Remersonia thermophila: 98125700
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Entry
98125700 CDS
T10833
Symbol
VTJ83DRAFT_4554
Name
(RefSeq) hypothetical protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
rthe Remersonia thermophila
Pathway
rthe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
98125700 (VTJ83DRAFT_4554)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98125700 (VTJ83DRAFT_4554)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rthe04147
]
98125700 (VTJ83DRAFT_4554)
Membrane trafficking [BR:
rthe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
98125700 (VTJ83DRAFT_4554)
Exosome [BR:
rthe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
98125700 (VTJ83DRAFT_4554)
Exosomal proteins of colorectal cancer cells
98125700 (VTJ83DRAFT_4554)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Vps36-NZF-N
zf-Sec23_Sec24
GRAM
Zn_ribbon_RanBP
EutK_C
Motif
Other DBs
NCBI-GeneID:
98125700
NCBI-ProteinID:
XP_070866004
JGI:
Remth1_4554
LinkDB
All DBs
Position
4:join(1507862..1507962,1508074..1508209,1508276..1509976)
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AA seq
645 aa
AA seq
DB search
MFLKQLDLTTALRPSYLPDEDLLFVQDNVGLYEGKFKLPNHQNGQVYLTSHRICYVDKAE
PRKYSVALDLKDVERFEFYGGFLKSSAKITLVPKAVKRSSLRSPGLTGSPSRSATASPVH
HPDGPVRGSTANALPATAATWVCTICTFANPVPSNFDPTTASVHTPLPPCLACGIKPTLT
HVLKAAISTAASRQSGAPALQTPLPVRPPPASGLSSGADRPQDSPGHTDPDASFQCPRCT
FLNHPSLLSCEMCGGPLISNDLPTELTQRGRPVTASPGPVLNPLSSLPVGTENLESIKLS
FRGGGEKIFYERLKGAMTQRKWLLQNAPPIPKASRPGDALLDGSGAGSGSGTPSGQPSRP
KIGGIAGLEHHSQAMRKNNEMVIGSAFEDLEALMASAKEIIALAETFARQVKGASGGSSA
SENALLADSFSQLGLITTKDIVGSKSGDSDSLYLSELSRTLAEFLTDDRRGVLRKAGGII
SLVDLWAMFNRARGGVELVSPADFEKAANLWEKLNLPVRLRTFKSGVKVVQARDRTDETT
IKALLAWMRDLHEFPPEREVPWDWRRFGRGVTARDVAERFGWSIGVAEEELEMAEEKGVL
CREEGIEGLKFWENFIDTGEGKRYKDEKTLESERMMRVLKESGMI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaaagcagctcgacctgacaaccgctctgcggccctcctatcttcccgacgaa
gaccttctctttgtccaggacaacgtggggttgtatgagggaaagttcaagctccccaat
caccagaacggtcaggtctacctgacatcgcatcggatatgctatgtggacaaggccgag
ccaaggaagtactcggtcgccttagacctgaaggatgttgagcgcttcgagttctatggc
ggcttcctcaaatcgtcggccaagatcaccctggtgcccaaggccgtaaagcgcagttcc
cttcgctcgccaggcctgaccgggagcccatcgcggagtgctacggcgtcgcccgttcac
caccctgacgggccggtccgaggatcgaccgccaacgccctgcctgccaccgcggcaaca
tgggtctgcaccatctgcaccttcgccaacccggtaccgtccaacttcgatcccaccacg
gctagcgtgcacacgcctcttccaccatgccttgcgtgcgggatcaagccgaccctgacg
cacgtcctcaaggctgccatctccaccgctgcgagcaggcaatccggggctccggcactc
cagacgccgctgcctgtccggcccccgccagcatccggcctctcctccggggccgatcgc
ccgcaggactcacccgggcatacggatccagatgcgtcgttccagtgtccccgctgcacc
tttctgaaccacccatctctcctctcttgcgagatgtgtggcgggccgctgatctcgaac
gatctcccgaccgagctcacgcagcgcggccgcccggtcacggcatcgcccggccctgtc
ctcaaccccctgagctcgctccctgtgggcacggagaacctagagagcatcaagctctcg
ttccgcggcggcggcgagaagatcttttacgagaggctcaagggcgccatgacgcaacgg
aaatggctgctccagaatgcgcctcccatcccgaaggcctcgcgcccgggcgatgcgttg
ctggacggctccggcgccggatccggatccggaaccccgtcgggccagccgtctcgtccc
aagattggcggcattgcgggtctcgagcaccacagccaagccatgcgcaagaacaatgag
atggtgattggcagcgcctttgaggatctcgaggcgctcatggcatcggccaaggaaatc
atcgcgctcgccgagacgttcgctcgacaggtcaagggcgcgtcaggcgggtcgagcgcc
agcgaaaacgcgcttctggccgactcgttcagccagctggggctgatcacgaccaaggac
attgtcggcagcaagagcggcgacagcgactcgctgtacctgtcggagctatcccgcacg
ctggccgagttcctcaccgacgaccggcgcggcgtgctccgcaaagccggcggcatcatc
tcgctcgtcgacctctgggccatgttcaaccgggcgcgcggcggcgttgagctcgtgagc
ccggccgactttgagaaggcggccaacctgtgggagaagctcaaccttccggtgcggctg
cgcaccttcaagtcgggcgtcaaggtggtgcaggcccgcgacaggaccgacgaaaccacc
atcaaggcgctgctggcgtggatgcgggatctgcacgagttcccgcctgagcgggaggtg
ccgtgggactggcgcaggtttggccgtggcgtcacggcgagggatgtcgccgagcggttt
gggtggagtatcggcgtggccgaggaagagctcgagatggccgaggagaagggcgtgctg
tgtcgcgaggagggtatcgaagggctgaagttctgggagaacttcatcgacacgggcgag
gggaagagatacaaggacgagaaaacgttggagagcgagaggatgatgcgggtattgaag
gaatccggaatgatctag
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