Remersonia thermophila: 98124685
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Entry
98124685 CDS
T10833
Symbol
VTJ83DRAFT_3640
Name
(RefSeq) hypothetical protein
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
rthe Remersonia thermophila
Pathway
rthe03250
Viral life cycle - HIV-1
rthe03272
Virion - Hepatitis viruses
rthe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
98124685 (VTJ83DRAFT_3640)
03272 Virion - Hepatitis viruses
98124685 (VTJ83DRAFT_3640)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
98124685 (VTJ83DRAFT_3640)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98124685 (VTJ83DRAFT_3640)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98124685 (VTJ83DRAFT_3640)
Membrane trafficking [BR:
rthe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
98124685 (VTJ83DRAFT_3640)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
Check point factors
Other check point factors
98124685 (VTJ83DRAFT_3640)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
RuvB_N
AAA_5
RNA_helicase
AAA_14
TIP49
AAA_22
DUF815
AAA_25
IstB_IS21
AAA_17
AAA_2
NPHP3_N
AAA_33
AAA_18
AAA_24
nSTAND3
Parvo_NS1
NACHT
AAA_7
Mg_chelatase
AAA_28
Torsin
ATPase_2
PhoH
DUF5906
bpMoxR
USP8_dimer
Motif
Other DBs
NCBI-GeneID:
98124685
NCBI-ProteinID:
XP_070867518
JGI:
Remth1_3640
LinkDB
All DBs
Position
3:join(2912467..2913113,2913182..2913632,2913709..2913930)
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AA seq
439 aa
AA seq
DB search
MSNTDFLDRAIKQVRLAIDADNAGQYEKAYQLYYQSLELFLLALKWEKNPKSKEMIRAKT
GEYMDRAEKLKAHLADVEAKRKKPGMVGANGTSTGGTGKGQVAGEDGGGDGLDEDSRKLR
SALAGAILQERPNVSWDDVAGLEAAKEALKEAVLLPIKFPHLFQGKRQPWKGILLYGPPG
TGKSYLAKAVATEAKSTFFSVSSSDLVSKWMGESERLVRQLFAMARENKPSIIFIDEIDA
LCGPRGEGESEASRRIKTEMLVQMDGVGKDSKGVLILGATNIPWQLDAAIRRRFQRRVHI
GLPDLAARTTMFKLAVADTITALKPEDYRELAKASEGYSGSDISIVVQDALMQPIRKIQQ
ATHFKRVTVDGKPKLTPCSPGDPDAEEMTWEKVPSDELLEPVVEKKDFIRAIKASRPTVS
QEDLVRNEEWTKEFGSEGA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccgacttcctagaccgcgcaataaaacaggtccgcctcgccatcgacgcc
gacaatgcgggccagtatgagaaggcgtaccagctctactaccagtccctcgagctcttc
ctcctggcgctcaagtgggagaagaaccccaagtccaaggagatgatccgcgccaagacg
ggcgagtacatggaccgcgccgagaagctcaaggcgcacctcgccgacgtggaagccaag
cgcaagaaaccaggaatggtgggcgctaacggcacctcgacgggcggcaccggcaagggc
caggtggcgggcgaggacggcgggggagacgggctggatgaggatagccgcaagctgcgc
agcgctcttgccggtgcgattctgcaggagaggccaaatgtgagctgggacgatgtggcg
ggtctcgaggctgccaaggaagccctcaaagaggccgtgctgctgcccatcaagtttccc
cacctgtttcaggggaagagacagccgtggaaggggattctgctctacgggccgccgggg
acgggtaagagttacctggccaaggccgtcgcgacggaggccaagagcaccttcttcagc
gtgagcagctccgatctggtgagcaagtggatgggtgagagcgaaaggctagtccggcag
ctctttgccatggctcgcgagaataagccttccatcatcttcattgacgagatcgacgcc
ctctgcggccctcgcggcgagggcgaatccgaggcctcccgccgcatcaagacggaaatg
ctcgtccagatggacggtgtcggcaaggatagcaagggcgtcctcatcctcggcgccacc
aacatcccgtggcagctggatgcggccatccgtcgtcgcttccagcgccgcgtgcacatc
ggcctgccggacctggcggcacgcaccaccatgttcaagcttgccgtggcagataccatc
acggcgctgaagccggaagactaccgggagcttgccaaggcgtcggaggggtactcgggg
tccgatatcagcatcgtggtgcaggacgctctcatgcagccaatacgcaagatccagcag
gcgacacacttcaagcgggtcaccgtagacggcaagccgaagctcaccccctgctccccc
ggcgacccggacgccgaggagatgacgtgggaaaaggttccctccgacgagcttctggag
ccggtcgttgagaagaaggacttcatccgcgccatcaaggccagcaggccgaccgtgtcg
caagaggacttggtgcggaacgaagaatggaccaaggagtttggtagcgagggtgcttga
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