Remersonia thermophila: 98124399
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Entry
98124399 CDS
T10833
Symbol
VTJ83DRAFT_3383
Name
(RefSeq) hypothetical protein
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
rthe Remersonia thermophila
Pathway
rthe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
98124399 (VTJ83DRAFT_3383)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98124399 (VTJ83DRAFT_3383)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
98124399 (VTJ83DRAFT_3383)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
98124399
NCBI-ProteinID:
XP_070867261
JGI:
Remth1_3383
LinkDB
All DBs
Position
3:join(2032429..2032528,2032731..2032794,2032853..2033078,2033192..2033398,2033456..2033660,2033713..2033793,2033856..2033920)
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AA seq
315 aa
AA seq
DB search
MAFDRGGRGGGRGGNFRGGPAGGRGGARGGARGGRGGAPGGRGRGGGGGRGGRGGGRGGR
GGKGGAGAKGGKKVIVEPHRHKGVFVARGGKEDLLATANLVPGESVYGEKRISVETAGKD
GAPATKIEYRIWNPFRSKLAAGILGGLETIYMKPGSKVLYLGAASGTSVSHVADIVGPTG
AVYAVEFSHRSGRDLINMATRRTNVIPIVEDARKPMAYRMLLPMVDVIFADVAQPDQARI
VGINARLFLKQGGGLLISIKASCIDSTAPPEQVFASEVQKLREDKFFPKEQLTLEPYERD
HAMVSCVYLQKEFEG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcctttgatcgcggtggacgtggcggtggccgtggaggcaacttccgcggcggccct
gctggtggtcgcggcggcgcgaggggcggtgcccgcggtggtcgtggtggtgcccccggt
ggtcgtggacgtggcggtggtggcggtcgcggtggccgtggaggtggtcgcggcggccgc
ggcggcaagggcggcgcgggcgcgaagggcggcaagaaggtcatcgtcgagccccatcgt
cacaagggcgtcttcgtcgctcgcggcggcaaggaggatctgctcgcgactgccaacctc
gttcccggcgagtcggtgtacggcgagaagaggatttcggtcgagactgctggcaaggac
ggcgcccctgccaccaagatcgagtaccgcatctggaaccctttccggagtaagcttgct
gccggtattctgggcggtctcgagaccatctacatgaagccgggctccaaggtcctctac
cttggtgccgcctcgggcacgtccgtctcccacgtcgccgacatcgtcggcccgaccggt
gctgtctacgctgtcgagttctcgcaccgttccggccgcgatctgatcaacatggctact
cgccgcaccaacgttatcccgatcgtcgaggacgctcgcaagcccatggcgtaccggatg
ttgctccccatggttgatgtcatcttcgccgatgttgcccagcccgaccaggccagaatt
gtcggtatcaacgccaggctgttcctgaagcagggcggcggcctcctcatctccatcaag
gccagctgcattgacagcaccgcgcctccggagcaggtgttcgcgagcgaagtccagaag
cttcgcgaggacaagttcttccccaaggaacagctcaccctggagccgtatgagcgtgac
cacgccatggtgtcttgcgtctacctccaaaaggagttcgagggctaa
DBGET
integrated database retrieval system
