Remersonia thermophila: 98125307
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Entry
98125307 CDS
T10833
Symbol
VTJ83DRAFT_420
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
rthe Remersonia thermophila
Pathway
rthe03040
Spliceosome
rthe04141
Protein processing in endoplasmic reticulum
rthe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
98125307 (VTJ83DRAFT_420)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
98125307 (VTJ83DRAFT_420)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
98125307 (VTJ83DRAFT_420)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rthe01009
]
98125307 (VTJ83DRAFT_420)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rthe03041
]
98125307 (VTJ83DRAFT_420)
03009 Ribosome biogenesis [BR:
rthe03009
]
98125307 (VTJ83DRAFT_420)
03110 Chaperones and folding catalysts [BR:
rthe03110
]
98125307 (VTJ83DRAFT_420)
04131 Membrane trafficking [BR:
rthe04131
]
98125307 (VTJ83DRAFT_420)
03051 Proteasome [BR:
rthe03051
]
98125307 (VTJ83DRAFT_420)
03029 Mitochondrial biogenesis [BR:
rthe03029
]
98125307 (VTJ83DRAFT_420)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rthe04147
]
98125307 (VTJ83DRAFT_420)
Protein phosphatases and associated proteins [BR:
rthe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
98125307 (VTJ83DRAFT_420)
Spliceosome [BR:
rthe03041
]
Complex B
Other components
Prp19 complex
98125307 (VTJ83DRAFT_420)
Complex C
Prp19-CDC5 complex
98125307 (VTJ83DRAFT_420)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
98125307 (VTJ83DRAFT_420)
Chaperones and folding catalysts [BR:
rthe03110
]
Heat shock proteins
HSP70 / DNAK
98125307 (VTJ83DRAFT_420)
Membrane trafficking [BR:
rthe04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
98125307 (VTJ83DRAFT_420)
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
98125307 (VTJ83DRAFT_420)
Proteasome [BR:
rthe03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
98125307 (VTJ83DRAFT_420)
Mitochondrial biogenesis [BR:
rthe03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
98125307 (VTJ83DRAFT_420)
Exosome [BR:
rthe04147
]
Exosomal proteins
Proteins found in most exosomes
98125307 (VTJ83DRAFT_420)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
ParM_N
DDR
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
98125307
NCBI-ProteinID:
XP_070869773
JGI:
Remth1_420
LinkDB
All DBs
Position
1:complement(join(1476129..1476397,1476457..1477266,1477341..1477888,1477952..1478071,1478133..1478187,1478248..1478290))
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AA seq
614 aa
AA seq
DB search
MADEVYDGAVGIDLGTTYSCVAVYETNVEIIANEQGSFTTPSFVSFTEDERLIGEAAKNQ
AAMNPTNTVFDVKRLIGRRFDDPTVKKDTETWPFKVVDDGAGNPKVEVQYLGATHTFSPQ
EISAMVLTKMKEIAETKLGKKVEKAVITVPAYFNDNQRQSTKDAGAIAGLNVLRIINEPT
AAAIAYGLGAGKSDKERNVLIYDLGGGTFDVSLLHIQGGVFTVKATAGDTHLGGQDFDTN
LLDYCKKEFTRKTKKDLSGDARALRRLRTACERAKRTLSSGAQTTIEIDSLFDGEDFNMQ
ITRARFEDLNAKAFQGTLEPVSQVLKDAGLEKSQVDEIVLVGGSTRIPRIQKLLSEYFDG
KKLEKSINPDEAVAYGAAVQAGILSGKATSADTADLLLLDVVPLSLGVAMEGNIFAPVVP
RGQTVPTIKKRTFTTVADNQQTVQFPVYQGERVNCEDNTSLGEFTLAPIPPMKAGEPVLE
VVFEVDVNGILKVTATEKTSGRSANITISNSVGKLSSDEIQNMISEAEKFKSKDEAFSKR
FEAKQQLESYIARVEEIISDPTLSLKLKRGQKEKIEQTLSEALGQLELEDSSADDLKKKE
LALKRLVTKAMASR
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagtttatgacggtgccgtcggcatcgatctgggcaccacctactcctgc
gtggctgtctatgagaccaacgtcgagatcatcgcaaatgagcagggcagcttcacgacg
ccctcgttcgtctccttcaccgaggacgagcgcctgatcggtgaggcggccaagaaccag
gccgctatgaaccccaccaacaccgtcttcgatgtcaagcgtcttatcggtcgccgcttc
gatgaccccaccgtcaagaaggacacggagacgtggccgttcaaggtcgtcgacgacggc
gcgggcaaccccaaggttgaggtccagtatcttggtgccacccacaccttctctcctcag
gagatctccgccatggtcctcaccaagatgaaggagatcgccgagaccaagctcggcaag
aaggtcgagaaggccgtcattaccgtcccggcctacttcaacgacaaccagcgccagtcc
accaaggatgccggtgccatcgctggcctgaacgtcctgcgtatcatcaacgagcccacc
gctgccgctatcgcctacggtcttggcgcgggcaagtccgacaaggagcgcaacgtcctc
atctacgatcttggtggcggtactttcgatgtgtctctcctccacatccagggcggtgtc
ttcaccgtcaaggctaccgctggtgacacccaccttggtggccaggacttcgataccaac
ctcctcgactactgcaagaaggagttcactcgcaagacgaagaaggatctctccggcgat
gcccgtgcccttcgtcgcctgcggaccgcttgcgagcgcgccaagcgcactctgtcgagc
ggtgctcagaccaccatcgagatcgactctctcttcgatggcgaggacttcaacatgcag
atcactcgtgcccgtttcgaggatctgaacgccaaggccttccagggcaccctggagcct
gtctcccaggtcctcaaggacgccggcctcgagaagagccaggtcgacgagatcgtgctc
gtcggtggctcgactcgtatcccccgcatccagaagctcctgagcgagtacttcgacggc
aagaagctcgagaagagcatcaaccccgacgaggccgttgcctacggcgccgccgtccag
gccggtatcctctccggcaaggccacctcggccgacaccgctgacctcctcctgcttgac
gtggtccctctctccctgggtgtcgccatggagggcaacatcttcgcccccgtcgttccc
cgcggccagacggtcccgaccatcaagaagaggaccttcaccaccgtcgccgacaaccag
cagaccgtccagttccctgtgtaccagggcgagcgtgtcaactgcgaggacaacacctcc
ctgggcgagttcactcttgctcctatccctcccatgaaggctggcgagcccgtcctcgag
gtcgtcttcgaggtggacgtcaacggtatcctcaaggtcactgccaccgagaagacctcg
ggccgcagcgccaacatcaccatctccaactcggtcggcaagctctcgtcggatgagatc
cagaacatgatcagcgaggctgagaagttcaagagcaaggacgaggccttcagcaagcgc
ttcgaggccaagcagcagctcgagtcgtacattgctcgtgtcgaggagatcatctcggac
ccgaccctgtcgctcaagctcaagcgcggccagaaggagaagatcgagcagaccctcagc
gaggctcttggccagctcgagctcgaggactcgagcgccgatgacctcaagaagaaggag
ctcgccctcaagaggctggtcaccaaggccatggcctcgcggtaa
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integrated database retrieval system
