KEGG   Remersonia thermophila: 98125610
Entry
98125610          CDS       T10833                                 
Symbol
VTJ83DRAFT_4473
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
rthe  Remersonia thermophila
Pathway
rthe03020  RNA polymerase
rthe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    98125610 (VTJ83DRAFT_4473)
  09124 Replication and repair
   03420 Nucleotide excision repair
    98125610 (VTJ83DRAFT_4473)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rthe03021]
    98125610 (VTJ83DRAFT_4473)
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98125610 (VTJ83DRAFT_4473)
Transcription machinery [BR:rthe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     98125610 (VTJ83DRAFT_4473)
  RNA polymerase III system
   RNA polymerase III
     98125610 (VTJ83DRAFT_4473)
  RNA polymerase I system
   RNA polymerase I
     98125610 (VTJ83DRAFT_4473)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      98125610 (VTJ83DRAFT_4473)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DUF7130 DZR_2 DUF7129 Zn_ribbon_DZR_6
Other DBs
NCBI-GeneID: 98125610
NCBI-ProteinID: XP_070865923
JGI: Remth1_4473
LinkDB
Position
4:join(1252865..1253091,1253249..1253273)
AA seq 83 aa
MSREEYQVPNTGSGNSPAIGGGSFNAGQRDFSGESGGGVIYYICGDCAVRVPLERDTPIR
CQKCGARVLYKERTKRMVQFEAR
NT seq 252 nt   +upstreamnt  +downstreamnt
atgtcccgcgaggagtaccaggtccccaacaccggctccggcaactcgcccgccatcggc
ggcggctccttcaacgcgggccagcgcgacttctcgggcgagagcggcggcggcgtcatc
tactacatctgcggcgactgcgcggtgcgcgtccctctggagcgcgacacgccgatccgc
tgccaaaagtgcggcgccagggtgctgtacaaggagcggaccaagaggatggtgcagttc
gaagcgcggtag

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