KEGG   Remersonia thermophila: 98125355
Entry
98125355          CDS       T10833                                 
Symbol
VTJ83DRAFT_4243
Name
(RefSeq) hypothetical protein
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
rthe  Remersonia thermophila
Pathway
rthe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    98125355 (VTJ83DRAFT_4243)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98125355 (VTJ83DRAFT_4243)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     98125355 (VTJ83DRAFT_4243)
SSDB
Motif
Pfam: Tyr-DNA_phospho PLDc_3
Other DBs
NCBI-GeneID: 98125355
NCBI-ProteinID: XP_070865693
JGI: Remth1_4243
LinkDB
Position
4:complement(join(458763..460112,460218..460619))
AA seq 583 aa
MDSKRPDPPEDRPTPASLSHPVSPPLKRRRLADPEPAPQQAPVVEGEKPAAAARFPSPFK
LTRIRDLPPALNRDCIALKDLLGDPLISECWQFNYLHDIDFLLAALDEDVRRLVKVHIVH
GFWKREDPSRLALQDAASRHANVTLHAAFMPEMFGTHHSKMMVLFRHDDTAQVVIHTANM
ILRDWTNMTQAAWVSPRMPLLPSAAGGREGSADAEMGSGERFKADLLRYLRSYDARRPTC
KALADRLVRYDFSAVRGALVASVPGRHHLEDAAGLFGWPALEQALRSVPVSPGPAEIAIQ
VSSIATLGPTDAWLRGTFFNALAKGRGPSGTAPNGSSTSPPPPPPQQQQPPQPQAQAQPK
PTLKVIFPTADEIRRSLDGYTSGGSIHTKISSPQQARQLAYLRPLFCHWANDSGLSDDGT
VAGGSASAGGVSHDAKELDAGRRRAAPHIKTYIRFAGQDNGGSGAPRTIDWALLTSANLS
KQAWGEAVTSAGEVRVASYEIGVLVWPGLYGEGATMRPTFQTDWPDEKAEDEHEADGGEN
KAAVVALRMPYSLPLRPYGKTEVPWVATMSHHEPDWMGQVWNV
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggactcgaaacgtccagacccgccggaggatcggccaacgccggcctcgctctcccac
cccgtcagtccgccgctcaaacgacggcgactcgccgatccggagccggctccccagcag
gccccggtcgtcgagggggagaagccggccgcggccgcacgcttcccgtcgcccttcaag
ctcaccaggatccgcgatctacccccggccctgaaccgagactgcatcgctctcaaggac
ctcctcggcgacccgctcatctccgagtgctggcagttcaattacctgcatgacattgac
ttcctcctggccgccttggacgaggacgtgcggcgcctggtcaaggtgcacatcgtccac
ggcttctggaagcgcgaggatcccagccggctggccctccaggacgcggcatctcgccat
gccaacgtgacgctgcacgcggccttcatgcccgagatgtttggcacgcaccactccaag
atgatggtcctgttccgtcacgacgacacggcccaggtcgtcatccacacggccaacatg
atcctgcgcgactggaccaacatgacgcaggcggcctgggtctcgcccaggatgcccctt
ctcccgtcggcggccggggggcgagagggaagcgccgacgccgagatgggcagcggggag
cgcttcaaggccgacctgctgcgctacctgcgctcctacgacgcccgccggcccacctgc
aaggcgctcgccgaccggctggtgcgctacgacttctcggcggtgcgcggcgcgctcgtg
gccagcgtccccggacggcaccacctggaagacgcagccgggcttttcgggtggccggcc
ctggagcaggccctgcggtcggtccccgtgtcgccgggcccggccgagatcgccatccag
gtctcgtccatcgcgacgctcggcccgacggacgcctggctgcggggcacgttcttcaac
gccctcgccaagggacgtgggccgtccggaacggcgcccaacgggtcctcgacgtctcct
cctcctcctcctcctcaacaacaacaaccaccacaaccccaagcccaagcccaaccaaaa
cccaccttaaaagtcatcttccccacggccgacgagatccgccgctctctcgacggctac
acctcgggcgggtcgatccacaccaagatctcctcgccgcagcaggcccggcagcttgcc
tacctgcgacccctcttctgccactgggccaacgattccggtttgtccgacgacggcacc
gtcgctggcggcagcgcgagcgcgggaggggtcagccacgacgccaaggagctcgacgcg
ggccggcgccgcgccgcgccgcacatcaagacgtacatccgcttcgccggacaagacaac
ggcgggagcggcgcccctcgcaccatcgactgggcgctcctcacgtccgccaacctttcc
aaacaggcgtggggcgaggcggtgacgtcggcgggcgaggtgcgcgtggcatcgtacgag
atcggcgtcctggtgtggccgggcttgtacggcgagggggccacgatgcggccgacgttc
cagacggactggcccgacgaaaaggcagaggacgagcatgaggctgacgggggcgagaac
aaggcggccgtcgtggcgctgcgcatgccgtacagcttgccgctgcggccgtatggcaag
acggaggtgccgtgggtggcgaccatgagccaccacgagccggactggatggggcaggtt
tggaacgtctag

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