KEGG   Remersonia thermophila: 98125323
Entry
98125323          CDS       T10833                                 
Symbol
VTJ83DRAFT_4214
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
rthe  Remersonia thermophila
Pathway
rthe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    98125323 (VTJ83DRAFT_4214)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rthe03041]
    98125323 (VTJ83DRAFT_4214)
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98125323 (VTJ83DRAFT_4214)
Spliceosome [BR:rthe03041]
 Complex B
  Other components
   Prp19 complex
    98125323 (VTJ83DRAFT_4214)
 Complex C
   Prp19-CDC5 complex
    98125323 (VTJ83DRAFT_4214)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    98125323 (VTJ83DRAFT_4214)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C TPR_HPS5_insect PP1_bind
Other DBs
NCBI-GeneID: 98125323
NCBI-ProteinID: XP_070865664
JGI: Remth1_4214
LinkDB
Position
4:join(338387..340369,340433..340750)
AA seq 766 aa
MPVVKGGVWTNIEDEILKASVSKYGLNQWARVSSLLARKTPKQCKARWNEWLDPSIKKIE
WSKEEDEKLLHLAKLMPTQWRTIAPIVGRTANQCLERYQRLLDEAEQREASALGLTGPDG
GETRAPTADDVRRLRPGELDPDPETKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKR
KARERQQEESRRLAALQKRRELKTAGINIKITTRKKGQMDYNADIPFEKKPVPGFYDTTD
EIRRNEYQREHFDPKKQQVGNKRKGDEDDEADRKRRKNDKDGASASLKAALKAGQMQKLR
EAEQSQKRKPLVLPAPQVSEGELEEIVKMGEIANRVSKEAREADNDATRGLVGNYSALTT
GGPIRTPRAPPQEDRIANEIRNIRALTETQSSLLGGENTPLHQGPGSTGFESAAPRKEVI
ATPNPLATPLRAANGPAATPLRVGQTPLRTPRDTFSLNDPDADFDMVGGTPADARMREMS
LRHQLKQRLAALPKPKETEWELELPEEKAEPAAAEQLEEDAAERDRREREIREAREALER
SRRTQVMQRDLPRAASVDYTALLKQAADVADPARALIAREAALLIAHDAAQYPLPGAPPA
KPVPLPRIDDNALAEARLQVLMEMEKPSAEDVHAAWDKEDPVLLGLGRPDDPVPAMHAAL
ESTLESLLASAEKGNKLEKKLALHLGGYKNRAETLRTKIADAHVALEKARNALAGFRVLQ
RSEEQAIQRRLAALRAEVAFVSTREREAQEMYRRVKDELEELRIAG
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgcccgtcgtcaagggaggcgtgtggaccaacatcgaggatgaaatcctcaaggcgtcc
gtcagcaagtacgggctcaaccagtgggcgcgcgtgtcgtcgctcctggcccgcaaaacc
ccgaagcagtgcaaagcgcgatggaacgagtggctcgaccccagcatcaagaagatcgaa
tggagcaaggaggaggacgagaagctgctgcacctggccaagctgatgcccacgcaatgg
cggaccatcgccccgatcgtcggccgcaccgcgaaccagtgtctcgagcgctatcaacga
cttctcgatgaggcagagcaacgtgaagcctccgccctcggcctcaccggccccgacggc
ggcgagacgcgagccccgaccgccgacgacgtgcgccgcttgcgacccggcgagctcgat
cccgaccccgagaccaagcccgcccgccccgataccatcgacctcgacgaggacgagaag
gaaatgctcagcgaggcccgcgcccgtctcgccaacacgcagggcaagaaggccaagcgg
aaggcccgcgagcgccagcaggaggagtcgcgtcgtctcgctgctctgcaaaaacgccgc
gagctcaagacggccggcatcaacatcaagatcaccacccgcaagaagggccagatggac
tacaacgccgacatccccttcgagaagaaacccgtgcccggattctacgacacgaccgac
gaaatccgccgcaacgagtaccagcgcgagcacttcgatccgaagaagcagcaggtcggg
aacaagcgcaagggcgacgaggacgacgaggccgatcgcaagcgccgcaagaacgacaag
gatggcgcgtcggcctcgctgaaggccgccctcaaggcgggccagatgcagaagctgcgc
gaggccgagcagagccagaagcgcaagcccctggtgctgcccgccccccaggtcagcgag
ggcgagctcgaggagatcgtcaagatgggcgagattgccaaccgcgtcagcaaggaagcc
cgcgaggccgacaacgacgctacccgaggcctcgttggcaactactcggctctcacaaca
ggaggcccgatccgcaccccacgcgctcccccgcaagaggaccgcatcgccaacgagatc
cgcaacatccgcgccctcaccgagacgcagtcatcgctgctgggcggcgagaacacgccg
cttcaccaaggtccagggtccaccgggtttgagtcggcagctccgaggaaagaggtcatt
gcgacacccaacccgcttgccacgccgctccgggcagccaacggaccggccgcgacgccc
ctccgcgtcggccagaccccgttgcgcacccctcgtgacaccttttctctcaacgacccc
gacgccgacttcgacatggtcggcggaaccccggccgatgcgcgcatgcgtgaaatgtcg
ctccgccaccagctcaagcagcgcctcgccgccctgcccaagcccaaggagacggaatgg
gagcttgagctgcccgaggagaaggcggagcctgcggccgccgagcagctcgaggaagac
gctgccgagcgtgaccgtcgcgagcgggaaatccgcgaggcccgggaggccctcgagcgt
agtcgtcgcactcaggtcatgcagcgggatctcccgcgggccgcgagcgtcgattatacg
gcattgctgaagcaagctgccgacgtcgccgatccggcccgggctctcattgctcgcgaa
gccgccctgctgatcgcccacgacgctgcccagtacccgctgccgggggcgccgcccgcc
aagcccgtgccactgccgcggattgacgacaacgccctggccgaggcccgtctacaggtg
ctgatggagatggaaaagccatcggcagaggacgttcatgctgcctgggacaaggaggat
ccggttctgctcgggctgggccgtccagacgacccagttccggccatgcacgcagctctt
gagtctacgctcgagtccctcctcgcctcggccgaaaaaggcaacaagctcgaaaagaag
ctcgcgctgcacctcggcgggtacaagaaccgcgccgagacgctgcgcaccaagattgcc
gacgcgcacgtcgctctcgagaaggctcgcaacgcgctggccggattccgtgtccttcag
cggagcgaagaacaggccatccagcgccggctggccgcgctccgcgccgaggtcgcgttc
gtaagcacgcgtgagcgcgaggcgcaggagatgtatcggagggtgaaggacgagctggag
gagttgaggattgctgggtga

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