Remersonia thermophila: 98125932
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Entry
98125932 CDS
T10833
Symbol
VTJ83DRAFT_4763
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98125932 (VTJ83DRAFT_4763)
04121 Ubiquitin system [BR:
rthe04121
]
98125932 (VTJ83DRAFT_4763)
Enzymes [BR:
rthe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
98125932 (VTJ83DRAFT_4763)
Membrane trafficking [BR:
rthe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
98125932 (VTJ83DRAFT_4763)
Ubiquitin system [BR:
rthe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
98125932 (VTJ83DRAFT_4763)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Zn_ribbon_19
zf-ANAPC11
zf-RING_Vps41
PRC2_EED_ins
Prok-RING_1
Zn_ribbon_IFT122_C
HypA
DUF7385
zf_RING_Vps8
Prok-RING_4
zf-P11
zf-RING_16
DUF7117
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
98125932
NCBI-ProteinID:
XP_070866213
JGI:
Remth1_4763
LinkDB
All DBs
Position
4:join(2200135..2200272,2200367..2200833,2200936..2201764)
Genome browser
AA seq
477 aa
AA seq
DB search
MASRAGHHLPFIVGREIVYCYGCQHEWYRESPSLSCPACGSDFVEIVDFENDPRSMNDGP
APRGMGGHASPHPHQPFGSDSDPEEGDIEELGYGFGSRPRPTPGARFRDASSHRRTPIDE
GDVIFRRLAEILDEFGPARPMREASPGGFFPADESRSSPPTGTRIHQQTTFQNGPFGTTT
RVTVTSGTFGTTPDVGSPNITTLLDQLFGSPFPAGDPARRVRTGPEPDMAFAGGPFLGGL
SGLLQSLYNPQHGVQGDHVYTQEDFDRIISQLMEQSVQTNAPPPASQDAMDRLERKLVDD
EILGPEGKAECTICIDELKRGQEVMVLPCKHWYHEECVVLWLREHNTCPMCRKPIEEAGG
GPGHGNASGSSSSNSNNNNNNNNNSNFGGGWGGVRQGSQQGSSSRAERLNAARRRSIQAP
APPREWGSGAGWGWGMDEAQHEAHQPPSGSQTRRRSQHEAGGGGALGWLRDHWARGR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgcgcggggcatcaccttcctttcatcgtcgggcgagagatcgtttactgt
tacggatgccagcacgagtggtaccgcgaatccccttcgctgagctgcccggcctgcgga
agcgactttgttgagattgtcgactttgaaaatgaccctcgatctatgaacgacggccct
gcccctcgtggcatgggcggccacgccagcccgcatcctcaccagcctttcggctccgac
tcggatcccgaagaaggcgatatcgaagagctcggctacggcttcggcagcagaccgcgg
ccgacccccggcgcccgcttccgcgatgccagcagccaccgcaggaccccgatcgacgag
ggcgacgtcatctttcgccgacttgccgagatcctggatgaatttggtcccgcgagaccc
atgcgcgaagcctcgccgggtggcttcttcccggccgacgagagccgctcctcaccaccc
acgggaacccgtattcatcagcagacgacgttccagaacggcccgttcggcaccacaacg
cgcgtcacggtgaccagcggcacgttcgggaccactcccgacgtggggtctcccaacatc
accaccttgctcgaccagctcttcggcagccccttccctgcgggcgacccagcccgccgt
gtccggaccgggccggagccggacatggccttcgcgggaggacccttcctcggcggactc
agcgggctgctgcagtcgctgtacaacccccagcatggcgttcaaggcgatcacgtctac
acgcaggaggactttgaccgcatcatcagccagctgatggagcagtcggtgcagaccaac
gccccgccgcccgcgtcgcaggacgccatggaccgcctcgaaaggaagctcgtcgacgac
gagattctcgggcccgagggcaaggccgagtgcaccatctgcatcgacgagctcaagcgc
ggccaggaggtcatggtcttgccttgcaagcactggtaccacgaagagtgcgtcgtgctc
tggctcagggagcataacacgtgccccatgtgtcggaagccgatcgaagaggccggcggc
ggccctggccacggcaacgccagcggcagcagcagcagcaacagcaacaacaacaataac
aacaataacaacagcaactttggcgggggatggggcggagtccggcagggctcccagcag
ggctcttcgtcgcgcgccgagcgcttgaacgcggcccggcgtcgcagcattcaagctcct
gcgccgccgagggaatggggcagcggagcaggatggggttggggtatggatgaagcacag
cacgaggctcatcagcccccgtccgggtcgcagacacggcggaggtcgcagcatgaagcg
ggcggtgggggtgcgctgggatggttgagggatcattgggcgaggggtcgttag
DBGET
integrated database retrieval system
