Remersonia thermophila: 98124704
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Entry
98124704 CDS
T10833
Symbol
VTJ83DRAFT_3658
Name
(RefSeq) hypothetical protein
KO
K11360
transcriptional activator SPT8
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98124704 (VTJ83DRAFT_3658)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98124704 (VTJ83DRAFT_3658)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
98124704 (VTJ83DRAFT_3658)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
98124704 (VTJ83DRAFT_3658)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_RFWD3
NBCH_WD40
WD40_2
Motif
Other DBs
NCBI-GeneID:
98124704
NCBI-ProteinID:
XP_070867536
JGI:
Remth1_3658
LinkDB
All DBs
Position
3:complement(2966930..2969125)
Genome browser
AA seq
731 aa
AA seq
DB search
MDDDYASSDNEQDELMEDAEDLDADNDADEDNEEEDEDVEDQDEPDNEPEAEPEAEAEAE
AEGEAEAEGDAEGEPGSDAQTVGRDAAARASAAPTTPGSASKWRPVLRQEYIDAQLYDIV
PTMAAPQATSINAMAITPDLRYWLTGGSDGYIRKYDGMGTINGKQQLTVAQRHPFVDSVV
KAGVLMSYWENEEPAPPHARPEDRVLSPVYSLAVHSGALWLLSGLESGGINLQSVRHDEG
KRIHCLQGGHNNAVSVLQLAPDEKSVLSGSWDKTVLDWDLNNGNIIRRFEGSGGQISAIE
LRPASGAPIPAEAGVVQPKSETFFAETKPRVNSFFTAENANGTDHGANDGGTAGSPEHES
LFGSPGGSLFGDNDTIGGGGAFGEDDDEFSRAMLQDDTNNGLDHSGDFTMGEAEMTQGSA
MDLGAPSSTDPPPSSAQNGTTSQPDPQDDDTSNGDTVMGGTAQAASTEPDAGGDTAHQPP
SSSSDLTAQPSSSLTTTTTTAAAAAAATTTAAADAAAADGTSVSEPPSQPPPASPSMVLS
SAPPPTHADPTQTSASTFLSAAIDGTIRIWDRRAPDPVARINNRRGVPPWCMGACWSPDG
NFLYAGRRNGTVEEFSIHKATSSWQPERTLKFPAGSGAVSCVRSMPNGRHLVCASHDILR
LYDLQAEEKGASFKHSKVPFIIIPGPPRAGVISQLYVDPTCRIMISTAGTRGWDGSSTEV
MIGYEITVPKP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactatgctagctccgacaatgagcaggacgagctcatggaagatgccgag
gacctcgacgccgacaacgacgctgacgaggacaacgaagaggaagacgaggatgtcgaa
gaccaggacgagccggacaacgaacccgaggcggaacctgaggccgaggccgaagccgag
gctgagggagaggcagaggcagagggcgacgcagagggcgagccaggttcagacgcccag
accgtcggccgggacgcggcagcaagagcatcggcagcgcctacgacaccaggctccgcg
tcgaaatggcgacccgtcctgcgccaggaatacatcgacgcacagctctacgacattgtg
cccaccatggccgcgccccaagccaccagcatcaacgccatggccatcaccccggacctg
cggtactggctaacgggcggctccgacggctacatccgcaagtacgacggcatgggcacc
atcaacggcaagcagcagctcaccgtcgcccagcgccatcccttcgtcgacagcgttgtc
aaggccggcgtgctcatgagctactgggagaacgaggagcccgcccctccccacgcccgc
cccgaggaccgcgtgctgtcccccgtgtacagcctggccgtgcacagcggcgctctgtgg
ctgctgagcgggctcgagagcggcggtatcaacctgcagagcgtgcgccacgacgagggc
aagaggatacactgcctgcagggcggccacaacaacgccgtcagcgtgctgcagctggcg
cccgacgagaagagcgtcctcagcggcagctgggacaagacggttctggattgggacctc
aacaatggaaacatcatccgtcgcttcgaggggagcggcggccagatctccgccattgag
ctgcgcccggccagcggcgccccgatcccggccgaggcaggcgtggtccagcccaagagc
gagactttcttcgccgagaccaagccccgcgtgaacagcttcttcaccgctgagaacgcg
aatggcacggatcacggcgccaacgatggcggcacggccggatcaccggagcacgagtcc
ctgtttggtagtccgggcgggtcgctgtttggtgacaacgacaccatcggcggcggaggg
gccttcggagaggacgatgacgagttctccagggccatgcttcaggatgataccaacaac
ggcctggaccactctggcgacttcaccatgggcgaagccgagatgacacaggggtctgcg
atggaccttggtgcgccgtcttcgaccgatccaccaccatcctccgcgcagaacggaacg
accagccagcccgacccgcaggatgatgatacctctaacggcgacacggtaatgggcgga
acagcgcaagcagcgtcgaccgaaccggacgcaggcggcgacaccgctcaccaaccaccg
tcttcttcctccgacctgacagcccaaccctcctcctccctaaccaccaccaccaccacc
gccgccgccgccgccgccgccaccaccactgctgctgctgatgctgctgctgccgatggc
acctccgtgtcagaacccccctcccaaccaccccccgcctcgccatccatggtcctctcc
tccgctcctcctccaacacacgccgatcccacccaaacctcggccagcaccttcctctcg
gccgccatcgacggcaccatccgcatctgggaccggcgcgcccccgaccccgtcgcgcgc
atcaacaaccgccgcggcgtgccgccctggtgcatgggcgcgtgctggtcgcccgacggc
aacttcctctacgccgggcgcaggaacggcaccgtcgaggaattttccatccacaaggcc
acgagctcgtggcagcccgagcggacgctcaagttccccgccggctcgggcgccgtcagc
tgcgtgcgctccatgcccaacgggcggcacctcgtgtgcgcgtcgcacgacatcctgcgg
ctgtacgacctccaggccgaggagaagggggcgtccttcaagcacagcaaggtgcccttc
atcatcatcccgggcccgccgcgggccggcgtcatcagccagctctacgtggatccgacg
tgccgcatcatgatctcgacggcggggacgagggggtgggatgggtcttcgaccgaggtc
atgatcgggtacgagattaccgtgcccaagccctag
DBGET
integrated database retrieval system
