Remersonia thermophila: 98125797
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Entry
98125797 CDS
T10833
Symbol
VTJ83DRAFT_4641
Name
(RefSeq) hypothetical protein
KO
K17302
coatomer subunit beta'
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98125797 (VTJ83DRAFT_4641)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rthe04147
]
98125797 (VTJ83DRAFT_4641)
Membrane trafficking [BR:
rthe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
98125797 (VTJ83DRAFT_4641)
Exosome [BR:
rthe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
98125797 (VTJ83DRAFT_4641)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Prothymosin
Motif
Other DBs
NCBI-GeneID:
98125797
NCBI-ProteinID:
XP_070866091
JGI:
Remth1_4641
LinkDB
All DBs
Position
4:complement(join(1762266..1763223,1763280..1764097,1764151..1764276,1764336..1764535,1764597..1764787,1764846..1764987,1765061..1765106,1765180..1765203,1765424..1765441))
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AA seq
840 aa
AA seq
DB search
MRLDVKRQLFARSERVKGIDFHPTEPWILTTLYSGHVYIWSYETQQVVKTFELTDVPVRA
GRFIARKNWIICGSDDFQIRVYNYNTNEKITSFEAHPDYIRAIAVHPTQPFVLTASDDMT
IKLWDWEKGWKNVRVFEGNSHYVMSLAINPKDTNTFASACLDRTVKIWSLGSSTPNFQLE
AHETKGVNHVDYYPHSDKPYLLTTSDDRTVKVWDYTTKSLIATLEGHTNNVSFACYHPEL
PIIISGSEDGTVRIWNANTYRFEQSLNYGLERAWCVAYQKGKQGIAVGFDDGSVVIKLGR
EEPAVSMDGSGKIIWARHNEVVSAVIKGGEATKDNEPITLTTKDLGNAEIYPQSLIHSPN
GRFAAICGDGEYIIYTALAWRNKAFGQALDFVWASKENSNDFAIRESATSVKVFKNFQEK
KGGLDVPFAADGLTGGVLLGVKGQGGISFYDWQTGGLVRRIEVEPKQVYWSDSGELVALA
CEDTTYVLRFSREAYNEAVQNGQVEEDGVEAAFDVVTDINESIRSAEWLGDVLIYTNTTN
RLNYLVGDQTYTVSHFDKPMYILGYLQRDSRVYLTDKDLSVTSFALSLPVLEYQTLVLRE
DMETAAELLPSIPQDQLNKIARFLEGQGHKELALEVATDPEHKFELALALNRLDIALELA
READADHKWKTLGDAGLAAWDVPLATECFVRAKDLGSLLLVYTSTNDREGLAKLAEQASE
AGAHNVAFTCKWSVGDVDGCVDVLVKTGRLAEAVLFAQTYKPSLAPALVKQWKESLEKQK
KGRVAKAIGVPGEDEELFPEWEEWLRLEKEGPKVAEKAEEEEEEESEEADEDDEEEEEEE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggatgtcaagcgccagctctttgcccgctctgagcgggtcaaaggcatcgac
ttccacccgaccgagccatggatcctcacaacgctctacagtggccacgtttacatctgg
tcgtacgagacgcagcaggtcgtcaagaccttcgagctcaccgatgtccccgtgcgcgcc
ggtcgcttcattgccagaaagaactggattatctgcgggtcggatgatttccaaatccgc
gtctacaattacaacacgaacgaaaagataacgtctttcgaggcccacccggattacatc
cgcgccatcgccgtccaccctacacaacccttcgtcctcaccgccagcgatgacatgacc
atcaagctttgggactgggagaaggggtggaagaacgtccgcgtcttcgagggcaattcg
cactatgtgatgtcgctggccatcaaccccaaggacaccaacacgttcgcttcggcctgc
ctggacaggaccgtcaagatctggagcttgggctcgtccacacctaacttccagctcgag
gctcacgagaccaagggcgtcaaccacgtcgactactacccgcacagcgacaagccgtac
ctgctcacgacatcagacgaccgcacggtaaaagtgtgggactacacgacgaagagcctg
atcgccactctagaagggcataccaacaacgtgtcgtttgcgtgctaccacccggagctg
cccatcatcatctcgggttcggaggatggtaccgtgaggatatggaacgccaacacgtac
cgcttcgagcagtcgctcaactacggcctcgagcgtgcgtggtgcgttgcctaccaaaag
ggcaagcagggcatcgccgtcgggttcgacgacggctcggtcgtgatcaagcttggtcgc
gaggagccggccgtgtcgatggatggctccggcaagatcatctgggccaggcacaacgag
gtggtgtctgccgttatcaagggcggcgaggccaccaaggacaacgagcccatcaccctt
acaaccaaggacctgggcaacgccgagatctatccgcagagcctgatccactcgcccaat
ggtcgcttcgccgccatctgcggcgacggcgagtatatcatctacacggcgctggcctgg
cgcaacaaggcattcggccaggccctcgactttgtctgggcctccaaggagaactcgaac
gactttgccatccgcgaatcggccaccagcgtcaaggtgttcaagaacttccaggagaag
aaggggggtctcgatgtgccgttcgcggccgacggcttgacgggtggcgtgctgctgggt
gtcaagggccagggcggtattagcttctacgactggcagacgggtggcctggtgcgccgt
attgaggtcgagcccaagcaggtgtactggagcgacagcggcgagctggtggctctggcc
tgcgaggacacgacgtacgtgcttcgcttttcgcgcgaggcctacaacgaggcggtgcag
aacggccaggtcgaggaggacggcgtcgaggctgcgtttgacgtggtcaccgatatcaac
gaaagcatccggtccgccgagtggctgggcgatgttctcatctacaccaacacgaccaac
cggctcaactacctcgtcggcgaccaaacctacacggtgtcccacttcgacaagcccatg
tacattctgggctacctccagcgcgacagccgcgtctacctcaccgacaaggatttgtcg
gtcacgtctttcgccctctccctgcccgtactggaataccagaccctcgttctgcgtgaa
gacatggagacggccgccgagctcctccccagcatcccgcaagaccagctcaacaagatt
gcgcgcttcctcgagggccagggccacaaggagctcgcccttgaagtggctaccgaccca
gagcacaagtttgagctggcgctggccctcaaccgcctcgacatcgccctcgagctcgcc
cgcgaggctgacgccgatcacaagtggaagaccctcggcgacgccgggcttgccgcctgg
gatgtgcccctcgcgaccgaatgtttcgtccgcgccaaggacctggggtccctgctgctg
gtctacacctcgacgaacgaccgcgaaggcctcgccaagctggccgagcaggcgtccgag
gcgggcgcgcacaatgtcgccttcacctgcaagtggtcggtgggcgacgtcgacgggtgc
gtcgatgtgctggtgaagacgggccgtcttgccgaggcggtgctcttcgcgcagacctac
aagccgagccttgctccggcgttggtcaagcagtggaaggagagcctggagaagcagaag
aagggacgggttgccaaggcgattggtgtgccgggcgaggatgaggagctgttcccggag
tgggaggagtggctgaggttggagaaggaggggccgaaggttgcggagaaggcagaggaa
gaggaagaggaggagagcgaggaggcggatgaggacgacgaggaagaggaggaagaggag
taa
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integrated database retrieval system
