KEGG   Remersonia thermophila: 98124303
Entry
98124303          CDS       T10833                                 
Symbol
VTJ83DRAFT_3297
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
rthe  Remersonia thermophila
Pathway
rthe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    98124303 (VTJ83DRAFT_3297)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98124303 (VTJ83DRAFT_3297)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     98124303 (VTJ83DRAFT_3297)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_23 AAA_27 AAA_29
Other DBs
NCBI-GeneID: 98124303
NCBI-ProteinID: XP_070867175
JGI: Remth1_3297
LinkDB
Position
3:complement(join(1709097..1712414,1712491..1712541,1712597..1712941))
AA seq 1237 aa
MTAAAARTPAKPAKTPTSSTTKKAPSTGKQASILGFFSKVPAPGPANGASPSPSTKLSAS
ASSKKDESSRCLKETTRANSMLPPRRSAATPVPSSDAIEPEPSSSQENRDASTAKKKSGA
ETTTLPSSPTRKARKAVNYAESSDDDDDDVFTAMSRRSKQPRRARAAVPDDDDDDDAFEV
EPDEPEDDDDDDLADFVVSDDSDAPSKSKKRKRAASKPVPRKKTNLSSSPGPETRSPIAD
DDDEVMQDIPPSTSTAQKWKYDPDDVRPREAAPQAAPAPQKSSGPKPKPKPHTKEPEERY
PWLANILDANKNPPGHPDYDPTTLYIPPLAERNFSPFEKQYWDIKKNLWDTVVFFKKGKF
YELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALG
KEMREREAAGKKADKIIRRELACILTAGTLVDGSMLQDDMATYCAAIKETTTMDNRPSFG
VAFVDAATGQFFLSEWEDDVDLTRFETFVAQVSPRELLLEKSRLSTKALRILKNNTGPTT
IWNHLKPGTEFWDADLARRELDCGGYFAADGKEDEARWPQSLDEARDKDLAMSALGGLTH
YLRVLKLDQSLLSQGRFTWYNPIHRNGTLILDGQSLINLEVFANTVNGGPEGTLFSLLNR
CITPFGKRLFRQWVCHPLCNIQKINERLDAVDMLNADRDIMHRFSSQMVKMPDLERLISR
IHAGACRPDDFVRVLEGFEQIDYTMNLLRTFGNGSSSSSSGLVDRLIASMPDLKEPLGYW
ETAFDRAKARDEKVLIPKRGIEEDFDSSVDEISRIKGELHALLERQKASLGCKTLKFTDV
GKEIYQVEAPKSVKVPAKWRQMSATSAVKRYYFRELEDLVRELQEAEETHSQVVKEVAGR
FFRRFDADYEVWLQAIRVIAQLDCLISLAKSSAALGVPSCRPEFVDDERSVVEFRELRHP
CMINTVDDFIPNDIKLGGDEAKINLLTGANAAGKSTILRMTCIAVIMAQIGCHVPAASAR
LTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVA
VAQAVLHHVATHVGCVGFFATHYHSLAAEFAGHPEVRARRMRIRVDDEERRVTFLYRLED
GVAEGSFGMHCASMCGIPRRVVERAEVAAREWEHTSRLKESLEKARQGCYIPLGILSDVA
SLLNGRRRREEEEEEEEEDAMVGERGVEVLLKAIEAL
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgacggctgctgcggcccgcactcccgcgaagccggcaaagacgccgacgtcgtcgacc
acgaagaaggctccctcgacgggcaagcaggctagcatcctgggcttcttctccaaggta
ccggcgcccggacccgccaacggagcctctccttcgccgtcgaccaagctctccgcctcg
gccagcagcaaaaaggacgagtcctcaagatgcctcaaagagaccacccgcgccaactcg
atgctgcccccccggcgctccgctgccaccccggtgcccagcagcgatgcgatagagccc
gagccctcgagctcccaggaaaacagggacgcgagcaccgccaagaagaagtcgggtgcc
gaaacgacaacccttccaagcagccctacccgaaaggccaggaaggctgtcaattatgcc
gagtcgtcggacgacgacgacgatgacgtttttaccgccatgagccgtcgttccaagcag
ccgcgccgcgctcgcgcggctgttccggatgatgacgatgatgacgacgccttcgaggtg
gagcccgatgagcccgaggatgacgacgacgacgaccttgccgactttgttgtatcggac
gactcggacgctccgtcgaaatccaagaagcggaagcgggcggcttccaagcccgtgccc
cggaaaaagaccaatctctcatcttccccgggccccgagacgcgctcacccatcgccgac
gacgatgacgaggtcatgcaggacatccctccttcgacgtcaacggcgcaaaagtggaag
tacgaccctgacgatgttcggccgagggaggccgcgccacaggcggcccctgccccgcag
aagtcatcaggccccaagcccaagcccaagccgcacaccaaggagcccgaggagaggtac
ccctggcttgccaacatcttggacgccaacaagaaccctcccggccaccccgactacgac
ccaaccaccctctacatcccgcccttggccgaacgcaacttctcgccttttgagaagcag
tactgggacatcaagaagaacctctgggacacggtcgtcttcttcaagaagggcaagttc
tacgagctctacgagaacgacgccaccatcggccaccagctgttcgatctcaagctcacg
gaccgcgtcaacatgcgcatggtcggcgtcccggagagctcgctcgacatgtgggtcaac
cagttcgtcgccaagggctacaaggtggcgcgggtcgaccagatggagtcggccttgggc
aaggagatgcgggagcgcgaggccgccggcaagaaggccgacaagatcattcgccgcgag
ctggcctgcatcctgacggccggcacgctcgtcgacggcagcatgctgcaggacgacatg
gccacgtactgcgccgccatcaaggagacgacgacgatggacaaccgcccgtcctttggc
gtcgcctttgtggacgccgccaccggccagttcttcctgtccgagtgggaggacgacgtc
gacctcacaaggttcgagaccttcgtcgcccaggtgtcgccccgcgagctgctcctggaa
aagtcgcgcctgtcgaccaaggcgctgcgcatcctcaagaacaacacgggccccaccacc
atctggaaccatctgaagccgggcaccgagttctgggacgccgacctcgccaggcgcgag
ctcgactgcggcggctactttgcggcggacggcaaggaggacgaggcgcgctggccccag
agcctcgacgaggcaagggacaaggacctcgccatgtcggccctgggcggcctgacgcac
tacctgcgcgtgctcaagctcgaccagagcctcctctcgcagggccgcttcacgtggtac
aaccccatccaccgcaacggcacgctcatcctcgacggccagagcctcatcaaccttgag
gtctttgccaacaccgtcaacggcgggcccgagggcaccctgttcagcctgctcaaccgc
tgcatcaccccgttcggcaagcgcctgttccgccagtgggtctgccacccgctgtgcaac
atccaaaagatcaacgagcgcctcgacgccgtcgacatgctcaacgccgaccgcgacatc
atgcacaggttttcatcgcagatggtcaagatgcccgacctggagcgcctcatctcgcgc
atccacgccggcgcctgccggcccgacgacttcgtgcgggtcctcgaaggctttgagcag
atcgactacaccatgaacctcctgcggacgtttggcaacggcagcagcagcagcagcagc
gggctggtcgaccggctgatcgcgtccatgccggacctgaaggagcccctgggctactgg
gagacggcctttgaccgggccaaggcgcgcgacgaaaaggtgctcatcccgaaacggggc
atcgaggaggactttgactcgagcgtcgacgagatttcgcgcatcaagggcgagctccac
gccctcctcgagaggcaaaaggccagccttggctgcaagacgctcaagttcaccgacgtg
ggcaaggagatttaccaggtcgaggcgcccaagtcggtcaaggtccctgccaagtggcgc
cagatgtcggccacgtccgccgtcaagcgctactactttcgcgagctcgaggacctcgtg
cgcgagctgcaggaggccgaggagacgcactcgcaggtcgtcaaggaggtggccggccgc
ttcttccggcggttcgatgccgactacgaggtctggctgcaggccatccgcgtcatcgcc
cagctcgactgcctgatcagcctggccaagtcgtcggccgcgctgggcgtgccgagctgc
cgcccggagtttgtcgacgacgagcgcagcgtggtcgagttccgggagctgcgccacccg
tgcatgatcaacacggtcgacgacttcatccccaacgacatcaagctcggcggggacgag
gccaagatcaacctcctcaccggcgccaacgcggccggcaagtcgaccatcctgcgcatg
acgtgcatcgccgtcatcatggcgcagattggttgccacgtccccgccgcctcggcccgc
ctgaccccggtcgatcgcatcatgtcccgcctcggggccaacgacaacatctttgccgcg
cagagcacctttttcgtggagctctccgagaccaaaaagatcctgtccgaggcgacgcca
cgctcgctcgtgatcctcgacgagctgggccgcggcacctcgtcgtacgacggcgtcgcc
gtcgcccaggcggtcctgcaccacgtggccacccacgtcgggtgcgtcggcttcttcgcc
acgcactaccactccctggctgccgagtttgcgggccaccccgaggtgcgggcgcgccgc
atgcgcatccgggtcgacgacgaggagcggcgcgtcacgttcctgtaccgcctcgaggac
ggcgtcgcggagggcagcttcgggatgcactgcgccagcatgtgcgggatcccacgccgg
gtggtcgagcgcgccgaggtggcggctcgggagtgggagcatacgagccggctcaaggag
agcttggagaaggcccggcaggggtgctacatcccgctgggcatcctgagcgatgtggcg
agcctgctgaacgggaggcggcggcgggaggaggaggaggaggaggaggaggaggacgcg
atggtgggcgagaggggcgtcgaggtgctgctgaaggcgattgaggcgttgtga

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