KEGG   Remersonia thermophila: 98124494
Entry
98124494          CDS       T10833                                 
Symbol
VTJ83DRAFT_3469
Name
(RefSeq) hypothetical protein
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
rthe  Remersonia thermophila
Pathway
rthe03022  Basal transcription factors
rthe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    98124494 (VTJ83DRAFT_3469)
  09124 Replication and repair
   03420 Nucleotide excision repair
    98124494 (VTJ83DRAFT_3469)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rthe01001]
    98124494 (VTJ83DRAFT_3469)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rthe03021]
    98124494 (VTJ83DRAFT_3469)
   03019 Messenger RNA biogenesis [BR:rthe03019]
    98124494 (VTJ83DRAFT_3469)
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98124494 (VTJ83DRAFT_3469)
Enzymes [BR:rthe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     98124494 (VTJ83DRAFT_3469)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     98124494 (VTJ83DRAFT_3469)
Protein kinases [BR:rthe01001]
 Serine/threonine kinases: CMGC group
  CDK family
   98124494 (VTJ83DRAFT_3469)
Transcription machinery [BR:rthe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     98124494 (VTJ83DRAFT_3469)
Messenger RNA biogenesis [BR:rthe03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     98124494 (VTJ83DRAFT_3469)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     98124494 (VTJ83DRAFT_3469)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Kinase-like
Other DBs
NCBI-GeneID: 98124494
NCBI-ProteinID: XP_070867347
JGI: Remth1_3469
LinkDB
Position
3:2308742..2310007
AA seq 421 aa
MAVSPLVAPTAQSSAFKRQPSAVPSSTGGTPLPSNAAPTSHPQPSSSSSQSLLRHGPAGP
LTLDPIEQLNEDEKRKYVKGKKLGEGTYANVYLGHARHDPSVLVAIKKIKVQQQYQDGMA
PDAVRELKYLRELRHPNIISLLSVFSSKDQNLNLVLEYLPLGDLEMLIRDVDRVRYGAGD
IKAWMGMLARAVWFCHDNYVLHRDIKPNNLLIAADGEVKLADFGLARGFADPGRRMTANV
ITRWYRPPELLFGARHYGAAVDMWSVGMVFAELIIRAPFLAGNTEVEQIALICKHIGTPT
EEVWPGVTRLREYTVPSEVVPVWPKDAYMGRFGAVGADGVDLLVRTLALDPKKRISAREM
LEHRWWRTDPKPTRKEDLPRKSAGGEDKMGADLKRRPGVVEDEGAPRGQRVARKLDFGIA
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggccgtttcccccctcgtggcgccgaccgcgcaatcctccgccttcaagcgtcaaccg
tccgccgtgccctcctccaccggcggcacgcctcttccctccaatgccgcgcccacctcg
catccccagccgtcgtcgtcgtcgtcgcaatccctcctccgccacggcccggcgggaccc
ctgaccctcgacccgatcgagcagctcaacgaggacgagaagcgcaagtacgtcaagggc
aagaagctcggcgagggcacctacgccaacgtctacctcggccacgcgcggcacgacccg
tcggtcctggtggccatcaagaagatcaaggtccagcagcagtaccaggacggcatggcg
cccgacgcggtgcgcgagctcaagtacctgcgcgagctgcgccaccccaacatcatttcg
ctgctgtccgtcttcagctccaaggaccagaacctcaacctcgtcctcgagtacctgccc
ctcggcgacctcgagatgctgatccgcgacgtcgaccgcgtccgctacggcgcgggggac
atcaaggcctggatgggcatgctcgcccgcgccgtctggttctgccacgacaactacgtt
ctgcaccgcgacatcaagcccaacaacctgctcatcgccgccgacggcgaggtcaagctc
gccgactttggcctggcgcgcggcttcgccgacccgggccgccgcatgacggccaacgtc
atcacccgctggtaccgcccgcccgagctgctgtttggggcccgccactacggcgccgcc
gtcgacatgtggtccgtcggcatggtgttcgccgagctcatcatccgcgcccccttcctg
gccggcaacaccgaggtcgagcagatcgccctcatctgcaagcacatcggcaccccgacc
gaggaggtctggcccggcgtcacccgcctgcgcgagtacacggtgcccagcgaggtggtc
cccgtctggcccaaggacgcctacatggggaggttcggcgccgtcggcgccgacggcgtc
gatctgctcgtgcgaacgctcgccctggatcccaagaagcgcatctcggccagggagatg
ctcgagcaccggtggtggaggacggaccccaagcccacccgcaaggaggacctgccgagg
aagtcggccggcggggaggacaagatgggggccgacctgaagcgaaggccgggcgtggtg
gaggacgaaggcgcgccgagggggcagagggtggcgaggaagctggattttggcatcgcc
aagtag

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