Remersonia thermophila: 98124403
Help
Entry
98124403 CDS
T10833
Symbol
VTJ83DRAFT_3387
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
rthe Remersonia thermophila
Pathway
rthe04120
Ubiquitin mediated proteolysis
rthe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
98124403 (VTJ83DRAFT_3387)
04120 Ubiquitin mediated proteolysis
98124403 (VTJ83DRAFT_3387)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rthe04121
]
98124403 (VTJ83DRAFT_3387)
Enzymes [BR:
rthe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
98124403 (VTJ83DRAFT_3387)
Ubiquitin system [BR:
rthe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
98124403 (VTJ83DRAFT_3387)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
SKA1
zf-RING_11
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
98124403
NCBI-ProteinID:
XP_070867265
JGI:
Remth1_3387
LinkDB
All DBs
Position
3:join(2056255..2056290,2056468..2056572,2056649..2057333,2057417..2059263)
Genome browser
AA seq
890 aa
AA seq
DB search
MNNKMRIAWYAGASAALATAVVASAFYQRANFYSAMVHLSQSNLSVMVLVNLVFVVYSTL
IYFLQRLCFGPLRPAEIEQLYEKGWFAITETCLAMTIFRDEIGAFFLIMFTALVTGKVWG
WIGEGRVEVLEQQPPANPVWFHTRLSFSLLVSIAYDMWLLAYIVRTVVEEARPTMMVMFL
FEFAVLTVSSLHTAARYIVSLVEMRIVKTQTHQRLQERRRRVREQRDEILRRREAGDAAA
QNEELPDPDEVDEMDIEVPGWEAKGQWVLSLDLFTDFVKLSIYTAFFSILVTFYGLPIHI
MRDWFMTTRSFLKRLHALVRYRQALKHMSQYPDATAEDLGREDTCIICREEMRPWNPADP
TQVERSRAKKLPCGHVLHFGCLKSWLERQQVCPTCRRPVAQEGQQQAAPANGGPAMVLRL
GLGFPAGQNQPAQPAANGQAAPGGGQAAPGGGQAAPGGGQPAPGGAGGEHQPNQDRNVRM
FNLGPIRLGFAQGGVNEMQALAQRLQMEAGAANPPAAPPLAAAVPVPRQDGNDLNASLEQ
IRGQLQTLSQQVRQEMTSLHNAAQELQVMTLLMNELARLRQLQQQAPQGQPSTTQPAAPA
QHQTIVVHPPLIVPPAPAPTQLTASRPLVTRHIASGTGVAIPSGSPDLPEGVVIPPGWSL
LPLQRVGPDVVTPDPTTTTTTAAAAPPPPPSSSTTTQNAHSPAQEMLRSIFAHQPRSRGT
SPAPGSSLRPGAPGPAESSRRPGSRGSGASSAEPAARRQPPLVPAAPIPVAPPNWGGPGQ
LFGGGGGGDRAVSGPMFGYQIEPRQDGAHDEAGDEGNSSTNNTASDNSTPEEEEMTAAAV
TGVNGVAAGDGNTAAHVDAEEAGGNGSSGGDRRPRAVTVEEADEEDETER
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaagatgcgcatcgcctggtatgcaggggcctcggcagccctcgcgaccgcc
gtcgtcgcgtcggctttctaccagcgcgccaacttttattccgccatggtgcatctgtcg
cagagcaacctgtccgtcatggtcctggtcaacctcgtatttgtcgtctacagtaccctc
atctacttcctccaacgcctctgcttcggcccccttcgtcccgccgagatcgagcaactc
tacgagaagggttggttcgccatcaccgagacgtgcctggccatgaccatcttccgcgac
gagattggcgccttcttcctcatcatgtttaccgccctggtcacgggcaaggtctggggc
tggatcggcgaaggccgtgttgaggtgctcgagcagcagccccccgccaaccccgtctgg
ttccacacccgtctcagcttctcgctcttggtcagcatcgcctacgacatgtggctgctg
gcgtacattgtcagaaccgtggtcgaggaagcccgtcctaccatgatggtcatgtttctc
ttcgagttcgccgtcctgacggtctcgtcgcttcacaccgccgcccgctatatcgtctct
ctcgtggagatgcgcatcgtcaagacgcagacgcaccaacgcctccaagagaggcgccgc
cgcgtccgcgagcagagggatgagattctgcgcaggagggaagccggggacgccgctgcc
cagaacgaagagctgccggacccggacgaggtcgacgagatggatatcgaggtgccgggc
tgggaagccaagggccagtgggttctgtctttggatcttttcaccgattttgtcaaactc
agcatctacacggcgttcttctccatcctcgtcaccttttatgggcttcccatccacatc
atgagggattggttcatgacaacaagatcgttcctcaagaggcttcacgctctcgtgcgc
taccgccaggccctcaagcatatgagccaataccccgacgccaccgccgaagatttgggc
cgcgaagacacctgcatcatttgccgcgaggagatgcggccctggaaccccgccgatccc
acccaggttgagcggagccgcgcgaagaagctgccgtgcggccacgtcctccactttggc
tgcctcaagagctggttggagcgacagcaggtctgcccaacatgtcgtcgccccgtcgcc
caggaaggccagcagcaagcagcgccggccaacggcggccccgccatggtccttaggctg
gggttgggattccctgcgggtcaaaaccagccggcccagccggccgcgaacggccaagca
gcccctggcggaggccaagcagcccctggcggaggccaagcagcccctggcggaggccag
ccggcgccgggcggggccgggggagagcatcaaccgaatcaggataggaacgttcggatg
ttcaatctcgggccgatccggctgggctttgctcaaggcggagttaacgagatgcaggcc
ctggcgcaacggttgcagatggaagccggcgcggcgaatcccccagccgcccctcctctc
gccgctgcggtccccgtgccgcgccaggacggcaacgatttgaacgccagcctcgagcag
atccgcggtcagctccagaccctcagccaacaggtccggcaggagatgacgagcctgcac
aacgcggcgcaggagcttcaggtcatgacccttttgatgaacgaacttgctcgtttgcgt
cagctacaacagcaggccccgcagggccagccatccacgacgcaacccgccgcgccagca
caacaccagacaatcgttgtgcatccaccattaatagtaccgcctgcccccgcacccaca
cagcttacagcctcgcggccgcttgttactaggcatatcgcctctgggaccggagtggcg
atcccgtccggcagccctgacctgccggagggtgtcgtgattcctccaggctggtcgttg
cttccgcttcaacgagtgggacccgatgttgtgacccctgatccaacaacgacaacaact
acagcagcagcagcaccaccaccaccaccatcatcatcaacaacaacacagaacgcacac
tcacccgcccaggagatgctgcggtctatttttgctcaccaacctcgctcccggggcacc
agtcccgcaccaggatccagcctgagaccgggcgcgccaggccctgcagaatcctcgcgc
aggccaggatcacggggcagcggcgcgtcttcagcagagccggcagctcgtaggcagccg
ccgctcgtcccggcggccccgatccccgtggcgccacccaactggggaggccccggccaa
ctgtttggtggtggtggcggcggcgatcgggccgttagtggaccaatgtttgggtatcag
attgagcctcgtcaggatggagcacacgacgaggcaggggacgaaggcaacagcagtacc
aacaatactgctagcgacaacagcacccccgaagaggaggagatgacggcggcggcagtg
accggggtgaatggggttgcggctggagatgggaacactgccgcgcatgtcgatgcagag
gaggctggaggaaatgggagtagcggtggcgatcgaaggccaagagcggtgacagtggag
gaggcggatgaggaggatgagactgagcgttga
DBGET
integrated database retrieval system
