Remersonia thermophila: 98125007
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Entry
98125007 CDS
T10833
Symbol
VTJ83DRAFT_3930
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98125007 (VTJ83DRAFT_3930)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
98125007 (VTJ83DRAFT_3930)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
NBCH_WD40
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_LRRK2
Beta-prop_IFT140_1st
Beta-prop_Vps41
CNH
Motif
Other DBs
NCBI-GeneID:
98125007
NCBI-ProteinID:
XP_070867808
JGI:
Remth1_3930
LinkDB
All DBs
Position
3:join(3881319..3881654,3881740..3882741)
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AA seq
445 aa
AA seq
DB search
MLSEEFMSAICGPPLSSNTAIAKDVGIYCHSLSPAYSVKSTFKKSSAPPSCLAVSEAHVF
AAQQDKAYVHVYSRLRGNQEAFVAFPERIRCVALVEDVLVLGTVEGRLMLWETCTGRLLS
TPARHVQAVSCVAATPYHILTGSDDSDIHVWSLPQLLELDTPAGAEFEPQRSLSNHRAAI
TGLAVSPSVSSDTSFCVSASKDKSCIIWNYQTGDALRTLLFPSAPLCVSLEPAARAFCVS
CEDGSLQLAELYGPKPLLGPGSEDPATAVQAPSVPFGSAHADAGPATCVAWSYDGTMLLT
GHPRGQILRWDVAENKSPVELANLNAAVTNVVFVSPFPERKPTKTVNIVKPSQAERSYTF
AAQFEQLPEATAGSATFDSLLATPGFPQDTMEAAIAAFYQPVGGGDSAGDAELQRQNEEL
WELINEQRALQKETLQRYVQAKSSQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgaggagttcatgtcggccatctgtgggccacccctcagttccaacacggcg
atcgccaaagatgtgggcatctactgccacagcctcagtcccgcttactcagtcaagtcg
accttcaagaagagctcggccccgcccagctgcctggcggtgagcgaggcccacgtcttt
gctgcccagcaggacaaagcctacgtgcacgtctattccaggctgcgcgggaaccaggag
gcgtttgtggcgttcccggagaggatacgctgcgtggcgctcgtcgaggatgtcctcgtc
ttgggcacggtcgagggccggctgatgctatgggagacatgcacaggccgcctcctatcg
accccggctcgccacgtccaggccgtgtcatgcgtcgctgccacgccgtaccacatcctc
acggggtcggacgactcagacatccacgtgtggtccctgccccagctgctcgagctggac
acgccggccggcgccgagttcgagccgcagcggagcctctctaaccatcgcgccgccatc
accggcctcgccgtcagccccagcgtcagcagcgacaccagcttttgcgtgtccgccagc
aaggacaagtcgtgcatcatctggaactatcagaccggcgacgccctgcgcaccctgctc
ttcccgagcgctccgttatgcgtctccctcgagccggccgcccgggccttttgcgtctca
tgcgaggacggctcgctgcagctggcggagctgtacgggcccaagcccctgctgggcccc
gggtccgaagaccccgcgacggcggtgcaggcgccgtcggtgccgtttggctccgcccat
gccgacgccggcccggcgacgtgcgtcgcctggagctacgacggtacgatgctcctgacg
ggccacccccggggccagatcctgcggtgggacgttgccgagaacaagtctcctgtcgag
ctggccaacctgaacgccgccgtcaccaacgtcgtctttgtctcgcccttccccgagagg
aagcctaccaagacggtcaacattgtcaagccgtcgcaagccgagcgctcgtacacgttt
gccgcgcagtttgagcagctgcccgaggcgacggccggctcggccacgttcgactcgctg
ctggctacgcctgggtttccgcaggacaccatggaggcggccatcgctgcgttctaccag
cccgtgggcggcggcgattcggccggagatgcggagctgcagaggcagaacgaggagctg
tgggagctcatcaatgagcagagggctctgcaaaaggaaacgctgcagcgttatgttcaa
gccaagtcgagccagtaa
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