Remersonia thermophila: 98125237
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Entry
98125237 CDS
T10833
Symbol
VTJ83DRAFT_4137
Name
(RefSeq) hypothetical protein
KO
K11825
AP-2 complex subunit beta-1
Organism
rthe Remersonia thermophila
Pathway
rthe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
98125237 (VTJ83DRAFT_4137)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98125237 (VTJ83DRAFT_4137)
Membrane trafficking [BR:
rthe04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
98125237 (VTJ83DRAFT_4137)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
PDS5
CLASP_N
HEAT_EF3_N
tRNA_int_end_N3
Motif
Other DBs
NCBI-GeneID:
98125237
NCBI-ProteinID:
XP_070865587
JGI:
Remth1_4137
LinkDB
All DBs
Position
4:complement(join(78116..79900,79963..80038,80106..80290,80690..80734))
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AA seq
696 aa
AA seq
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MSAVQSGGDSKLFARGKVAELRFELNNGGKKDKYHTAKRIALKKIVANMTMSNNDMVALF
PDVVACMNIQNLEIKKMCFLYLVNYARMRPDVAVKAIPFLQHDCEDANPLIRALALRTIS
YIHVREFVDATVPIVRHLLRDVDPYVRKTAAYCVAKLYDHDRHMVEKSDFIDRLNGLLRD
DNPTVVASALASLMDIWERSDAIKLTIDYSNASKMVAILPDCSEWGQTYILEALMMYVPQ
DSGEAALLAERIAPRLSHSNSAVVLTCIRVILYLMNYISDRKQISALCRKLSPPLVTLLA
KGPEVQYLALRNALLILQRRPDVLRNDIRVFFCKYNDPIYVKVTKLELIFMLANEKNIDE
VLTELREYATEIDVHFVRKAVRAIGKLAIKIEPAARRCINLLLELVATKVTYIVQEATVV
IRNIFRKYPNQYEGIIGTLCEHLDSLDEPEAKAAMVWVIGQYASRIENSDALLEDFLFSF
AEEPVEVQLALLTATVKLFIQRPTKGQDLVPKVLKWATEETDNPDLRDRAYMYWRLLSTD
MEAAKRIVMGEKPAITAESERLDPATLEEMCLNVGTLATVYLKPVQTVFRNARPRRLQES
PCLQRQDDDVLFGHVGVPTQALALQQKAQNGNIDKAVSEADAYFASQIQAVRAQEHGDSF
GGSGGENQGGYVVNQYAPQTVYQPAQGVAGNGDLLL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgttcaatcagggggggactcgaagctgtttgctcggggcaaagtcgccgag
ctgcgcttcgagctcaacaacggcggcaagaaggacaagtatcacacggcaaagcggatc
gccctcaagaaaatcgtcgccaacatgaccatgagcaacaacgacatggttgccctgttt
cccgacgtcgtcgcctgcatgaatatccagaacctcgagatcaagaagatgtgctttctc
tacctggtcaactacgcgaggatgcgccccgacgtggcagtaaaagccatcccgttcctg
caacatgactgcgaagacgccaacccgctcatccgggccttggcgctcaggaccatctcg
tacatccatgtgcgcgagttcgtcgacgcgacggtacctatcgtccgacatctcctccgc
gacgtggatccatacgtccgcaagacggcggcatactgcgtcgccaagctgtacgaccac
gaccggcacatggtggagaagtccgactttatagacaggcttaacgggctgctgcgggac
gacaacccaaccgtcgtggccagcgctctggctagcctcatggacatttgggagcggagc
gacgccatcaagctcaccatcgattacagcaacgcctccaagatggtcgccatcttgcca
gactgctccgagtggggccagacgtacatcctcgaggccctcatgatgtacgtgccgcag
gattccggagaggcggcgctcctcgccgagcgcatagcgccgcgtctttcgcactccaac
tcggccgtcgtgctcacgtgcatacgcgtgatcctctacctcatgaactacatctcggac
cggaagcagatctcggccctgtgccggaagctctcgccacccctagtgacgttgcttgcc
aaaggccccgaggtccagtatctcgcgctccgtaacgcccttctcattcttcaaagacgg
cccgacgtgttgcgcaacgacatccgcgtcttcttctgcaaatacaacgaccccatctac
gtcaaggtcaccaagctcgagctcatctttatgctcgccaacgagaagaacattgacgag
gttctgaccgagctgcgcgaatacgcgaccgagatcgacgtgcattttgtgcgcaaggcg
gtgcgcgccattggcaagctggccatcaagatcgagccggcggcacgtcggtgcatcaat
ctgttgctcgagctcgttgccaccaaggtgacgtacatcgttcaggaggcaacggtcgtg
atccggaacatctttcgcaagtatcccaaccagtacgagggcatcatcgggaccctttgc
gagcacctcgactcgctggatgagcccgaggccaaagcagccatggtgtgggtcattggc
caatacgccagccgcatcgagaactcggacgctctgctcgaagacttcctcttctccttc
gccgaagagcctgtcgaggtacagctcgccctgctgaccgccacggtcaagctgttcatc
cagcgccccaccaagggccaggaccttgtgcccaaggtgctcaagtgggccaccgaggag
acggacaatccggacctgcgcgaccgcgcctacatgtactggcgcctgctgtcgacagac
atggaagccgctaagcgcatcgtcatgggcgagaagcccgccatcacggccgaatcggag
cgcctcgacccggccaccctcgaggagatgtgcctcaacgtcggcaccctggccaccgtc
tacctcaagcccgtccagaccgtcttccggaacgcccgtccccgccggctgcaggagtca
ccctgtctacagcgccaggacgacgatgtgctgttcgggcatgtcggcgtgcctacccag
gcgctggcgctgcagcaaaaggcgcaaaatggaaacatcgacaaggcggtcagcgaggcc
gacgcctactttgcgtcgcagatacaagccgtgcgcgctcaggagcacggcgacagcttc
ggaggcagcggcggcgaaaaccaaggcggttacgtcgtgaaccagtatgcgccacagacg
gtctatcaaccggcgcagggagtcgcagggaacggcgatttgttgttgtag
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