Remersonia thermophila: 98125099
Help
Entry
98125099 CDS
T10833
Symbol
VTJ83DRAFT_4012
Name
(RefSeq) hypothetical protein
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
rthe Remersonia thermophila
Pathway
rthe04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
98125099 (VTJ83DRAFT_4012)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rthe01002
]
98125099 (VTJ83DRAFT_4012)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rthe04121
]
98125099 (VTJ83DRAFT_4012)
Enzymes [BR:
rthe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
98125099 (VTJ83DRAFT_4012)
Peptidases and inhibitors [BR:
rthe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
98125099 (VTJ83DRAFT_4012)
Ubiquitin system [BR:
rthe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
98125099 (VTJ83DRAFT_4012)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
98125099
NCBI-ProteinID:
XP_070867890
JGI:
Remth1_4012
LinkDB
All DBs
Position
3:complement(join(4122056..4123108,4123168..4123330,4123382..4123488,4123565..4124404,4124462..4124743,4124905..4125234))
Genome browser
AA seq
924 aa
AA seq
DB search
MMNNRGHLPAGQQVQAVADMGPAPSGGPPPRRGGRPQHYQPTHSYHHHGHHHQHVAAQPM
YPANYMANPYAAGHYYVPPPYQNGAIPAPAAYMPYHSAPYVRSPPAMPHFPQVHDVAVAA
TQAPVHPVAAPVAAPVAAPVAAPAPAPASQPPQQPEPQQPEAQAAPQPASPPEVSRPEPS
PKPQAKPSSVVSSSEPKRPPFRPPLPWLSNPGVPFPQRTSKLRRKKKALGANAERLELPG
QHAPGAETADKAQGKGLAEKEPSPAVEQPAADPKPEELKAAATPSRSETPSTQDPPTEGT
NVSSIPTTPSSSVQPSKAASAPSAPKTVAPAILAVPVVPALPKASAKPAASAEKTLPDAK
PAAAAPSEPQAEPAQPAPVEPEAEEAPKPALAPAAAPAKPKLWTGLFSKSAASASSSSTG
ASAQASTNGHADGSGVLGAGAFTKMNATSLAQALQAYRAASPDKLAFLEPRGLVNTGNMC
YMNSVLQALLFCVPFYDFLDQVGKKAAHSFKSETPLVDAMVMFMREFKLLETAASAEQLQ
KRIKPEVYEKYGEPFTPEFVYDAIRTLPRFASMRRGHQQDAQEFLGFLLEGLHDECARVI
GQAPASTASTAPSSSLPSPTVANAGEGADDWLEVGRRQRPAVTRSSGHSHTQTPITKIFG
GQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEVRNIVDALRGLTRPEVIHGDFNSPHGKD
VRATKQVFIESVPPVLILHLKRFQFDAEGHGTVKIWKKVGYPLEFEFPREVLSRQTRNTM
LSENSGAPRYRLIAVVYHHGKNASGGHYTADVRRQDGREWIRIDDTVIRRVRDEDVAEAG
AEEDAGKADARKDLSGAASGNRFLGMNNEDAGDDDGWKQAAGGKKWSSVVNGAALTNGHK
PKPQLRGDSIKDNKVAYLLFYQRI
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatcgtgggcatctgccggctgggcagcaggtgcaggcagtggccgacatg
ggcccggcgccctcgggcggcccgccgcctcgccgcggcggccgtccccagcattaccag
cccacccacagctatcatcatcacggccaccaccaccagcatgtcgctgcccagcccatg
tatcccgccaactacatggccaacccctacgccgccggccactactacgtcccgcccccc
taccagaacggcgccatccccgccccggccgcctacatgccctatcacagcgccccgtat
gtccgctcgcctcccgccatgccgcacttcccgcaggtccatgacgttgccgtcgccgct
acccaggctcccgtccacccggtagccgccccggtagccgccccggtagccgccccggta
gccgccccggcccccgcgcccgcctcccagccgccgcagcaaccagagcctcagcagccc
gaggcgcaggcagccccgcagcctgcctcgccccccgaggtttctcgccccgaaccctct
cccaagcctcaggccaagccgtcgtccgttgtctcctcctccgagcctaagcggccgcct
ttccgccctccgcttccctggctctccaaccccggcgtgcccttcccacagcgcacctcg
aagcttcggaggaaaaagaaggccctgggtgccaacgccgaacggctggagctgccgggc
cagcacgctcccggcgcggagaccgctgacaaggcacaggggaaggggctggccgagaaa
gagccgtcgcccgccgttgaacagcccgccgccgaccccaagccggaggagctcaaggcg
gctgccacgccttcccgctccgaaacgccgtccacccaggatccgccaaccgaaggtacc
aacgtctcgagcatcccgaccacgccgagcagttcggtccagccatccaaggcggcgagc
gctccgtctgcgcccaagacggtcgccccggccattcttgcagttccggtggtccctgcc
ctgcccaaggccagcgccaagccggcggcgagcgccgagaagacgttgcccgacgccaag
cctgccgcggccgcccccagcgagccgcaggccgagcccgcccaaccggcacccgtcgaa
cctgaagcggaggaggccccgaagccggccctcgcccccgctgccgccccggccaagccc
aagctctggaccgggctcttttccaagtcggccgcctcagccagctccagctcgacgggt
gcctctgcccaggcttcgaccaatggccatgcggacggctccggcgtgctcggggctggg
gccttcaccaagatgaatgcgacgtcccttgcccaggccctgcaggcctaccgcgccgcg
tcgcccgacaagctggcctttttggagcctagaggtctggtgaataccggtaacatgtgc
tacatgaactctgtgttgcaagctctcctcttctgcgttcctttctacgacttcttggat
caggttggcaagaaggctgctcacagcttcaagagcgaaacgcccctggtggatgccatg
gtcatgttcatgcgcgagttcaagctgctcgaaaccgccgcctcggccgaacagctccag
aagcgcatcaagcccgaggtgtacgagaagtacggcgaacctttcaccccggagttcgtc
tacgatgccatccggacgttgcctcgttttgccagcatgaggcgtggacaccagcaggat
gctcaggagttcctcggcttcctcctggagggtcttcacgacgagtgcgcccgcgtcatt
ggccaggcgcccgcttcgaccgcctcgacggctcccagctcgtcgctcccgtccccgacc
gttgccaacgccggcgaaggcgccgacgattggctcgaggtcggccgccgacagcgcccg
gccgtcacgaggtcttccggacactcgcacacccagactcccatcaccaagatctttggc
gggcagctccggtcggaactgcgcgtcccgggcaacaagaactctgtgacgctcgagcct
taccagccgctgcagctcgacatcgggtcgcccgaggtgcgcaacatcgtcgacgcgctc
aggggcctgacccgtcccgaggtcatccacggcgacttcaattcgccgcacggcaaggac
gtccgggcgacgaagcaggtcttcatcgagtccgtgccgccggtcctgatcctgcacctg
aagcgcttccagttcgacgccgagggccacggcaccgtcaagatctggaagaaggttggc
tatccgctcgagtttgagttcccgcgcgaggtcttgtcccgccagacccgcaacacgatg
ctgtccgagaactcgggcgctccgcggtaccggctcatcgccgtcgtctaccatcacggc
aagaacgccagcggcggccactacacggcggatgtgcggcgccaggacggccgtgagtgg
atccgcatcgacgacacggtcatccggcgcgtgcgcgacgaggatgtggccgaggccggc
gccgaggaagacgctggcaaggcggacgcccgtaaagacctgtcaggcgccgcctcgggc
aaccgcttcctgggcatgaacaacgaggatgccggcgatgacgacggctggaagcaggcg
gccggcggcaagaagtggagcagcgtcgtcaacggagcggctctgaccaacggccacaag
cccaagccgcagctcaggggagacagcatcaaggacaacaaggtcgcctacctgctgttc
taccaacgcatctga
DBGET
integrated database retrieval system
