Remersonia thermophila: 98124498
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Entry
98124498 CDS
T10833
Symbol
VTJ83DRAFT_3472
Name
(RefSeq) hypothetical protein
KO
K15071
recyclin-1
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rthe04121
]
98124498 (VTJ83DRAFT_3472)
Ubiquitin system [BR:
rthe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
98124498 (VTJ83DRAFT_3472)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec10_HB
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
98124498
NCBI-ProteinID:
XP_070867350
JGI:
Remth1_3472
LinkDB
All DBs
Position
3:join(2316113..2316236,2316345..2319226)
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AA seq
1001 aa
AA seq
DB search
MSVAAGRTASSGPPAAPRLSTSILQTLQATEIIESKPFLPAEILAAILDYLPVADQIRFA
RTSRRMREMVYDDFRWVARLKSMGCWDEAEARRRFEEAMRKRRTLQAAAAAGAAGTAGAG
PGAGPGAATVESRGGAGAGKRESLLFDAGLEEERRRKMLEQERLRQQQLPLAELADGFET
MTVTGTAPTQQDPSRDPEALLQVLKNVRSIRGMARQEYGKIYGALAPFYFDLVSAKSHTD
PLVFKVFRDPERQAQMLASLRTFARSDWAQGAQKREEKLETMAGIFESAVLREFEHGYEF
WDVDGRMRKYAHVLDLLNGGNGGGGGAAVDLFIQKHPLFSDREVLANPMECVNQTLADTI
TLEPSRLFFEKLALKVNEQAGVIGRIFPDPVRVFWAFVDKVREDIITDYATPLFDETHER
SIPSYLRAVSGIFEQALHFFRTVTPPTTGPLDPLQQKEQKQHQEAMARELALKLFEPHLD
LYLQDELDEFTRHAEREVGDWEKKLTEQDASAESFYMGSFANRQADKKDFLTSFKKVVMM
PVTVLPTTLTTFSLPGLSSSSSSAAAASKSASTNGSSLQPSSQQASRAQSPAPDRSSIPM
PPGGKAAPTDELAAKAALMTSRLEGIRSLFSLEVALNLVHAAKASLGRVAVFVQLGGQAG
AEAREQCSAIFVALLRILGGRHVKPGFDRAVAHLSQYNPREVQKHHDEEGKGGVAPLVTF
IELVNVGDLISQMIDVFYEQQLVGPKLADRNDFLDPAGLAKKKFEQMLDESVAAGLNKGI
DVLMDEVEYICATTQLPTDYNPGAAGGMPDGSSAASASASSLPSPDKTPSSLSYFPSQAS
SAVTDTDIGPTPTARRVRDLVASHTSMLVGSTDKSMLDVFNAEVGLRLFNAVCKHLKRQR
ISTEGAIKLIADMNLYFEYIRTLKNADLLPYFKALRELSQLYLIDARMHAKDMATIMADG
DRFAGVFRPEEVYEYAERRADWYQVKREVERAMYGLECCVM
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagcagcgggaagaacggcctcgtccgggcccccggcggctccgaggctgtcc
accagcatcctccaaaccctccaggccaccgagatcatcgagtccaagcccttcctgcca
gccgaaatcctcgccgccatcctcgactacctccccgtcgccgaccagatccgcttcgct
cgcacctcccgtcgcatgcgcgagatggtatacgatgacttccgctgggtggcccgtctt
aagagcatgggctgctgggacgaggccgaagcacgcaggcggtttgaggaggccatgcga
aagcgccggactctgcaggctgctgctgctgctggtgccgctggtaccgctggtgccggg
cctggggccggccccggggcggcaacggttgagagccgcggtggtgctggggcagggaag
agggaaagcctgttgttcgacgccgggttggaggaggaaaggcggcgcaagatgctggaa
caggagaggctacggcagcaacagctacctttggccgagctagcggacgggttcgaaacc
atgacggtgaccgggacggcacccacgcaacaggacccctctcgagaccccgaggcgctg
ctgcaggtcctcaaaaacgtccgcagcattcgcggcatggctcggcaggagtacggcaaa
atctacggcgccctggcccccttctacttcgacctcgtgagcgccaaatcccacaccgac
cccctcgtcttcaaggtctttcgcgaccccgaacgccaggcccagatgctggccagcctg
cgcacctttgctcgcagcgactgggctcagggtgcccagaagcgcgaggagaagctcgag
accatggccggcatctttgagagcgccgtcctgcgagagtttgagcacggatacgagttc
tgggatgtcgacggccgcatgcgcaagtacgcgcacgtgctggacctgctcaacggcggc
aacggcggcggcggcggggccgccgtggacttgttcatccagaagcaccccctcttctcg
gaccgcgaggtgctcgccaaccccatggagtgcgtcaaccagaccctggcggataccatc
acgctcgaaccgtcgcggctcttcttcgagaagctcgcgctcaaagtgaacgagcaggcc
ggggtcatcggccgcatcttccccgacccggtccgcgtgttttgggccttcgtcgacaag
gtccgcgaggacatcatcaccgactatgcgacgccgctgttcgacgagacccacgagcgg
agcatcccgtcgtacctgcgtgccgtgtcgggcatctttgagcaggcgctacacttcttc
cgcaccgtaacgccgccaacgaccggcccgctggacccgctgcagcaaaaggagcaaaag
caacaccaggaggccatggcccgcgagctggcgctcaagctgttcgagccgcacctggac
ctgtacctccaggacgagctggacgagttcacccgccacgccgagcgcgaggtcggcgac
tgggagaagaagctgacggagcaggacgccagcgcagagtccttctacatgggcagcttc
gccaatcgccaggccgacaagaaggactttttgacgtccttcaagaaggtcgtcatgatg
cccgtcacggtcctcccgacgaccctgaccaccttctcgctgccaggcttgtcctcgtcg
tcgtcgtcggcggcggcggcgagcaagtcggcctcaaccaacggcagcagcctgcagccg
tcgagccagcaggcgtcgcgggcgcaatctccggcccccgaccgcagcagcatcccgatg
ccgcccggcggcaaggccgcgcccaccgacgagctcgccgccaaggcggccctcatgacc
tcccggctcgagggcatcaggtcgctcttcagcctcgaggtcgcgctcaacctggtgcac
gcggccaaggccagcctcggccgcgtcgccgtcttcgtgcagctcggcgggcaggccggc
gccgaggcgcgcgagcagtgctcggccatcttcgtcgccctcctccgcatcctgggcggg
aggcacgtcaagcccggcttcgaccgcgccgtggcgcatctgagccagtacaacccccgc
gaggtgcagaagcatcacgacgaggaaggcaagggaggggtggcgccgctcgtgaccttc
atcgagctggtcaacgtcggcgatctcatctcccagatgatcgacgtgttttacgagcag
cagctggtcgggcccaagctggcggaccggaacgactttttggatcccgccggcctggct
aagaagaagtttgagcagatgctcgacgagagcgtcgccgcggggctcaacaagggcatc
gacgtgctgatggacgaggtcgagtacatctgcgccacgacgcagctgccgacggactac
aacccgggcgcggccggaggcatgccggacggttcgtcggcggcctcggcgtcggcctcg
tcgctgccgtcccccgacaagacgccctcgtcgctctcctacttcccctcccaagcctcc
tccgccgtcaccgacaccgacatcggccccaccccgacggcccgccgcgtccgcgacctc
gtcgcctcccacacctccatgctcgtcggcagcaccgacaagtccatgctcgacgtcttc
aacgccgaggtcggcctgcgcctcttcaacgccgtgtgcaagcacctcaagcgccagcgc
atcagcaccgagggcgccatcaagctcatcgccgacatgaacctctactttgagtacata
cgcacgctcaagaacgcggacctgctgccctacttcaaggcgctgcgcgagctgagccag
ctgtacctcatcgacgcgcgcatgcacgccaaggacatggccaccatcatggccgacggc
gatcggttcgccggcgtcttccggcccgaggaggtgtacgagtatgccgagaggagggcc
gactggtaccaggtcaagagggaggtggagagggccatgtacgggctggagtgttgtgtg
atgtaa
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