Remersonia thermophila: 98124153
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Entry
98124153 CDS
T10833
Symbol
VTJ83DRAFT_3161
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
rthe Remersonia thermophila
Pathway
rthe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
98124153 (VTJ83DRAFT_3161)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98124153 (VTJ83DRAFT_3161)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
98124153 (VTJ83DRAFT_3161)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
RHG29_45_N
AAA_27
DUF7669
Motif
Other DBs
NCBI-GeneID:
98124153
NCBI-ProteinID:
XP_070867039
JGI:
Remth1_3161
LinkDB
All DBs
Position
3:complement(join(1230089..1232899,1232994..1233017))
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AA seq
944 aa
AA seq
DB search
MSSRPELKVDDEHGFIRFFKSLPAVGDDVIRIFDRGDWYTAHGENANFIARTVYKTTSVV
RQLGRNDSSGLPSVTMTVTVFRQFLREALSKLGKRVEIWASPNGRMNWKIAKQASPGNLQ
DVEDDIGNLAEGAPVILAVKISAKASEARAVGVCFGDASVRELGVSEFLDNDLYSNFEAL
LIQLGVKECLIQVEKAEKQDKDPELAKLRQIIDSCGVAITERPLGDFGTKDIEQDLARLL
KDERSVTLLPQTDLKLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAHFMKLDAAAVKA
LNLMPGARDGSKTMSLFGLLNHCKTPLGSRLLAQWLKQPLMDKEEIEKRQQLVEAFANDT
ELRQTMQEEHLRAIPDLYRLAKRFQRNKANLEDVVRVYQVVIRLPGFLGTLEGVMDETYR
DPLDEAYTNKLRELSDSLAKLQEMVETTVDLDALDNHEFIIKPEFDDSLRIIRKKLDKLR
SDMDKEFASAASDLGQERDKKIFLENHKVHGWCMRLTRTEAGCIRNKSRYLECSTQKNGV
YFTTKTLQAYRREFDQLSQTYNRTQSGLVSEVVGVAASYCPVLERLAGVLAHLDVIVSFA
HCSVHAPTAYVRPKIHPRGEGQTILKEARHPCLEMQDDVQFITNDVELTRDKSSFLIITG
PNMGGKSTYIRQIGVIALMAQVGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEM
LETANILKSATAESLIIVDELGRGTSTYDGFGLAWAISEHIVREIGCFALFATHFHELTA
LADQYPQVRNLHVTAHISGASAGGGGGPNKPKADEKREVTLLYRVEPGVCDQSFGIHVAE
LVRFPDKVVRMAKRKADELEDFSSSRQEGSGDGNDSGNGGPAAEYSKRDVEEGSALLKDV
LVRWKDEVRAGSMSKEDMVARLREMVAADEKLLANPFFQSIKAL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgacccgagctcaaggtcgacgacgaacatggattcatccgctttttcaag
tccctgcccgccgtgggcgatgatgtgatccgcatcttcgaccgaggcgactggtacacg
gcacacggcgagaatgccaacttcatcgctcgcaccgtctacaagacgacgtcggtcgtg
cgccagctcggccgcaatgacagctccggcctcccatccgtcacaatgaccgtgaccgtc
ttccggcagtttctccgcgaggcgctcagcaagctgggcaagcgggtcgagatctgggcg
agccccaacgggcgcatgaactggaagatcgccaagcaggcatcaccaggcaatcttcaa
gacgtggaggacgatatcggcaacctggccgagggcgcccctgtcatcctggccgtcaag
atctcggccaaggcatccgaggcgagagccgtcggcgtgtgcttcggcgatgccagcgtc
agggagctgggcgtcagcgagttcctcgacaatgacctctactccaactttgaggccctg
ctgatccagctgggcgtgaaggagtgtctgatccaggtggagaaggcggagaagcaagac
aaggacccggagctcgccaagctgaggcaaatcatcgacagctgcggcgtggccatcacg
gagcggcccctcggcgactttgggaccaaggacatcgagcaggatctggcgcggctgctg
aaagacgagaggtcggtgaccttgctaccgcagaccgacctcaagcttgctatgggctcg
gccgccgccctcatcaagtacctcggtgtcctccacgacccctccaacttcggccagtac
cagctctaccaacacgacctcgcccacttcatgaagctggacgcggccgccgtcaaggct
ctcaacctcatgccgggggcgagggacggctccaagaccatgagcttgttcggattgctg
aaccactgcaagaccccgctcggcagccggctgctcgcgcagtggctcaagcagccgctg
atggacaaagaggagattgagaagcgccagcagctggtcgaggccttcgccaacgatacc
gagcttcgtcagacgatgcaggaggagcacctcagggccattccggacctctaccgcctg
gccaagcgcttccagcgcaacaaggcgaacctcgaggatgtcgtgagggtataccaggtt
gtcatccgcctcccgggcttcctcggcacgctcgagggcgtcatggatgagacgtaccgc
gatcccctggacgaggcctacaccaacaagcttcgggagctgtccgacagcctcgccaag
ctgcaggagatggttgagacaaccgtggacctggacgccctcgacaaccacgagttcatc
atcaagcccgagttcgacgacagcctgcgcatcatccgcaagaagctcgacaagctgcgc
agcgacatggacaaggagtttgccagcgcggcgagcgacctgggccaagagcgagacaag
aagatctttctcgagaaccacaaggtccacggatggtgcatgcgcctgacccggaccgaa
gccggctgcatccggaacaaatctcgctacctcgagtgttcgacgcagaagaacggcgtc
tacttcacgaccaagacgctgcaagcctaccgccgcgagtttgatcagctctcgcagacc
tacaacaggacgcagagcggcctcgtgagcgaagtcgtcggcgtggcggcatcgtactgc
ccggtccttgagaggctggccggcgtcctcgcgcacctggacgtgatcgtgtccttcgcg
cactgctccgtccacgcgcccacggcctacgtccggcccaagatccaccctcgcggggag
ggccagacgatcctgaaggaagccaggcacccgtgcctcgagatgcaggatgacgtccag
ttcatcaccaacgacgttgagctcacgcgcgacaagtcgtccttcctcatcatcacgggc
cccaacatgggcggcaagtcgacctacatccgccagatcggcgtcatcgcgctcatggcg
caggtcggctgcttcgtgccgtgcagcgaggccgagctgaccatcttcgacagcatcctg
gcgcgcgtcggcgccagcgacagccagctcaagggcgtatcgaccttcatggccgagatg
ctcgagacggccaacattctcaagtctgccacggccgaaagcctcatcatcgtcgacgag
ctcggccgcggcacctccacctacgacggcttcggcctcgcctgggccatctcggagcac
atcgtccgcgagatcggctgcttcgccctcttcgccacccacttccacgagctgaccgcc
ctggccgaccagtacccgcaggtgcgcaacctgcacgtcacggcccacatcagcggcgcc
agcgccggcggcggcggcggccccaacaagcccaaggcggacgagaagcgcgaggtcacg
ctgctctaccgcgtcgagccgggcgtgtgcgaccagagcttcggcatccacgtcgccgag
ctggtgcgcttcccggacaaggtggtgcgcatggccaagcgcaaggccgacgagctcgag
gacttttcgtcgagcaggcaggagggcagcggcgacggcaatgacagcggcaacgggggg
cccgcggctgagtacagcaagcgcgacgtcgaggagggcagcgccctgctcaaggacgtg
ctcgtccgctggaaggacgaggtccgcgccgggtccatgtccaaggaagacatggtggcg
cgcctgagagagatggtggctgccgatgaaaaactgctggcaaaccccttcttccagagc
atcaaggccttgtaa
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integrated database retrieval system
