc
ggcgggcccgacgggaaggcggccccgcgcaacgtcggacgcgccctggagcaggccgag
gaccaggaggacgtcgcggcggcgcgggtggccgagaaggagacgcagcaggacgatgcc
gatttcttggagccccaggcgggcgccgcgtcggggacgtcgagcgcgcgcgccggtggc
accccgcgagagggcaccacggagcccggggcgacgacgggaggcgcggcgggcggggag
gcaaacgaaggaaaggccgacggcgtggtcgagtacaacgcgtttggagagcgcatggga
accattgatgactacatgttgcggttcatggccaaggcgctcgaagggacggcgctggag
ctgcccaaggataagaagaagagcaagaaaaaagggaaggacacaaggaagcgctaa
DBGET
integrated database retrieval system