Remersonia thermophila: 98124543
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Entry
98124543 CDS
T10833
Symbol
VTJ83DRAFT_3512
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rthe03016
]
98124543 (VTJ83DRAFT_3512)
Transfer RNA biogenesis [BR:
rthe03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
98124543 (VTJ83DRAFT_3512)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
WDR55
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
98124543
NCBI-ProteinID:
XP_070867390
JGI:
Remth1_3512
LinkDB
All DBs
Position
3:join(2467972..2468103,2468174..2470666)
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AA seq
874 aa
AA seq
DB search
MAEAIVERRYLSAGSNRYAGAADWSQDGLVAFGSDSNVCLWDPRDPRGISQILSGHTAHV
RAVTFLPRHDGDKTLYLATGGDDKQLRLWAIDAASGSASCLQSVQEHSGPINRIAALLYP
AAGNARRRIVVTGAADATVKVWAFDGAQVALLQTIKTARRFMPLAVALHGWDDGGLVLAV
AGTTNAIHIFTASPPADDGNDAAAGPEFTPQAALPGHENWIGSLDFVREKPEPDSDVLLA
SASQDKYIRLWRIHQGTALSALNAGGLALTTDALTLTNKIHKISAGATRYCVMFEALLLG
HEDWIYTARWNRAADGRLQLLSASADNSLAVWEPDPGSGIWITAARLGEISREKGATTAT
GSIGGFWTGLWSPGGAAVITLGRTGSWRRWDYDAAEDAWKQTFAVSGHTRAVTGVSWSPD
GAYLLSTSSDQTTRLHAPWLAGPSASAGSAPSWHEMARPQIHGYDLNCISALGPTSFVSG
ADEKLMRVFAEPRAVARLLNRLAGAAAPLDQDPSASSSLSARLVPDAADMPVLGLSNKAV
TDVAAPLPDAPADGAAGEPAELAPEQDAVRKVSALDALAHPPLEESLSRHTLWPETEKLY
GHGYELSCLAATRDGGLIASACRASSLNHAVVRVFETARWTELHPPLPSHALTVTRLRFS
EDDALLLSVGRDRAWAVWRRRRRGRQAGEGGERTNPLELAQANAKGHSRMVLDGAWAPVV
RLPAPEGTGAGDGAEAEAEVVRVFATAGRDKTVKVWVRKGDGEGVQFEPGPVVTEEHAVT
AVDFVPEVTADGRLLLAVGTEAGRLAVLALRVAADGQGAKAEVVETWRVPAPLCLPKAVL
QLAWRPRRGDAAAERELAIAGEDGSLRIYAFPGL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccatcgtagagaggcgctacctctccgccgggtccaataggtatgccggg
gcggcggactggagccaagatggcctcgttgcgtttggatccgattccaacgtctgtctt
tgggaccccagggatcctcgaggcatctcacagatcctcagcgggcacacggcccacgtg
cgtgccgtgacctttctgcctcggcacgacggcgacaagacgctgtatctggccacgggc
ggcgacgacaagcagctccggctgtgggccatcgacgccgcctcggggtccgcttcgtgc
ctccagagcgtccaggagcactcgggccccatcaaccgcatcgccgccctcttgtacccg
gcagccgggaacgccaggagacgcatcgtcgtcacgggcgccgccgatgccaccgtcaag
gtgtgggctttcgacggcgcccaggtcgccctcctccagaccatcaagacggccaggagg
tttatgcccctggccgtcgccctgcacggctgggacgatggcggccttgtcctggccgtc
gccggcaccaccaacgccatccacatcttcacggccagccccccggccgacgacggcaac
gacgccgccgccggccccgagttcaccccccaggccgcgttgccgggccacgagaactgg
atcggctcgctcgacttcgtccgcgagaagcccgaacccgacagcgacgtgctgctggcc
tcggcgagccaggacaagtacatccggctctggcgcatccaccagggcacggcgctctcg
gcgctcaacgccggcgggctggccctcacgacggacgccctgacgctgaccaacaagatc
cacaagatctcggccggggcgacgcgatactgcgtcatgtttgaggccttgctgctgggc
cacgaggactggatctacacggcacgctggaaccgagcggccgacggccgcctgcagctc
ctgtcggcctcggccgacaactcgctggcggtgtgggagccggaccccgggtcgggcatt
tggatcacggccgcccgcctcggcgagatcagccgcgagaagggcgccaccacggccacg
gggagcatcggcggcttctggaccggcctgtggtcgcccgggggcgccgccgtcatcacc
ctgggccgcaccggcagctggcgccgatgggactacgacgccgccgaggacgcctggaag
cagacctttgccgtctcgggccacacgcgcgccgtcacgggcgtttcgtggtccccggac
ggcgcgtacctgctctccaccagctccgaccagaccacccgcctgcacgccccgtggctc
gccggaccgtccgcctcggccggctcggccccgtcgtggcacgagatggcgcgcccgcag
atccacggctacgacctcaactgcatctccgcgctcgggcccacctccttcgtctcgggc
gccgacgagaagctgatgcgcgtcttcgccgagcccagggccgtcgcccgcctgctgaac
cgcctcgccggcgcggcggcgcccctcgaccaagacccctccgcctcctcctcgttgtcg
gcccgcctcgtccctgacgccgccgacatgcccgtcctcggcctctccaacaaggccgtc
accgacgttgccgccccgctcccggacgcgcccgccgacggcgccgccggcgagccggcc
gagctcgcccccgagcaggacgccgtccgcaaggtgtccgccctggacgccctcgcccac
cccccgctcgaggagtcgctgtcgcgccacacgctctggcccgagacggagaagctctac
gggcacggctacgagctctcgtgcctcgccgccacgcgcgacggcgggctgatcgcgagc
gcctgccgcgccagctcgctcaaccacgccgtggtgcgcgtgtttgagacggcgcggtgg
acggagctgcacccgcccctgccgtcgcacgcgctgaccgtgacgcggctgcggttctcg
gaggacgacgcgctgctgctgagcgtgggcagggatcgcgcgtgggccgtctggcggcgg
cggcggagggggcggcaggccggggaagggggcgagaggacgaacccgttggagctggcg
caggcgaacgccaaggggcattccaggatggtgctggatggcgcctgggcgcccgtggtg
cgcctgcctgcccccgaggggacgggcgccggcgacggcgcggaggcggaggcggaggtg
gtgagggtgtttgccacggcggggagggataagacggtcaaggtgtgggttcgcaagggg
gatggggagggcgtgcagttcgagccggggcccgtggtgacggaagagcatgccgtgacg
gcggtcgattttgtgcccgaggtcacggccgacgggaggctgctcttggccgttggcacc
gaggccgggcggctcgccgttctggcgctgcgggttgccgccgacggccaaggagccaag
gcggaggtggttgagacgtggcgggtgccggctccgctgtgcttgcccaaggcggtgctg
cagctggcgtggaggccgaggaggggggacgccgcggccgagagggagctggcgattgcg
ggggaggacgggtcgttgaggatatatgctttccccggcttgtag
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