Remersonia thermophila: 98124988
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Entry
98124988 CDS
T10833
Symbol
VTJ83DRAFT_3913
Name
(RefSeq) hypothetical protein
KO
K07204
regulatory associated protein of mTOR
Organism
rthe Remersonia thermophila
Pathway
rthe04136
Autophagy - other
rthe04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
98124988 (VTJ83DRAFT_3913)
04136 Autophagy - other
98124988 (VTJ83DRAFT_3913)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98124988 (VTJ83DRAFT_3913)
Membrane trafficking [BR:
rthe04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
98124988 (VTJ83DRAFT_3913)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
BBS2_Mid
HEAT
Beta-prop_DCAF4
Beta-prop_BBS7
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
98124988
NCBI-ProteinID:
XP_070867791
JGI:
Remth1_3913
LinkDB
All DBs
Position
3:join(3826203..3826772,3826837..3827776,3827871..3830556,3830638..3830851)
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AA seq
1469 aa
AA seq
DB search
MTAISLDVPPSSQSGRHQVSAQFARNAALAGPSIAASPLRHPGSFARQTTHAVSHLQAQY
AEVSGAAAAQTHGFATAQPTWNPPLHQQWPQRQEQNREANQQSSLPHAPPARRPSSAPDP
ERTAAAASQSVGEETDEDGLAIVAAPKRPPLTRPRSERGARNADEDYDMGARHGFDDHYL
SEDVIAHLANNWYMYFTDKRHETSGKPKTPAFELQDWRMRDRLKTVSAAIAVCLNIGVEP
PDQLRTTPGAKLEAWQDPNVPPVGKALENIGKALEAQYVTLALRTRYKQYLDPSIEETKK
FCVSLRRNAKDERVLFHYNGHGVPKPTASGEIWVFNKNYTQYIPVSLYDLQQWLQAPTIF
VWDCSEAGNILKNYGKFVEKHEIEEEEQAAQDPNHEKVNFRPYIHLAACDSKQNLPTNPQ
LPADLFTCCLTTPIEMALWFFVLQNPLHSDITPERARKLPGRLQERRTPLGELNWIFTAI
TDTIAWTTLPRPLFRKFFRQDLMVAALFRNFLLAQRIMPVYGCTPMSYPELPDTRRHPLW
ESWDLAVDMALAQLPMLEKRETEGIPYEYQPSTFFTEQLTAFEIYLTRGDAASQKPPEQL
PVVLQVLLSQQHRLRALILLGRFLDLGPWAVQLALSIGIFPYVLKLLQSAAQELKPIMVF
IWTRVLAVDISCQQDLIKDNGYTYFASIMKPQEIFPVVAPWVLDEHKAMCAFILAMLCKG
FKPGQIVCNSTDIMTYCLHHIEHPENPLLRQWSALCISQLWSELPDAKWRGIRENAHHKL
AYLIKDPCPEVRAAVAHAMTTFLGIPDLTDEVARIEESIAWATLELATDGSPIVRKELLV
FLSHFALRYENKFLVAAYEHLLEEREYELFPPPEDGLDHKMGLHYARSENREKDGTIKPS
VFGVAHDSVFAACWKRINIMSVDPHPEVQRDATVILDYVHHALLHSPVGAQAQSLMDEIL
RRSRKVSRGDMSQRTSVAGTRTAAAQPMPSPGLLKRTASYLFGPLLGTLDPSSAAPSPPL
TPSGSQRTLSQRSRKLPGLENAPPEQHDQSAPPSDYHVANEPSCPGYKERNPKEVPTLPL
VSTFLDYSTEYFREPQMKAPEAEEPGSDEYNKRLWRRSRNEAVLRETQPQKAYSRMHKWN
VPAGVIVTGSQPAKMTFHQFENHMAVADDGNTVTVWDWKTNTRLSRFSNGNPEGSKISDM
RFINEDDQALLMTGSSDGVIRIYHRYDSGLDVELASSWRALTHMVPSNVNSGMVFEWQQV
NGQVLVAGDERVIRIWNAGQEMCTHEIPARSGSCVTSLTSDQLTGNIFVAGFGDGAVRVF
DTRVRPQESMVRKWKDESRQWVRSVHMQRGGQRELLSASRNGRVHLWDIRMDQPLKTFQT
TRDVLRTASTHEHLPVFAVGTSAHLVKVFDFDGHEITRLEPYSGFSLQGKATTPLASTAF
HPHRMLLGCAARGDHQVSLFTCGNERVGS
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaatttctctcgacgtgccgccgtcttcccagtccggccgacaccaggtctcg
gctcagttcgcccggaacgccgctctcgccggcccatccatcgccgcttctcctctgcgc
catcccggctccttcgcccgccaaacgacccacgccgtatcgcatctccaggcgcagtac
gccgaggtgtcgggggccgcggcagcccaaacgcatgggtttgctaccgcgcaaccaacg
tggaacccgccgctgcaccaacaatggccccagcgacaagaacagaaccgcgaggccaac
cagcaaagctcactacctcacgcccctccggcacggcgtccgtcgagcgcccccgacccc
gaacgaaccgccgccgcggcgagtcagtccgttggtgaggagacggatgaggacggtctt
gccatcgtcgccgcgcccaaaaggccgcccttgacgcggccgaggagcgaacggggagca
cgcaatgccgacgaagactacgacatgggtgcccgccatggctttgacgaccactacctg
tccgaggacgtcatcgcccacctggcgaataactggtacatgtactttaccgacaagcgc
cacgaaacctccggaaagcccaagacgcccgccttcgagctccaggactggcgcatgcgc
gaccggctcaagaccgtctcggctgccatcgccgtgtgcctcaacataggcgttgagcca
ccggaccagctgcgcacgacccccggagccaagctcgaggcatggcaagatccgaacgtg
ccccccgttggcaaggccctcgagaacatcggcaaggcgctcgaggctcagtatgtgacg
ctcgctctgcgtacacgttacaagcagtacctggacccgtccatcgaagagaccaaaaag
ttttgcgtttccctgcgccgaaatgcaaaggacgagcgcgtgctcttccactacaatggc
cacggcgtccccaagccgacggcgtcgggcgagatctgggtgttcaacaaaaactacacg
caatacatccccgtgtcgctgtacgacctgcaacagtggctccaggcgcccaccatcttc
gtctgggactgctccgaggctggaaacatcctcaagaactacggcaagttcgtcgagaag
catgagatcgaagaggaggagcaggccgcccaggatcccaatcacgaaaaggtcaacttt
cggccctacattcatctggccgcctgcgactccaagcagaacctcccgacgaacccccaa
ctcccggccgatctcttcacctgctgcctgaccaccccgatcgagatggccctctggttc
tttgtcctgcagaatcctctgcattcagacatcacccccgagagggcgaggaagctcccc
ggccgccttcaggagcggcgcacccccctgggagagctgaactggatctttaccgccatc
accgacaccatcgcctggaccacgctcccgaggccgctcttccggaagttcttccggcag
gacttgatggtggcggctttgtttcgcaatttcctccttgctcaacgcatcatgcccgtc
tacggatgcacgcccatgtcataccccgagctgcccgacacccggcggcatcccctttgg
gagagctgggatcttgccgtcgacatggccctggcccagctccccatgctcgagaagcgg
gagaccgaaggcatcccctacgaataccaaccctccaccttcttcacggagcagctcacg
gcctttgagatctacctcaccaggggtgacgccgcctcgcaaaagcctcctgagcagctc
cctgtggttcttcaagtgctcctgagccagcagcaccggctccgggctctcatcctcctg
ggcaggttcctggatctcggcccgtgggccgtgcagctggccctcagcatcggcatcttc
ccttatgtgttgaagctgctgcagtccgccgcccaggagctgaagcccatcatggtcttc
atctggacgcgcgtgctggccgtcgacatctcgtgccagcaggacctgatcaaggacaac
ggctacacatacttcgcttccatcatgaagccgcaggagatcttcccggtcgtcgccccc
tgggtcctcgacgagcacaaggccatgtgcgccttcatcctggccatgctgtgcaagggc
ttcaagcccggccagatcgtctgcaactcgacggacatcatgacgtactgcctgcaccac
atcgagcatcccgagaaccccctgctgcgccagtggtcggccctctgcatcagccagctg
tggagcgagctcccggacgccaagtggagaggcatccgcgagaatgcccaccacaagctg
gcctacctcatcaaggatccctgccccgaggtgcgcgcggccgtggcccatgccatgacc
acgttcctcggcattcccgacctcacggacgaggtggcccggatcgaagagagcatcgcc
tgggccacgctggagctggccacggacggcagcccgatcgtgcgcaaggagctcctggtc
ttcctctctcactttgccctgcgctacgagaacaagttcctcgtggccgcctacgagcac
ctcctggaggagagggaatacgagctgttccctccccccgaagacggcctggaccacaag
atggggctgcactacgcgaggagcgagaaccgcgagaaggacggcaccatcaagccgtcg
gtgtttggcgtggcgcacgactcggtgttcgcggcgtgctggaagcgcatcaacatcatg
agcgtcgatccgcacccggaggtccagcgggacgcgaccgtcatcctcgactacgtccac
cacgcgcttctgcactcccccgtcggcgcccaggcgcagtcgctcatggacgagatcctg
cgacgctccagaaaggtgtcgcggggcgacatgagccagcgcacgagcgttgccggcacc
cgcacggccgccgcgcagcccatgccatcgcccggcctgctgaagcgcacggccagctac
ctctttggcccgctgctcgggacgctggatccttcgtcggccgcgccgtctcccccgctg
acgccgagcgggtcgcagaggacgctttcgcagcggagccggaagctgccgggcctagag
aacgcgccgccggagcagcacgaccagagcgcgccgccgtccgattatcacgtcgccaac
gagccttcgtgcccgggctacaaggagcggaatcccaaggaggtgccgacgctgcctttg
gtcagcaccttcttggactactcgaccgagtacttccgcgagccccagatgaaggcgccc
gaggccgaggagcccggcagcgacgagtacaacaagcgcttgtggcggcggtcgcgcaac
gaggccgtcctccgggagacgcagccgcaaaaggcgtactcgcgcatgcacaagtggaac
gtgcccgcgggggtcatcgtcacgggctcccagccggccaagatgacgtttcaccagttc
gagaaccacatggccgtcgccgacgacggcaacacggtcacggtctgggactggaagacc
aacacgcgcctgagccgcttctccaacggcaacccggaggggtccaagatctcggacatg
cgcttcatcaacgaggacgaccaggcgctgctcatgacggggtcctcggacggcgtgatc
cgcatctaccaccgctacgacagcggcttggacgtggagctcgcctcgtcctggcgcgcc
ctgacgcacatggtgccgagcaacgtcaactcgggcatggtgtttgagtggcagcaggtc
aacggccaggtgctcgtggcgggcgacgagcgcgtcatccgcatctggaacgcggggcag
gagatgtgcacgcacgagatccccgcgcgctccgggtcgtgcgtcacgtcgctgacgtcg
gaccagctgacgggcaacatcttcgtggccgggttcggcgacggcgccgtgcgcgtcttt
gacacgcgcgtccggccgcaggagagcatggtgcgcaagtggaaggacgagtcgcgccag
tgggtgcgttcggtgcacatgcagcgcggcggccagcgcgagctcctgagcgcgagccgc
aacggccgcgtccacctctgggacattcgcatggaccagccgctcaagacgttccagacg
acgagagacgtgctgaggacggcgagcacgcatgagcatttgcccgtgtttgcggtcggc
acctcggcccatctggtcaaggtctttgactttgacggccacgaaatcacccgcctcgag
ccgtactcgggcttctcccttcagggcaaggccaccaccccgctggcctcgaccgcgttc
cacccgcaccgtatgctcctgggatgtgccgcgcggggcgaccaccaggtgagcctattt
acgtgcggcaacgagagggtcggctcgtaa
DBGET
integrated database retrieval system
