Remersonia thermophila: 98124365
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Entry
98124365 CDS
T10833
Symbol
VTJ83DRAFT_3352
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
rthe Remersonia thermophila
Pathway
rthe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98124365 (VTJ83DRAFT_3352)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rthe03041
]
98124365 (VTJ83DRAFT_3352)
Spliceosome [BR:
rthe03041
]
Complex A
Other components
Complex A specific factors
98124365 (VTJ83DRAFT_3352)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_3
zf-CCHC_4
zf-CCHC_6
zf-CCHC_2
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
98124365
NCBI-ProteinID:
XP_070867230
JGI:
Remth1_3352
LinkDB
All DBs
Position
3:complement(join(1901568..1902245,1902312..1902626,1902702..1902925,1903122..1903339,1903413..1903623,1903696..1903873))
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AA seq
607 aa
AA seq
DB search
MAWRNQGITGSNNIPLGKRRFGSDTDDAPKNTTDSTTTTTNNGIPNGSNGDIKRGRSPER
SEVDGTKRRRKRHRWGDATENKAAGLMGLPTAILADMTSEQLEAYTLHLRIEEITQKLKI
NDVVPADKDRSPSPPPQYDNHGRRINTREYRYRKRLEDERHKLVEKAIKTIPNYHPPADY
RRPTKTTEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEGKGRS
DAAHSSNQEEDLHCLIMADSEDKVNKAKALIHNVIETAASIPEGQNELKRNQLRELAALN
GTLRDDENQACQNCGQIGHRKYDCPERQNYTANIICRVCGNAGHMARDCPDRQRGSSWRN
DGPRAPGRIGGGTGDAVDREYEQLMRELGGTGAPPARIEAGPGSGGGGGGGGGGGGSGDA
ARPWQRGPTGAPAPWRVRNHHDREDGAPPSGPSGGPAPWARDRDRDRDRDRDSRPPWQRG
PDGSRDGADSYHPPGQAPYGAAPPAPGAGAPWHQPVAPPAYGAYPGYGAYGAPPGLGAAP
PGLPPPPPPPPGAPPGAGVPSGLAGGLNALIQQYANPSAPPPPPPPAGDAPPPPPPPMDL
PPPPPGA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggagaaaccagggaatcaccggatcgaacaacatcccgttgggaaaacgccgc
ttcggcagcgacaccgacgatgccccgaaaaacacgaccgattcgaccaccaccaccacc
aacaacggcatcccgaacggctccaacggcgacatcaagcgcggccggagcccggagcgc
tccgaggtcgatggaacgaagcgtcgcaggaagcgtcatcgctggggcgacgcgacggag
aacaaggcggcgggtctgatgggcttgcccaccgccattcttgccgacatgaccagcgag
cagcttgaggcctacacgctccacctgcgcatcgaggagattacccagaagctcaagatc
aacgatgtggtgccggcggacaaggacaggtccccctcgcctcctccgcagtacgacaac
cacggtcgccgtatcaacacgcgcgagtaccgctaccgcaagcggctcgaggatgaacgc
cacaagctggttgagaaggccatcaagaccatccccaactatcaccctcctgcggattac
cgccggcccaccaagaccaccgagaaggtctacgtgccggtcaacgactacccagagatt
aacttcattggcttactcatcggacctcgtggcaacaccctcaagaagatggaggcagaa
tcgggcgccaagattgccattcgcggcaagggctccgtcaaggagggcaaaggccgctct
gacgctgcccactctagcaaccaggaagaggatcttcactgcctgatcatggccgactcg
gaggacaaggtgaacaaggccaaggcgctgatccacaacgtcattgagacggccgcgtcc
atccctgagggccagaacgagctgaagcggaaccagctgcgcgagctggccgccctcaac
ggaaccctgcgtgacgacgagaaccaggcatgccagaactgcggccagatcggccaccgc
aagtacgactgtcccgagaggcagaactacacggccaatatcatttgccgtgtctgcggc
aacgccggccacatggccagggactgcccggaccgtcagcgaggctccagctggcgcaac
gatgggcctcgggcccccgggcgtatcggcggcggcaccggcgacgccgtggaccgcgag
tacgagcaactcatgcgcgagctcggcggcacaggcgctccgccagcccgcatcgaagca
gggcccggttccgggggtggtggtggcggcggcggcggcggcggcggcagcggagatgct
gcccggccctggcagcgtggcccgacgggagctcctgcgccttggcgcgttcggaaccac
cacgaccgcgaggatggtgctcctccgtccggcccgtccggcggccccgctccatgggcc
cgcgaccgcgaccgcgaccgcgaccgcgatcgcgactctcggcccccctggcaacgtgga
cccgacggcagccgcgacggtgccgacagttaccacccgcctggtcaggccccgtatggc
gcggctcctccggccccgggtgccggtgctccttggcaccaacctgtggctccacccgca
tatggcgcctatcccggctatggcgcgtacggcgctcctcccggacttggcgccgcgcct
ccgggtctccctcccccgccgcctcctcccccgggtgctcctcctggagctggtgttcct
tctggtctcgcgggtgggcttaacgccctcattcagcagtatgctaacccgtcggcgccc
ccgcctcccccgcccccggcgggagatgcgccgccccctcctccgccgccgatggacctg
cctccccctcctcctggcgcttag
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integrated database retrieval system
