Remersonia thermophila: 98125418
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Entry
98125418 CDS
T10833
Symbol
VTJ83DRAFT_430
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
rthe Remersonia thermophila
Pathway
rthe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
98125418 (VTJ83DRAFT_430)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98125418 (VTJ83DRAFT_430)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
98125418 (VTJ83DRAFT_430)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_RIG_2nd
PQQ_2
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
PQQ
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
98125418
NCBI-ProteinID:
XP_070869783
JGI:
Remth1_430
LinkDB
All DBs
Position
1:complement(join(1533022..1534688,1534748..1535780))
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AA seq
899 aa
AA seq
DB search
MDIHRCRFVRYPASAINAVAFTHSSLPSVSAQKKHLLKHVQVRLAIGRANGDIEIWNPLQ
GAWHQELVIPGAKDRSVDGLVWVTDPDEEMGDGKIIHGRSRLFSIGYTTTITEWDLENAR
AKKHASGQHGEIWCLAAQPPSSKRGATSTVGSRKLVAGTVDGNLVLYSIEDGDLKFQKTL
FRTPTRKTKFVSIAFQSHNVVVVGCSNSTICAYDIRNGTLLRQMTLGTDLTGGSKNIIVW
AVKCLPNGDIVSGDSTGQVCIWDGKTYTQAQRIQSHTQDVLCLTVSADGSRIVSGGMDRR
TAIYEPIAGQAGRWSKVFHRRYHQHDVKAMASFESKNMSVVVSGGSDSNPVVLPLRTAGK
EYHRTLPHLPQVAPLQSAPKARLIASWWENEVRIWHLLNPAQHLLDDPQAALNLRKNRKL
VAQILIKGEPYISSAAISDDGSLLVAATAADIKVFQLDFSQGEHGEELQIRKVDMPTTGA
GATRVQVSPDRQWISWVQEGNRVMIAKVHAADSADGISYSISAPRRLARIRRQIPRNILL
GGLGSYDRNITQMAFSPDSKMLSVADLAGYIDTWVLRGPGEAVNGVGGEHDEDGAATSES
SSDSSDEEADHAAGADERWIRNPRGKLLPKLSAAPVVLSFSKTPRDDDDYDLLVITALKT
LLVFNPLRGALSEWSRRNTYQKLPGPFRDTRDQVKGVVWQGHRAWIYGVASLFMLDLSRD
LHPETQDGQNGQKQGIKRKRDGHEAGAGSKMEKHSLAAQRVRTAVAPDGSKWEDVEMADA
AGGGASSSGVEDEDDYDDEDLEEDTDGGELQRLRNDDEERDGGANGNADINGAGKEGNVR
ARWWHTYQFRPILGIVPVEGASAEPGPGDLPPLEVALVERPLESDDLPERYATEAEWER
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacatccaccggtgccgattcgtccgctatcctgcatcggccatcaatgccgtcgcc
ttcacgcactcgtcgctgccgtctgtctcggcgcaaaagaagcacctgttgaagcacgtc
caggtccgcctggccatcggccgtgccaatggcgacattgagatctggaaccccctgcag
ggcgcctggcaccaggagctggttatcccgggcgccaaggaccgaagcgttgacggccta
gtttgggtcaccgacccggacgaagagatgggcgatggcaagatcatccacggcaggtcg
cgcctcttcagcatcggctacaccaccaccatcaccgaatgggatctcgagaacgccaga
gccaagaagcacgccagcggccagcacggcgagatctggtgcctcgccgcccagccgcct
tcctccaagcgcggcgccacgtcgaccgttggcagtcgcaagcttgtcgccggcaccgtc
gacggcaacctcgtgctttactccatcgaggatggcgacctcaagttccagaaaaccctg
ttccgcacgccgaccagaaaaacaaagtttgtcagcatcgccttccagtcccacaacgtc
gttgtcgtcggctgctccaacagcaccatctgcgcctacgacatccgcaacggcacgctt
ctgcgccagatgaccctcggcaccgacctcaccggcggttccaagaacatcatcgtgtgg
gccgtcaagtgcctgcccaatggcgacatcgtgtcgggagactcgaccggccaggtctgc
atctgggacggcaagacgtatacgcaggcccagcgcatccagagccatactcaggacgtc
ctgtgcctaaccgtcagcgccgacggctccaggatcgtctcgggcggcatggatcgccgc
accgccatctacgagcccatcgcgggccaagccggtcgctggtccaaggtgttccaccgc
cgctaccatcagcacgacgtcaaggccatggcttcttttgagagcaagaacatgagcgtg
gtggtgtccggaggctccgactcgaaccccgtcgttctgcctctgcgtaccgccggcaag
gaatatcaccgaacgctcccccatctcccgcaggtcgcccctctgcagagcgcccccaag
gcccgcctcatcgccagctggtgggagaacgaggtccgcatctggcacctgctcaaccct
gctcagcatctgcttgatgatccccaggcggccctcaaccttcgcaagaaccggaaactc
gtcgctcagatcttgatcaagggcgagccttacatatcatcagccgccatcagcgatgac
ggttccctgctggttgccgccaccgccgccgacatcaaggtgtttcaactcgacttctcc
caaggagagcatggcgaggagctccagattagaaaggtggacatgccgacaacgggcgcc
ggagcgacccgggtgcaggtttccccggacaggcaatggatctcgtgggtccaggagggc
aaccgggtcatgatcgccaaggtgcacgccgcggattccgcggatgggatttcttactcc
atttctgcgccccgccggctggcccgaatccgccgccagatccccaggaacattctcctg
ggcggcctgggctcctacgaccggaatatcacgcagatggccttctcgcccgacagcaag
atgctcagcgtcgccgacttggccggatacatcgacacgtgggtcttgcgcggccccggc
gaggccgtcaacggcgtgggcggcgaacatgatgaggacggcgcagcgaccagtgaatcc
tcgagcgattcatctgatgaagaagctgaccacgcggcgggcgcggacgaacgctggatc
cgcaaccccaggggcaagctgcttcccaagctgtccgctgcgcccgttgtcctctccttc
tcaaaaaccccgcgggacgatgacgattacgatttgctggtcatcacggccctgaagacg
ctcctcgtcttcaatcccctgcgcggagccctctcggagtggtcgcggcgcaacacatac
caaaagctccccggccccttccgggacacgcgggaccaggtgaagggggtggtgtggcag
ggccatagggcctggatttacggtgtcgcctcgctgttcatgctggacctgtcccgggac
ttgcatcccgaaacgcaggatgggcaaaacgggcaaaaacaaggcatcaagcgcaagcgc
gacggccacgaggccggcgcgggcagcaagatggagaagcattcgctcgcggcccagcgg
gtccggacggctgtcgcgcccgatgggagcaagtgggaggatgtggagatggccgatgct
gccggcggcggcgcgagcagcagcggggttgaagatgaggacgattacgatgacgaggat
ctggaggaggatacggacggtggggagctgcagcgcctgcggaatgatgacgaggagcgg
gatggtggagccaacgggaatgccgatatcaacggcgccgggaaggagggcaacgtaagg
gctagatggtggcatacgtaccagttccggcccatcctgggcatcgtgcctgttgagggg
gcgtcggcagaacccgggcctggtgatctgccgccgctggaagtcgccctggtggagcgg
cccctggagagcgatgacctgcctgagcggtacgctaccgaggcggagtgggagcggtga
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