KEGG   Remersonia thermophila: 98125418
Entry
98125418          CDS       T10833                                 
Symbol
VTJ83DRAFT_430
Name
(RefSeq) hypothetical protein
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
rthe  Remersonia thermophila
Pathway
rthe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    98125418 (VTJ83DRAFT_430)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rthe03009]
    98125418 (VTJ83DRAFT_430)
Ribosome biogenesis [BR:rthe03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    98125418 (VTJ83DRAFT_430)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd WD40_WDHD1_1st Beta-prop_NUP159_NUP214 ANAPC4_WD40 Beta-prop_RIG_2nd PQQ_2 Beta-prop_TEP1_2nd NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 PQQ Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Cytomega_UL20A
Other DBs
NCBI-GeneID: 98125418
NCBI-ProteinID: XP_070869783
JGI: Remth1_430
LinkDB
Position
1:complement(join(1533022..1534688,1534748..1535780))
AA seq 899 aa
MDIHRCRFVRYPASAINAVAFTHSSLPSVSAQKKHLLKHVQVRLAIGRANGDIEIWNPLQ
GAWHQELVIPGAKDRSVDGLVWVTDPDEEMGDGKIIHGRSRLFSIGYTTTITEWDLENAR
AKKHASGQHGEIWCLAAQPPSSKRGATSTVGSRKLVAGTVDGNLVLYSIEDGDLKFQKTL
FRTPTRKTKFVSIAFQSHNVVVVGCSNSTICAYDIRNGTLLRQMTLGTDLTGGSKNIIVW
AVKCLPNGDIVSGDSTGQVCIWDGKTYTQAQRIQSHTQDVLCLTVSADGSRIVSGGMDRR
TAIYEPIAGQAGRWSKVFHRRYHQHDVKAMASFESKNMSVVVSGGSDSNPVVLPLRTAGK
EYHRTLPHLPQVAPLQSAPKARLIASWWENEVRIWHLLNPAQHLLDDPQAALNLRKNRKL
VAQILIKGEPYISSAAISDDGSLLVAATAADIKVFQLDFSQGEHGEELQIRKVDMPTTGA
GATRVQVSPDRQWISWVQEGNRVMIAKVHAADSADGISYSISAPRRLARIRRQIPRNILL
GGLGSYDRNITQMAFSPDSKMLSVADLAGYIDTWVLRGPGEAVNGVGGEHDEDGAATSES
SSDSSDEEADHAAGADERWIRNPRGKLLPKLSAAPVVLSFSKTPRDDDDYDLLVITALKT
LLVFNPLRGALSEWSRRNTYQKLPGPFRDTRDQVKGVVWQGHRAWIYGVASLFMLDLSRD
LHPETQDGQNGQKQGIKRKRDGHEAGAGSKMEKHSLAAQRVRTAVAPDGSKWEDVEMADA
AGGGASSSGVEDEDDYDDEDLEEDTDGGELQRLRNDDEERDGGANGNADINGAGKEGNVR
ARWWHTYQFRPILGIVPVEGASAEPGPGDLPPLEVALVERPLESDDLPERYATEAEWER
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggacatccaccggtgccgattcgtccgctatcctgcatcggccatcaatgccgtcgcc
ttcacgcactcgtcgctgccgtctgtctcggcgcaaaagaagcacctgttgaagcacgtc
caggtccgcctggccatcggccgtgccaatggcgacattgagatctggaaccccctgcag
ggcgcctggcaccaggagctggttatcccgggcgccaaggaccgaagcgttgacggccta
gtttgggtcaccgacccggacgaagagatgggcgatggcaagatcatccacggcaggtcg
cgcctcttcagcatcggctacaccaccaccatcaccgaatgggatctcgagaacgccaga
gccaagaagcacgccagcggccagcacggcgagatctggtgcctcgccgcccagccgcct
tcctccaagcgcggcgccacgtcgaccgttggcagtcgcaagcttgtcgccggcaccgtc
gacggcaacctcgtgctttactccatcgaggatggcgacctcaagttccagaaaaccctg
ttccgcacgccgaccagaaaaacaaagtttgtcagcatcgccttccagtcccacaacgtc
gttgtcgtcggctgctccaacagcaccatctgcgcctacgacatccgcaacggcacgctt
ctgcgccagatgaccctcggcaccgacctcaccggcggttccaagaacatcatcgtgtgg
gccgtcaagtgcctgcccaatggcgacatcgtgtcgggagactcgaccggccaggtctgc
atctgggacggcaagacgtatacgcaggcccagcgcatccagagccatactcaggacgtc
ctgtgcctaaccgtcagcgccgacggctccaggatcgtctcgggcggcatggatcgccgc
accgccatctacgagcccatcgcgggccaagccggtcgctggtccaaggtgttccaccgc
cgctaccatcagcacgacgtcaaggccatggcttcttttgagagcaagaacatgagcgtg
gtggtgtccggaggctccgactcgaaccccgtcgttctgcctctgcgtaccgccggcaag
gaatatcaccgaacgctcccccatctcccgcaggtcgcccctctgcagagcgcccccaag
gcccgcctcatcgccagctggtgggagaacgaggtccgcatctggcacctgctcaaccct
gctcagcatctgcttgatgatccccaggcggccctcaaccttcgcaagaaccggaaactc
gtcgctcagatcttgatcaagggcgagccttacatatcatcagccgccatcagcgatgac
ggttccctgctggttgccgccaccgccgccgacatcaaggtgtttcaactcgacttctcc
caaggagagcatggcgaggagctccagattagaaaggtggacatgccgacaacgggcgcc
ggagcgacccgggtgcaggtttccccggacaggcaatggatctcgtgggtccaggagggc
aaccgggtcatgatcgccaaggtgcacgccgcggattccgcggatgggatttcttactcc
atttctgcgccccgccggctggcccgaatccgccgccagatccccaggaacattctcctg
ggcggcctgggctcctacgaccggaatatcacgcagatggccttctcgcccgacagcaag
atgctcagcgtcgccgacttggccggatacatcgacacgtgggtcttgcgcggccccggc
gaggccgtcaacggcgtgggcggcgaacatgatgaggacggcgcagcgaccagtgaatcc
tcgagcgattcatctgatgaagaagctgaccacgcggcgggcgcggacgaacgctggatc
cgcaaccccaggggcaagctgcttcccaagctgtccgctgcgcccgttgtcctctccttc
tcaaaaaccccgcgggacgatgacgattacgatttgctggtcatcacggccctgaagacg
ctcctcgtcttcaatcccctgcgcggagccctctcggagtggtcgcggcgcaacacatac
caaaagctccccggccccttccgggacacgcgggaccaggtgaagggggtggtgtggcag
ggccatagggcctggatttacggtgtcgcctcgctgttcatgctggacctgtcccgggac
ttgcatcccgaaacgcaggatgggcaaaacgggcaaaaacaaggcatcaagcgcaagcgc
gacggccacgaggccggcgcgggcagcaagatggagaagcattcgctcgcggcccagcgg
gtccggacggctgtcgcgcccgatgggagcaagtgggaggatgtggagatggccgatgct
gccggcggcggcgcgagcagcagcggggttgaagatgaggacgattacgatgacgaggat
ctggaggaggatacggacggtggggagctgcagcgcctgcggaatgatgacgaggagcgg
gatggtggagccaacgggaatgccgatatcaacggcgccgggaaggagggcaacgtaagg
gctagatggtggcatacgtaccagttccggcccatcctgggcatcgtgcctgttgagggg
gcgtcggcagaacccgggcctggtgatctgccgccgctggaagtcgccctggtggagcgg
cccctggagagcgatgacctgcctgagcggtacgctaccgaggcggagtgggagcggtga

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