Remersonia thermophila: 98125483
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Entry
98125483 CDS
T10833
Symbol
VTJ83DRAFT_4359
Name
(RefSeq) hypothetical protein
KO
K17301
coatomer subunit beta
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98125483 (VTJ83DRAFT_4359)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rthe04147
]
98125483 (VTJ83DRAFT_4359)
Membrane trafficking [BR:
rthe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
98125483 (VTJ83DRAFT_4359)
Exosome [BR:
rthe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
98125483 (VTJ83DRAFT_4359)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
Coatomer_g_Cpla
INTS1_R4
HEAT
API5
AP4E_app_platf
INTS7_N
Motif
Other DBs
NCBI-GeneID:
98125483
NCBI-ProteinID:
XP_070865809
JGI:
Remth1_4359
LinkDB
All DBs
Position
4:join(881788..882089,882158..884580,884669..884820)
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AA seq
958 aa
AA seq
DB search
MSFLDNAYSLVKDSATDGTPTVAELRTQLEKGTDETKVETMKRILTIMLNGDPMPQLLMH
IIRFVMPSKHKPLKKLLYFYYEICPKLDAQGKLKQEFILVCNGIRNDLQHPNEFIRGNTL
RFLCKLREPELLEPLLSSARQCLEHRHAYVRKNAVFAIASIYQHSPSLIPDAAELIATFL
EGESDPTCKRNGFAALSSISHDKALAYLSTVFDGIPNAEELLQLVELEFIRKDAVHNPQN
KARYLRLIFDLLEANTSTVVYEAASSLTALTNNPVAVKAAAGKFIELAIKEPDNNVKLIV
LDRVDQLRQKSEGILDDLIMEILRVLSSPDIDVRRKALEIALEMVSSKNVEEVVLLLKKE
LSKTVDQEYEKNSEYRQLLIHSIHQCAVKFSEVAASVVDLLMDFIADFNNASAVDVINFV
KEVVERFPALRPAITKRLVETLKEVRAGKVYRGILWIIGEYSLDEKDIRDAWKGIRASLG
EIPILASEQRLLDNLDNEEENKEEEQVNGHAGKPTGSRKILADGTYATETALTSQAAAAA
KLEAVKASSKPPLRQLILDGDYYLATVLAATLTKLVMRHSEISSEEARTNALRAEAMLIM
ISVIRVGQSQFVKAPIDEDSVDRIMSCVRSLAEFKQHKELETVYLEDTRKAFRAMVQVEE
KKRAAKAALDKAKTAVQVDDVVSIRQLSKKNAVGGVDDIEVDLERATGGDSGASEDLSSK
LSRVVQLTGFSDPVYAEAYVKVHQFDIILDVLLVNQTTDTLQNLTVEFATLGDLKVVERP
TSQSLGPHDFHNVQCTIKVSSTDTGVIFGNVVYEGAHSTDTNVVILNDLHVDIMDYIQPA
TCSETQFRTMWTEFEWENKVNINSKAKSLRDFLDQLMACTNMNCLTPEASMKGDCQFLSA
NLYARSVFGEDALANLSIEKEGEDGPITGFLRIRSRSQGLALSLGSLKGLNKIGSVAA
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcctcgacaacgcctacagcctggtcaaggatagtgccacagatggcacgccg
accgtggccgagctgcgcacgcagcttgagaagggaaccgacgagaccaaggtcgagacc
atgaagcgcattctcaccatcatgctcaacggcgaccccatgccacaattgctcatgcac
atcatccgcttcgtcatgccgtccaagcacaagcccctaaagaagcttctttacttctac
tacgagatatgtcccaagctggatgcccaggggaagctgaagcaggagtttattctagta
tgtaacggcatccgcaacgatttgcagcacccgaacgagttcatccgcggaaacacgctg
cgcttcctctgcaagcttcgcgagcccgagcttctcgagccccttctctcctcggcgcgg
caatgcctcgaacaccgccacgcctacgtgcgcaagaacgccgtcttcgccatcgcgtcc
atctaccagcattccccatccctcatccccgacgccgcggagctcatcgccaccttcctc
gagggcgagagcgaccccacatgcaagcggaacggcttcgctgccctctccagcatcagc
cacgacaaggcgctggcttatctcagcacagtcttcgatggcatcccgaacgccgaggag
cttctgcagctggtcgagctcgagttcatccgcaaggatgccgtccacaaccctcaaaac
aaggcccgctacctccggcttattttcgacttgctcgaggccaacacgtcgacggtggtc
tacgaggcggcgtcgtccttgaccgcgctcaccaacaaccccgtcgccgtcaaggccgcc
gcgggcaagttcatcgagctggccatcaaggaacccgataacaatgtcaagctgatcgtg
ctggatcgcgttgaccagctgcgccagaagagcgaaggcattctcgatgacctcatcatg
gagatcctgcgcgtcctctccagcccggacattgacgtgcgccggaaggctctggagatc
gctctcgagatggtgtccagcaagaacgtcgaggaggtcgtcctgctcctcaagaaggag
ctgtccaagacggtggaccaggagtatgagaagaacagcgagtaccgccaattgctcatc
cattcgatccaccagtgcgccgtgaagttctccgaggtcgccgccagcgtggtggacctg
ctcatggactttatcgccgacttcaacaacgcctcggctgttgatgtcatcaacttcgtc
aaggaggttgttgagaggttccccgccctgcggcctgccatcacgaagaggttggtcgag
acgctgaaggaggtgcgcgcaggcaaggtgtaccgcggcattctatggatcatcggcgag
tactcgctcgacgagaaggacatccgggacgcgtggaagggcattcgcgcgagcctgggt
gagattcccatcctggcttcggagcaaaggctgttggataacctggacaacgaggaggag
aacaaggaagaagagcaggtcaacggccacgccggcaagccgaccggttcgcgcaagatc
ctggctgatggcacctacgctaccgagactgcgctcaccagccaggctgccgccgccgcc
aagctggaggccgtcaaggcgtcttcgaagccgccgctccgccagctcattctggatggc
gactactaccttgcaacggtccttgccgcgactcttaccaagctggtcatgcggcactcg
gagatctcgtctgaggaggcgcgtacgaacgctctgcgtgccgaggccatgctcatcatg
atctcggtcatccgcgtcggccagtcgcaattcgtcaaggcgcctatcgacgaggactcc
gtggatcgcatcatgagctgcgtgcgctcgcttgccgagttcaagcagcacaaggagctc
gaaacagtctacctcgaggacacacgcaaggccttccgcgccatggtccaggtagaggag
aagaagcgcgccgccaaggcggcgctcgacaaggccaagacggccgttcaagtcgatgac
gtggtctcgatccgccagctgtccaagaagaacgcggttggcggcgtcgacgacatcgag
gttgatctcgagagggccacgggcggtgatagcggtgcctcggaagatctgtccagcaag
ctgagccgcgttgttcagctcaccggcttctcggaccccgtctacgccgaggcctacgtc
aaggtgcaccagttcgacatcatcctcgacgtcctgctggtcaaccagaccaccgatact
ctccagaacctgacggtcgagttcgcaacgctgggcgatctcaaggtcgtcgagcggccg
accagccagagcttgggacctcacgacttccacaacgtgcagtgcaccatcaaggtgtcg
tcgaccgacacgggcgtcatcttcggcaacgtcgtgtacgagggcgcccactcgacggac
accaacgtggtgatcctcaacgacctgcacgtcgacatcatggactacatccagcccgcc
acgtgctctgagacgcagttccgcaccatgtggaccgagttcgagtgggagaacaaggtc
aacatcaactccaaggccaagtcgctgcgcgacttcctcgaccagctcatggcctgcacg
aacatgaactgcctgacgcccgaggcgagcatgaagggtgattgccagttcctgagcgcg
aacctgtacgccaggagcgtgtttggcgaggacgccctggccaacctgagcatcgagaag
gagggcgaggatggccccatcacgggcttcctcaggatacgcagccgctctcagggcctg
gccctcagcctgggctcgctcaaggggctgaacaagattggttcggttgcggcatga
DBGET
integrated database retrieval system
