Remersonia thermophila: 98125079
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Entry
98125079 CDS
T10833
Symbol
VTJ83DRAFT_3996
Name
(RefSeq) hypothetical protein
KO
K12840
splicing factor 45
Organism
rthe Remersonia thermophila
Pathway
rthe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98125079 (VTJ83DRAFT_3996)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rthe03041
]
98125079 (VTJ83DRAFT_3996)
Spliceosome [BR:
rthe03041
]
Complex A
U2 snRNP components
U2 related factors
98125079 (VTJ83DRAFT_3996)
Complex B
98125079 (VTJ83DRAFT_3996)
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GFIT
Motif
Pfam:
G-patch
New_glue
RRM_1
Motif
Other DBs
NCBI-GeneID:
98125079
NCBI-ProteinID:
XP_070867874
JGI:
Remth1_3996
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Position
3:complement(join(4087307..4087405,4087520..4089070))
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AA seq
549 aa
AA seq
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MASPPPPPQPPPARGAMSLYANLLEADSSASISRDPVLFKDNKDSASPDPKKPPVNPALR
FQPIRRPQAKAPAKPKPAFPKAPPAVPPSVSTTTTTTTTTTTTAAAATPAAPAPPRSTLA
DWAATEDDEYFYGYAGEKRQRGGRRKKKKKQLDEVRETDWDELYDPSRPTNVEEYLRSEE
RVREVREWKAILYAHRRRRDSDEDRSEGDEDGGARDERFAPPPSLTFAPPPASPPRASAS
VVAAAVMADATGDDAYARRLALSGMAPPPPPPPPPPPPPPPSGPSPPTDSDTISRAPVRY
SPPGDAMDLDDKEDDYDPEVDYSAIPLPPPTTAPTADADADQQPGPRPAQKGKAFAQRLM
AKYGWTRGSGLGAHGSGITTALRVQVERRRRRPDAEGGGFAEPGGRGRIIAPKMPKAKPS
QQQQQQEGEGGAEGGSAAGGGGGGGGGDGKFGRMSVVVVLDRMLDNMPDVEAEVEVGLGQ
EIGEECGERYGRVERIVVDVEGRRVFIKFVEVVSALRAVNALEGRIFNGNAIVARFYDED
KFEEGVYDG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcctccacccccaccgcagcctcctccggctcgcggcgccatgtcgctgtac
gccaacctgctcgaggctgacagctccgcttccatctctcgagacccggtgctcttcaag
gacaacaaagacagcgcctctcccgaccccaagaaacctcccgtaaacccagccctccgt
ttccaaccgatccgccgtccgcaggccaaagccccggcaaagccaaaacctgccttcccc
aaggctcctcccgccgtccccccatccgtttctacgacgacgacgactaccaccaccacc
accactaccgccgccgccgcaacaccagcagcccccgccccaccgcggagcaccctcgcc
gactgggccgccaccgaggacgacgagtacttttacggctacgccggcgagaagcgccag
cgcggcggccgccgcaagaagaaaaagaagcagctcgacgaggtccgcgagaccgactgg
gacgagctgtacgacccgtcgcgccccaccaatgtcgaggagtacctgcgcagcgaggag
cgcgttcgcgaggtgcgcgagtggaaggccattctgtatgcccatcgccggaggagggat
agcgacgaggacaggagcgagggggacgaggacggcggagcccgcgacgagcgcttcgcg
ccccctccctcgctcacgtttgcgccgccgcccgcgtcgcccccccgcgcttccgcctcc
gtcgtggccgccgccgttatggccgatgcgaccggcgacgacgcatacgcccgccggctg
gcactctctggcatggcgccgccaccgccgccgccgccacctccaccaccacctcctcct
ccttcaggaccctcccctccaaccgactccgacaccatctcccgcgcccccgttcgctac
tccccgccgggcgacgccatggacctcgacgacaaggaagacgactacgacccggaggtg
gactactcggccatccctctccccccgccgacgacagcgcccaccgccgacgccgacgcc
gaccagcagccgggcccccgccccgcgcagaaaggcaaggcctttgcccagcgcctcatg
gccaagtacggctggacgcggggcagcggcctgggcgctcacgggtccggcatcaccacc
gccctccgcgtgcaggtggagcggcggaggcggaggcccgacgccgaagggggcgggttt
gccgagcccggtgggagggggaggatcatcgcacccaagatgcccaaggcgaaaccctcg
cagcagcaacagcagcaggagggggagggcggtgccgagggggggtcggcggcaggagga
ggaggaggaggaggaggaggagacggaaagttcggccgaatgtcggtcgtggtggtgctg
gatcgcatgctggacaacatgccggacgtggaggccgaggtggaggtcgggttggggcag
gagattggcgaggaatgcggcgagagatacgggagggtggagaggatcgtggtggatgtg
gaggggagaagggtatttatcaagtttgtcgaggtcgtttcggccttgagggccgtcaac
gccctcgagggacgtatctttaacggcaacgccatcgtcgcacgcttctacgacgaggac
aagtttgaggagggcgtctacgatggctga
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