Remersonia thermophila: 98124206
Help
Entry
98124206 CDS
T10833
Symbol
VTJ83DRAFT_3209
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
rthe Remersonia thermophila
Pathway
rthe03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
98124206 (VTJ83DRAFT_3209)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
98124206
NCBI-ProteinID:
XP_070867087
JGI:
Remth1_3209
LinkDB
All DBs
Position
3:join(1381507..1381743,1381804..1385001)
Genome browser
AA seq
1144 aa
AA seq
DB search
MDSNPAKRRKLDHAQDDAEVALAAAASAGISRSTTFVLEAEELLEYVCPDYDAAFSGADG
LLHRIKGLVEGIEAHDQLQIAEAAAKLEKKHKIKVPFPEPRPDGSSNYKVAFAAPSKFNV
VGSYVFKTMVKTQKNPAVDMVVVIPESVLQEKDYLDMRYFYKRAYYLAVIAAALKKELGA
QGQLSYEYLHGNPLCPVLVFQPKGPAAGTTEPEPPRSQDFRIRILPSAPEGFFPAAKLHL
GASLIRKARDGEAPSEPTPFYNSTVAAESTFFPYLKVLRQAEKKSKGFRKACVLGRIWLQ
QRGFGSDVAQGGFGQFEWALVLALLLQGGDKKGQAALSASLSSTQLFKAMIQFLSVTNFS
EKAYVFGSAKADLDAHVESGPVLYDAARQLNIAFKMGSWSAALLHQHARWTRSLLAENAG
DQFTPTFILKADVPAHSFDFIAHLDPKKAADQAGLDPRGPAWRLGSRVYRILKRALADND
MGERARVIHVKASACAPWALADGPARETAPLEIGVVFDPLRMARTVDRGPVAGPSAEQQQ
ECARFRKFWGEKAELRRFEGDDARETLVWSSTTPFALCEEIVRYILGRHLKVDKELAVYG
GRLPALLSLKPADTAVFNVAKKAFDVFERDVRGLDDLPLRVRQIAPVCAELRHASVSLPE
LDPSKSWRRPLECVISFEASGKWPESLIAIQRTKIAFLIMIGSLLEKSKPGDVRTHVGLE
DSAYDDENLAFLDVLYENGPAFRLRVHSDLEESLLQRQSKNKMSEPWKRQRAATLLASFR
RLYVHLPLHNQYMTTCATRFPALSPTLRLVKHWFNAHKLACHFTPEFMELAVLRVFLAPH
PWEAPTSPATGFTRVLAFLAHWDWRSDALILDTSGEMTAADRSAIATRLDAWRKIDPHMN
HTVLFVATAQEPSGTAWTTLDGQPKPPKVAAARMTSLAKTASRLIKDKGVGLDVRTLFVP
SLKEYDVLLHLNKKVLKAALATYPGEPAEAYAASDADAPQHAKFKNLSAHAGEPPLPLAQ
HPADALLKRLDAVYSHGGPLLFFRGGSPDDATIGAVWNPRMPARTFRVSLPTAYKPASAA
AVEAGRKRRAEKKEEESGDEGENRGGEEEEKEEDMVEVDREAILAEIARIGGDVIERIEV
KDSS
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggattctaacccggccaagcggagaaagcttgaccacgcccaagacgacgccgaagtc
gcgctggcggctgcggcctcggctggcatttcccggtccaccaccttcgtccttgaagcc
gaagagctgctcgaatacgtctgtcccgactacgatgctgcgttttccggtgccgacggc
ctcttgcaccgcatcaagggtctcgtcgaaggcatcgaagctcacgatcagctccagatc
gccgaggccgccgccaaactcgaaaagaagcacaagatcaaggttccgttccccgaaccg
cggcccgatgggtcgtccaattacaaggtcgcctttgcggcgccctccaagttcaatgtc
gtgggcagctacgtcttcaagaccatggtcaagacgcaaaagaaccccgccgtcgacatg
gtcgttgtgatccccgagtcggtgctgcaggaaaaggactacctcgacatgcgctacttc
tacaagcgggcctactacctggccgtcatcgctgccgccctgaagaaggagctcggcgcc
caaggccagctctcctacgagtacctccacggaaacccgctctgccccgtcctcgtcttc
cagccgaagggccccgccgccggcaccaccgagcccgagcccccgaggtcgcaagacttc
aggatacgcatccttcccagcgcgcccgaggggttttttccggcggcgaagctccacctg
ggcgcttctctgatccgcaaggcgcgcgacggcgaagccccgtccgagcccacccccttc
tacaactcgaccgtcgccgccgagagcaccttcttcccgtatctcaaggtcctccgccag
gccgagaagaagtccaagggcttccggaaggcctgcgtcctgggccgcatctggctgcag
cagaggggcttcgggagcgacgtggcccagggcggcttcggccagtttgaatgggccctc
gtgctggccctcctgctccagggcggcgacaagaaaggccaggccgcgctgtcggcgtcc
ctcagcagcacccagctcttcaaggccatgatccagttcctctccgtgaccaacttctcc
gagaaggcctacgtgtttggctcggccaaggcggatctcgacgcgcacgtcgaatcaggg
cccgttctctacgacgccgcacgccagctgaacatcgccttcaagatggggtcttggtcg
gccgccttgctgcaccagcacgccaggtggacccgcagcctcctggccgagaacgcgggc
gatcagttcaccccgaccttcatcctcaaggccgacgtccctgctcacagcttcgacttc
atcgcccatttggatcccaagaaggcggcggaccaggcggggctcgaccctcggggtccc
gcgtggcgcctggggagccgcgtgtatcggatcctcaagcgggcgctggccgacaacgac
atgggcgagagggctcgcgtgatccacgtcaaggcgtcggcctgcgcgccgtgggccctc
gccgacggccctgccagggagaccgcccccctcgagatcggcgtggtgtttgaccccctg
aggatggcccgcaccgtcgaccgcggcccggtggccggccccagcgccgagcagcagcag
gaatgcgcccggttccggaagttttggggcgaaaaggcggagctccggcgcttcgaaggc
gacgacgcccgcgagaccctcgtctggtcttcgacgacgcccttcgccctctgcgaggag
atcgtgcgctacatcctggggcggcacctcaaggtggacaaggagctggccgtctacggc
ggccgccttcccgcgctgctgtccctcaagcccgccgacacggccgtcttcaacgtggcc
aagaaggcgtttgacgtgttcgagcgcgacgtccgcggcctcgacgaccttccgctccgg
gtgcgccagatcgcgcccgtctgcgcggagctccgccacgcctcggtctcgctgcccgag
ctggacccgtccaagtcgtggcggcgccccctcgagtgcgtcatctcgttcgaggcgtct
ggcaagtggcccgagagcctcatcgccatccagcggaccaagatcgccttcctcatcatg
atcggcagcctgctggagaagagcaagccgggcgacgtccggacgcacgtcggcctcgag
gattcggcctacgacgacgagaacctcgccttcctcgacgtcctgtacgagaacggcccg
gcgttccggctgcgcgtgcacagcgacctcgaggagtccctgctgcagcgccagtccaag
aacaagatgagcgagccgtggaagcggcagcgcgccgcgaccctgctcgccagcttccgg
cgcctgtacgtccacctgccgctgcacaaccagtacatgaccacgtgcgccacgcgcttc
cccgccctgtcgccgaccctccgcctcgtcaagcactggttcaacgcgcacaagctcgcg
tgccacttcaccccagagttcatggagctcgccgtcctgcgcgtcttcctggccccccac
ccctgggaggcgccgacgagccccgcgacgggcttcacgcgcgtcctcgccttcctcgcg
cactgggactggcgctccgacgcgctcatcctcgacacgagcggcgagatgacggcggcc
gaccgctcggccatcgcgacgcgcctcgacgcctggcgcaagatcgacccgcacatgaac
cacacggtgctgttcgtcgccacggcccaggagcccagcggcaccgcctggaccaccctc
gacggccagcccaagccccccaaggtggccgccgcgcgcatgacgtcgctcgccaagacg
gcctcgcggctcatcaaggacaagggcgtcgggctcgacgtccggacgctctttgtcccg
tccctcaaggagtacgacgtgctcctccacctcaacaagaaggtgctcaaggcggccctt
gcgacctaccccggcgagcccgccgaggcctacgccgcctcggacgccgacgccccgcag
cacgcaaagttcaagaacctgagcgcccacgccggcgagcccccgctcccgctggcccag
caccccgccgacgccctcctgaagcgcctcgacgccgtctactcccacggcgggccgctg
ctcttcttccgcggcggcagcccggacgacgccaccatcggcgccgtgtggaacccgcgc
atgccggctcggacgttccgcgtcagcctgccgacggcgtacaagccggcgagcgcggcg
gcggtcgaggcggggaggaagcggagggcggagaaaaaggaggaggagagcggggacgag
ggagagaacaggggaggcgaagaggaggagaaggaggaggacatggtcgaggtggatcgg
gaggccatcttggccgagattgcgaggatcggcggcgacgtgatcgagaggatcgaggtg
aaggattcgtcgtaa
DBGET
integrated database retrieval system