Remersonia thermophila: 98125593
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Entry
98125593 CDS
T10833
Symbol
VTJ83DRAFT_4458
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98125593 (VTJ83DRAFT_4458)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
98125593 (VTJ83DRAFT_4458)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Motif
Other DBs
NCBI-GeneID:
98125593
NCBI-ProteinID:
XP_070865908
JGI:
Remth1_4458
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Position
4:complement(1204415..1207114)
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AA seq
899 aa
AA seq
DB search
MSSMPMIKSGRGPGKAKPKPQNRISRIMEREQRIRERSVASAASVDTPAAPAAPAAGSSN
RPKCQNPQCDKSDVRDGACQNCGRVVYESNIVAEVTFGESANGAAVVHGSYVAADQGGIR
PTASGMAFRRIAGAGASEARERSLREAKQLMNQFAHQLQIAPHVADKAFQLYKVAANSNF
IQGRRKATVAAVCVYAMCRKEDNNRVMLIDFADIIKTDVFLLGRCYKDLLATFHDLKEGT
KPIIIEDLIFRFASKLEFLHDTNKVALSAVRIAQRMRHDNITHGRRPAGICGAAIIMAAR
AHNYRRTVREVVYIAKVTMATLQERMEEFANVPSAQMTIRDFHEAEKLPEAAADPPFVIK
QSKEWQEKHRKGRKRKAAAVAGEEGGAAEQPQGSPKRQRADAEGRQASTPSASTHASAPA
GGQPPSAIPVDPALQSNDAASQGPTPAVDKDGFAVPFRKPTAEDLTIANVATADDDGQLE
ELANEFGDSEEGEEDEPDEVEVDPNSEIAMAAAQGIMLPGMESMRIKPREARPGPGPGPG
DEQDGDGEGAGKKKRKQRPKLVIDEEWELDESNLEREMQQHLNDPALIGASASVTRDIEQ
TREREAATQASRSAPAPAAPAAETNNAASATSHEESNSAQPESAATTTTTTAAASTSTPT
VPWVTPPSKVSDDPIVREDEFADDPEVMYCKLSEEDVQLKEMIWANHNKDYMRKVQQKIF
EAKVSKNKPTKPKRQRARKPRIGEGQAMPAGSATEAAQNMLRTRAISTKLDYSRMGNLFE
FSKKGPGSAYGGTTTASSVGSRSALASSAGSDAGSGSDDDGEPNGGVSSLKAAAASARER
LAKALAPPGDEEDEEEEEEEEDAEDEEPPNGFGEDDYQEGGEEEFDPFGDHDGADDYDE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatgcccatgatcaagtccggcagaggccccggcaaggccaagccgaaaccc
cagaaccgcatcagccggatcatggagcgcgaacagcgcatccgcgagaggtcggtcgcg
tcggcggcatcggtcgacacgcccgctgcccccgccgctccggctgcagggtcgtccaac
cgtcccaagtgccagaatccgcagtgcgacaagtcggacgtgcgggacggtgcctgccag
aactgcggtcgcgtcgtctacgagagcaacatcgtggccgaggtgacctttggcgagagc
gccaacggcgctgccgtggttcacggaagctacgtcgctgcggatcagggaggaattcgc
ccgacggccagtggcatggccttccgtcgcatcgctggcgcgggcgccagcgaggcgcgg
gagcgcagcctgcgcgaggccaagcagctcatgaaccagttcgcccatcagcttcagatc
gcgcctcacgttgccgacaaggcgttccagctctacaaggtggcggccaacagcaacttc
atccagggccgtcgcaaggcgaccgtggcggccgtctgcgtgtacgccatgtgccgcaag
gaggacaacaaccgggtcatgctcatcgactttgccgacatcatcaagacggatgtgttt
cttctcggccgctgctacaaggacctgctggccaccttccacgacctcaaggagggcacc
aaacccatcatcatcgaggatctcatcttccgcttcgcgagcaagctcgagttcctccac
gacaccaacaaggtggcgctctcggccgtgcgcatcgcccagcgcatgcgccacgacaac
atcacccacggccgtcgccccgccggcatctgcggcgccgccatcatcatggccgctcgc
gcccacaactaccggcgcaccgtccgcgaggtggtgtacatcgccaaggtcaccatggcc
acgttgcaggagcgcatggaagagttcgccaacgtcccgtccgcgcagatgaccatccgc
gattttcacgaagccgagaagctgccagaggccgcggccgaccctccgtttgtcatcaag
caaagcaaggaatggcaagagaagcacaggaaaggacgaaagagaaaggcagcagccgtg
gccggcgaggagggcggcgcggcggaacagccccagggctcccccaagcggcagcgggcc
gacgccgagggccgacaagcatccacgccctcggcatcgacccacgcatccgctcccgcc
ggagggcaaccgccgagcgccatccccgtcgacccggctctgcagagcaacgatgcggcc
tcgcagggccccacgccggccgtcgacaaggacgggtttgccgtgccgttccggaagccc
accgccgaggacttgaccatcgccaacgttgccacggccgacgacgacggccagctggag
gagctggccaacgagtttggcgattccgaggagggcgaagaggacgagcccgacgaggtg
gaagtcgatccgaacagcgagatcgccatggccgccgcccagggtatcatgctgccaggc
atggagagcatgcgaatcaagccgagagaggcccgtccgggcccgggtcccggccccggc
gacgagcaggacggcgatggcgaaggcgctggcaagaagaagaggaaacagaggccgaag
ctcgtcatcgacgaggagtgggagctggacgagtcgaacctggagcgtgaaatgcagcag
catctcaacgacccggccctcatcggtgcctctgcaagcgtgacccgggatatcgagcag
actcgggaacgagaggctgccacccaagcgagccggtctgcccctgctccggccgcgccg
gccgcagaaacgaacaacgccgcatcggccacgagccatgaagaaagcaacagcgcacag
cccgagtcggccgccaccaccaccaccaccaccgctgccgcaagcacaagcacacccacc
gtgccctgggtcacgccgccctccaaggtgtcagacgaccccattgtgcgcgaggacgag
ttcgcagatgatcccgaggtcatgtactgcaagctgtccgaggaagacgttcagctcaaa
gaaatgatctgggccaatcacaacaaagactacatgcgcaaggtccagcaaaagattttt
gaggccaaggtttcgaaaaacaagccgaccaagccgaagcggcagcgcgcgcgaaagccc
cgcatcggcgagggccaggccatgcccgccggttccgctaccgaggcggcccagaacatg
ttgcggacgcgcgccatcagcaccaagctcgactactcacgcatggggaatctgtttgag
ttctccaagaaggggcctgggagcgcgtacggcggcacgacgacggcgagctcggtcggg
agtcgcagcgcgttggcgagcagcgccgggagcgacgcggggagcggcagcgatgacgac
ggcgagccgaacggcggcgtcagcagcctgaaggccgcggcagcctcggcgagggagagg
ctggcgaaggcgcttgctcctccaggggacgaggaagacgaagaagaagaggaggaggag
gaggatgcggaggacgaagagcctcccaacggcttcggcgaggacgactaccaagaagga
ggagaggaagagtttgatccgtttggggatcacgacggggccgacgactacgatgagtga
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