Remersonia thermophila: 98124210
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Entry
98124210 CDS
T10833
Symbol
VTJ83DRAFT_3212
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98124210 (VTJ83DRAFT_3212)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98124210 (VTJ83DRAFT_3212)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
98124210 (VTJ83DRAFT_3212)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
98124210 (VTJ83DRAFT_3212)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
98124210 (VTJ83DRAFT_3212)
microRNA pathway
RISC loading complex
98124210 (VTJ83DRAFT_3212)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL2
PAZ
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
98124210
NCBI-ProteinID:
XP_070867090
JGI:
Remth1_3212
LinkDB
All DBs
Position
3:join(1395521..1395601,1395650..1395781,1395833..1396424,1396481..1396905,1396985..1398553)
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AA seq
932 aa
AA seq
DB search
MSAAKRNPLELPKGLNQRCDLPPEAYWHADRTDYTPFAVRPGYSKSGTDIRVLVNQFRVE
SVTGRDVYQYDVTITPEPSGAIVYKKVWNTPLVKAKLAEFKAPWLYDNRKLAWSTAKVSN
VKIEVDLGADEGRPGRKNNVFVLQIQQTCKVRMESLKAYLEKRAPWDNSVLECMSFLDHA
LRQGPSERMELIKRTFINENSATKILNPCTEAIKGIYSAIRLSDSLKSGGLGLGVNVDVT
NQTFWIGQGLEHLVRNYLGWQNPRQWGNLNTTQMAGFLKPVNVRQKDGTVRLGPSEAFKL
LKKLQGIRFVVKHRGSAGQPRKEYKIRRFHFDPSFGTEGAHAKNVTFEKKMEDGSTKKYT
IADYYLRTYKTRVMHPLLPLVETINAGLFPMELCEVVRFNRYAYKLDPEQTSAMITFSQA
RPDALKPEIEHMVRNLDWANDRYLAHFGVKISTKMPVVQAKLLPNPVVKYANTTKNPGTR
GRWDLMGAKFVQSPFDVKKWAVVIVDQRTDRATAQNFGREFKTAYMRHGGKISSDPVVLE
LRGNDIENDMAGVVGTMTQKLGGFPHLVFFILAQKKQFPYDRLKRQADCRFGFISQMVLG
QHAKKCQGQYLSNVCLKVNAKLGGRNSALESKTPLFAKPTMMIGVDVSHGQTAEGSVSTA
AMCASMDRDCAVYSAAVQTNGWRVEILQEENMWNLLGQLVTRWRNRNKMLPEHVFYMRDG
VSEGQFAHVMDIEVRMMRTLFKEHFKTSPKITVIVATKRHHIRLFPERGDKNNNCLPGTL
VEREVTHPFHYDFYLCSHAALQGTARPVHYNVIHDEVGLPHDTLQRILYEQCYQYCRSTT
PVSLHPAVYYAHLAADRARWHEPSPDAAPVQPNGKFQVLHRAQGPMAKAEVKTATSRPKD
AQPPPLLAIGQGNPRPECKPAIDFFKGTMWWV
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccaagcgcaacccgcttgagctgcccaagggcctcaaccaacgttgcgat
ctgccccccgaggcctactggcacgccgatcgcaccgactacactccgttcgccgtccgt
cccggctactccaagtcgggcaccgacattcgcgttcttgtcaatcagttccgcgtcgag
tcggtgaccggtcgcgatgtctaccagtatgacgtcaccatcacccccgagccctcgggg
gccatcgtgtacaagaaggtctggaacaccccgctggtcaaggccaagctggccgaattc
aaggccccttggctctacgacaaccgcaagctcgcctggtccacggccaaggtttccaac
gtcaagatcgaggtcgacctcggcgccgacgagggccgccccggccgcaagaacaatgtc
ttcgttctccagatccagcagacctgcaaggtccgcatggagtccctcaaggcctacctg
gagaagcgcgctccctgggacaactcggtcctcgagtgcatgagcttcctggaccatgcc
ctccgccagggcccctcggagcgcatggagctcatcaagcgcaccttcatcaacgagaac
tccgccaccaagatcctgaacccgtgcaccgaggccatcaagggcatctactcggccatc
cgcctgagcgattccctcaagtcgggcggcctcggcctgggcgtcaacgtcgacgtcacc
aaccagaccttttggatcggccagggccttgagcatctcgttcgcaactacctgggctgg
cagaaccctcgccaatggggcaatctcaacacgacacagatggcggggttcctgaagccc
gtcaacgtgcggcagaaggacggcacggtgcgcctggggccgtccgaggccttcaagctg
ctcaagaagctccagggcatccgcttcgtcgtcaagcaccgcggcagcgccggacagccc
cgcaaggagtacaagatccggcgcttccacttcgaccccagcttcggcaccgaaggcgcc
cacgccaagaatgtcacgtttgaaaagaagatggaggacgggtcgaccaagaagtacacc
atcgccgactactacctccggacgtacaagacgcgcgtcatgcatccgctgctgcctctt
gtcgagacgataaatgccggcttgttccccatggagctgtgcgaggtggtccggttcaac
cggtacgcctacaagctcgacccggagcagacatcggccatgatcaccttctcccaggcc
cggcccgacgccctcaagcccgagatcgagcacatggtgcgcaacctcgactgggccaac
gaccgctatctggcgcactttggcgtcaagatcagcaccaaaatgcccgtggtccaggcc
aagctcctgccgaaccccgtcgtcaagtacgccaacacgaccaagaacccgggaacgagg
ggccgctgggatctgatgggcgccaagtttgtgcagtccccctttgacgtcaagaagtgg
gcggtggtcatcgtggaccagcgcaccgaccgggccacggcgcagaactttgggcgggag
tttaaaacggcgtacatgcgccacggcggcaagatcagcagcgaccccgtggttctggag
ctcaggggcaacgacatcgaaaacgacatggcgggcgtcgtcggcacgatgacgcagaag
ctgggcggcttcccgcacctcgtcttcttcatcctggcgcagaagaagcagttcccgtac
gaccggctcaagcgccaggccgactgccgctttggcttcatctcgcagatggtgctgggc
cagcacgccaagaagtgccaggggcagtacctctccaacgtctgcctcaaggtcaacgcc
aagctgggcggccggaactcggcgctggagagcaagacgcccttgtttgcgaagccgacc
atgatgatcggcgtcgacgtgtcgcacggccagacggccgagggctcggtgtcgacggcg
gccatgtgcgcgtccatggaccgcgactgcgccgtctacagcgccgcggtgcaaaccaac
ggctggcgcgtcgagatcctccaggaggagaacatgtggaacctgctcggccagctcgtc
acgcgctggaggaaccggaacaagatgctccccgagcacgtgttttacatgcgcgacggc
gtctcggagggccagttcgcccacgtcatggacattgaggtgcgcatgatgaggacgctc
ttcaaggagcacttcaagacgtcgcccaagatcacggtgatcgtggcgaccaagcgccac
cacatccgcctcttccccgagcgcggcgacaagaacaacaactgcctgcccggcacgctg
gtggagcgcgaggtgacgcatcccttccactacgacttttacctgtgctcgcacgcggcg
ctgcagggcacggcccgccccgtccactacaacgtgatccacgacgaggtcggcctgccg
cacgacacgctgcagcgcattctctacgagcaatgctaccagtactgccgctcgacgacg
cccgtgtcgctgcaccccgccgtctactacgcccacctggcggcggaccgggcccgctgg
cacgagcccagcccggacgccgcgccggtgcagcccaacgggaagttccaggtgctccat
cgcgcccaaggccccatggccaaggccgaggtcaagacggcgacgtcgcgtcccaaggac
gcccagccgccccccctgctggccatcggccaaggcaacccgcggcccgagtgcaagccc
gccattgactttttcaagggcaccatgtggtgggtgtaa
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