KEGG   Remersonia thermophila: 98124546
Entry
98124546          CDS       T10833                                 
Symbol
VTJ83DRAFT_3515
Name
(RefSeq) hypothetical protein
  KO
K12831  splicing factor 3B subunit 4
Organism
rthe  Remersonia thermophila
Pathway
rthe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    98124546 (VTJ83DRAFT_3515)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rthe03041]
    98124546 (VTJ83DRAFT_3515)
Spliceosome [BR:rthe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    98124546 (VTJ83DRAFT_3515)
 Complex B
    98124546 (VTJ83DRAFT_3515)
 Complex C
   U2 SnRNP specific factors
    98124546 (VTJ83DRAFT_3515)
SSDB
Motif
Pfam: RRM_1 OB_RNB RRM_7 RRM_5 RBD_DEAH11
Other DBs
NCBI-GeneID: 98124546
NCBI-ProteinID: XP_070867393
JGI: Remth1_3515
LinkDB
Position
3:join(2473689..2473705,2473770..2474471,2474749..2474965)
AA seq 311 aa
MASRHWEQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEF
DTPASAEYASKVLNGIRIWGKPIRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTF
SQFGTILRQPNVVRDDKNISKGYGFVSFDSFEASDAAIATMNGQYLLSKAITVEYAYKKD
GKGERHGDEAERKLAAEGKKHNILPEKQALPPAFHMTAPVGSAAAPALPPTGPAAAVAPS
HGGFGGPVGGFPQHPPAGFPGAQPPMYPGMPPPPAGFGGPVPPPGAPMAAPPGFAPPGFA
APPPPPGFGRR
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcgtcaagacattgggaacaaaataaggacgccaccgtctacgtcggcaacatcgac
gagcgcttcacccaggagctgctctcggagctcatgacccaggtcggccccgtccgccag
gtccacatgccccaggaccgcgtctcccagacgcaccagggctacggcttcgtcgagttc
gacacgcccgcctcggccgagtatgcctccaaggtgctcaacggcatccgcatctggggc
aagcccatccgcgtcaacaaggccagcgccgacaagcaaaagacggtcgacatcggcgcc
gagctcttcatcaacaacctcgacccccaggtcgacgaaaagatcctctacgacaccttt
agccagttcggcaccatcctgcgccagcccaacgtcgtccgcgacgacaagaacatctcc
aagggctacggcttcgtcagcttcgactccttcgaggccagcgacgccgccatcgccacc
atgaacggccagtacctgctcagcaaggccatcaccgtcgagtacgcctacaagaaggac
ggcaagggcgagcgccacggcgacgaggccgaacgcaagctcgccgccgagggcaagaag
cacaacatcctccccgagaagcaggccctccccccggccttccacatgaccgccccggtc
ggctccgccgccgcccccgcccttcccccgaccgggcccgctgccgcggtcgcgccgtcc
cacggcggcttcggcggtcctgtcggcgggttcccccagcacccgcctgccggcttccct
ggcgcgcagccccccatgtacccgggcatgccgcccccgcccgccggctttggaggtccg
gtaccgccacccggcgctcccatggccgccccgccggggttcgcgcccccaggctttgcc
gccccgccgcctcccccggggtttgggaggcggtaa

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