Remersonia thermophila: 98126003
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Entry
98126003 CDS
T10833
Symbol
VTJ83DRAFT_4827
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
rthe Remersonia thermophila
Pathway
rthe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
98126003 (VTJ83DRAFT_4827)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98126003 (VTJ83DRAFT_4827)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
98126003 (VTJ83DRAFT_4827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
98126003
NCBI-ProteinID:
XP_070866277
JGI:
Remth1_4827
LinkDB
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Position
4:complement(join(2432458..2432738,2432831..2433293,2433382..2434812))
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AA seq
724 aa
AA seq
DB search
MSAPPPPAPPSGAAAPPGNGAPRPQVIARKPATANPLVARKKPRPKPALSRPPAPAAALA
PSKGGPVAPKKPILNDPNDPKMRQLAQTRAQNGGWSEQVSAKYTEFPLVVTKKSLLEGIR
HHIMRLNKGKGEPGKAKGDAIVDVTNQDQFPRPVTLLRRDPRLPPAHRMAVKEESTPPPL
DPAAAAEYERARQLKAEKEAQRALDQAQIAPVLRGSNDPKPTKKDNQKKDKPIAFYGRNS
DMQKKESKIHYEETWPWHLEDAEGKSGVWVGSYIASLSDLNVALVIDGARFRMIPLERFY
RFDEKPKFETLSLDDAEKLMYEVKEVKRWVMKQKEQEQLEREKSETRQFLRGPARVKTES
LTSRLARRSERQDDFELDMEGDEFQDDDEAPNIEGDEDEDTKEAKERIRREQVQANTFGE
GEEAKVEQEERELQLERLRAKMIGKQTVKTLKKLEHAHDFDDFESGSEENNPFTDASVRR
GGIRRRGGARGRRRRQKGPGRRLGGHDQGQHDALGPAEGGRRAQEGQQAQEAWVPQHVRV
ERQRGGPQEAQDDGGQGLRRAQPRRHPIPGRPKPPAAGSSAMSDGEATAGEMSDAPGAKL
KQKFKAKTVMRPAPGATPSGSRAGSPAPGGGGSAAAAKPTGTPSGSPPPTGQAPDKIQPK
EIADAIATHAKDGIALPALFQMFQKRINKPGHMTKTEWIQWVKNYAVYGPDKLLRPKAGS
PAPV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcctcctcctcccgctcccccttcaggggctgccgcccctccgggcaatggc
gctcctcgtccgcaggtcatcgcgcgcaagccggccacggccaacccgctggtggcaagg
aagaagccacgcccgaagcctgccctctcccgtccaccggcgcccgccgccgccttggcc
ccgagcaaaggcggccccgtagcgcccaagaaacccatcctcaacgacccgaacgatccc
aagatgcgccagctggcccagacccgcgcccagaacggcggctggtccgaacaggtttct
gccaagtacaccgagtttccgctcgtcgtgaccaaaaagtcgctgctcgagggcatccgg
caccacatcatgcgtctcaacaagggcaagggggagccgggcaaggccaagggcgatgcc
attgtcgacgtgacgaaccaggaccagttcccgcgccccgtcacgctgctgcgccgcgac
ccgaggttgccgcccgcgcaccgcatggccgtcaaggaggagtcgacgccccctccgctc
gaccctgcggcggcggccgagtacgagcgcgctcgccagctcaaggccgagaaggaggcc
cagcgcgccctcgaccaggcccagatcgcgccggtgcttcggggctcgaacgatccgaag
ccgaccaagaaggacaaccaaaagaaggacaagcccatcgccttttacgggcgaaactcg
gacatgcaaaagaaggagtccaagatccactacgaggagacgtggccgtggcacctggag
gacgccgagggcaagtccggcgtgtgggtcggctcgtacattgccagcctctcggacctc
aacgtcgccctcgtcatcgacggcgcgcggttccggatgatcccgctggagcggttttac
cgcttcgacgagaagcccaagtttgagaccctgtcgctcgacgacgccgagaagctgatg
tacgaggtcaaggaggtcaagcgctgggtcatgaagcaaaaggagcaggagcagctcgag
cgggagaagagcgagacgcgccagttcctgcggggccccgcccgcgtcaagaccgagagc
ctcacgtcccgcctggcccgccgctccgagcggcaggacgacttcgagctcgacatggag
ggcgacgagttccaggacgacgacgaggcccccaacatcgagggagacgaggacgaggat
accaaggaggccaaggagcgcatccgccgcgagcaggtgcaggccaacacgttcggcgag
ggcgaggaggccaaggtggaacaggaggagcgcgagctgcagctcgagaggctacgggcc
aagatgattggcaagcagacggtcaagaccctcaagaagctggagcacgcccacgacttt
gacgactttgagtccggctccgaggagaacaaccccttcacggatgcttcggtccgacga
ggaggaatccgacgacgaggaggagcgcgaggacgaagacgccgccaaaaaggacccggg
cgccgcctcgggggccacgaccaagggcaacacgacgccctcgggccggcagaaggcggt
cgacgcgctcaagaagggcaacaagctcaagaggcctgggtcccccaacatgtccgagtc
gagcgacaacgaggcggcccgcaagaagctcaagacgacggcgggcaagggctccgtcgt
gcccagccgcggcggcaccccatcccgggccggcccaagccgccggccgcgggatcgtcg
gccatgagcgacggcgaggccaccgcgggagagatgtcggatgcccccggcgccaagctg
aagcaaaagttcaaggccaagacggtgatgcgccccgcccccggcgcgacgccgtcgggc
tcgagggcgggcagcccggctccgggcggtggtggctccgccgccgccgccaagcccacc
ggcacccccagcggctcgcctcctccgaccggccaggcgccggacaagatccaacccaag
gagatcgccgacgccatcgccacccacgccaaggacggcatcgccctgccggctctgttc
cagatgttccagaagcgcatcaacaagcccgggcacatgaccaagacggagtggatccag
tgggtcaagaactacgccgtctacgggccggacaagctgctgaggcccaaggcgggaagc
ccggcgccggtgtga
DBGET
integrated database retrieval system
