KEGG   Remersonia thermophila: 98126055
Entry
98126055          CDS       T10833                                 
Symbol
VTJ83DRAFT_4874
Name
(RefSeq) hypothetical protein
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
rthe  Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rthe03036]
    98126055 (VTJ83DRAFT_4874)
Chromosome and associated proteins [BR:rthe03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    98126055 (VTJ83DRAFT_4874)
   microRNA pathway
    RISC loading complex
     98126055 (VTJ83DRAFT_4874)
SSDB
Motif
Pfam: Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 Helicase_C DEAD ResIII SWI2_SNF2 ERCC3_RAD25_C AAA_22 DUF4276
Other DBs
NCBI-GeneID: 98126055
NCBI-ProteinID: XP_070866324
JGI: Remth1_4874
LinkDB
Position
4:complement(join(2579439..2579469,2579744..2581026,2581084..2583737,2583799..2584183))
AA seq 1450 aa
MMAAEHQEPSASYAMESNALTNADHSADDANDTDKEPGGGKRWALNPEPKRRNILNRKRA
EQEAFNVWIEENQEALTSSVNKLVVDGDEFRTLMRDFKNERIIANPRDYQLELFELAKKQ
NTIAVLDTGSGKTLIAALLLRWIIQNELVDRAQELPKRISVFLVDKVALVFQQHAVLECN
LDFPVEKLCGDDMLENEPREIWDRVIENNMAVVCTAEVLNQGLHRSYIRMDQINLLVFDE
AHHTKKNHPYARIIKDFYAEMDDSKPRPRIFGMTASPVDAHVDPQIAVAELEALLHSRIA
TIADPVVFQHGSARARNELSVEYPKKKKDWDTDLSRALKQLVGDNGLLRKCFAFTSTAAA
ELGPWCADRYWQLLFGDGNAGFTLESRTERELLRAADYLKGAGVHVDKVREARKLVEEHD
LGRPRLSADLLSSKVICLYKILCDQFKGVNHNRRCIVFVRQRNVASLLADLLQQPEMRIP
GLEPAALMGGGRTESSLDGARVSYRDQVRTLVKFKNGDVNCLFATSVAEEGLDIPDCNVV
IRFDPSNTLIQYIQSRGRARQEDSVYIHMLEKGNHEHREKVALMKQNEGALRRFLENLPE
DRKLTGSTFNMDYFLRKERNQRQYTVPETGAKLNYKQSLLYLAAFVASLPHPPEAVPTAS
YVITAVPGGFQCEVILPGSSPIRSATGRVHASKAVAKCSAAYEMCLQLFKNKYLDEHLRP
VFTKQLPAMRSARLALSSKQTQYDMRIKPEIWSRLGEPQELYVTVLTLENPAALGRPSTP
LLLLTREPIHKMAPFPLFFGNGSSTPAACIPVRGCLSVDEAQLQGLTAFTLTVFKDVFSK
EYDATAAQLPYFLAPSRLHHDHDFRSLPDPSAVIDWATVQLVRQNEHIAYRLDEPHDDDF
FRDKFVADCYDGARKFFLKRRRADMKPTDLVPAGVVAPSHRAWSKAGNERSVLNWSFASW
SKLSTYRTLQQDQPVVEAELLPVRRNLLDDKPADRPFAPETCFIVLEPMRISPLPVRVVA
MIYTLPSILHRLEASLIAMDACKKIGLAEIRPDLALEAFTKDGDGTDEAQERDAEKAVTK
AGMGNNYERLEFLGDCILKMATTISVVTLLPEKAELDYHVERMLMICNRNLFNNALELHL
EEHIRSMAFDRRSWYPQGLTLKRGKRADGSASKHVLADKTIADVCEALIGAAYLTGRDRS
GDPATRFDLAIRAVTYLVRNSHHPMTSWSQYYAAYSAPSWATAPATPPQLDMADRFAARL
GYRFRHPRLLRSAFQHPSYPTMYERLPSYQCLEFLGDALLDMACVEFLFDAYPGADPEWL
TEHKMAMVSNQFLGCLAVYLGFHRAMQHVSPQVQRQIVDYAAEVEDALQAAREDAGRKGS
ADPEKDFARDFWVVLSQPPKCLPDVVEAYIGAVFVDSGYDFGRVREFLEKHVLPFFGDPR
LSSVRCECTG
NT seq 4353 nt   +upstreamnt  +downstreamnt
atgatggctgccgaacatcaagagccgtccgcttcatatgccatggaaagcaatgccttg
accaacgctgaccacagcgctgatgacgctaatgacaccgacaaggaacctggcggcggc
aagcggtgggcgctgaatccagagcccaagcgtcggaatatcttaaatcgaaagcgggcc
gaacaggaagccttcaatgtctggatcgaggagaaccaggaggcactcacaagcagcgtc
aacaagctcgttgttgacggggacgaattccgcaccctgatgcgcgacttcaagaacgaa
cgcatcatcgcaaacccgcgcgactaccagctcgaattgttcgaactggccaagaagcaa
aacaccattgctgtccttgacaccggatctgggaaaaccctcatcgccgccttgcttttg
cgatggatcatccaaaacgagctcgtggaccgggcccaagagcttcccaaacgcatctct
gtcttcttggtggacaaggtcgccctcgtgttccagcaacatgccgtgcttgagtgcaac
ctggacttccccgtcgagaagctgtgcggcgacgacatgcttgagaacgaacctagagaa
atctgggaccgagtcatcgagaacaacatggctgtcgtctgtacggccgaggtcctcaac
cagggcctccaccgctcgtacatccggatggatcagatcaaccttctcgtcttcgacgag
gcccaccacaccaagaagaaccacccctatgcccgcatcatcaaggacttttacgccgag
atggacgacagcaagccgcgcccgcgcatctttggcatgacggcctcccccgtcgacgcc
catgtcgatccccagatcgccgtcgccgagctcgaggccctgttgcacagccgcatcgcc
accatcgccgacccggtcgtcttccagcatggctcggccagggcgaggaacgagctctcc
gtcgagtaccccaagaagaagaaagactgggacacggacctcagccgggccttgaagcag
ctcgtcggcgacaacggcctgctgaggaagtgcttcgccttcacatccaccgcggccgcc
gagctcgggccttggtgcgccgaccggtattggcagcttctgtttggagacggcaacgct
ggcttcacgttggagtctaggacggagagggagctgctccgcgcggcggattacctcaag
ggggctggggtgcatgttgacaaggtgcgagaggcgcgcaagctggtggaagagcacgac
ttgggccggcccaggctcagcgccgacctcctctcctccaaggtcatctgcttgtacaag
atcctctgcgaccagttcaagggcgtgaaccacaaccggcggtgtatcgtctttgtcagg
cagcgcaatgtcgcctcgctgctggcggaccttttgcagcagccggagatgcgcatcccg
gggctggagcctgcggcgctgatgggcggcgggcgcacagagtcgagcctggacggcgcc
agggtatcgtaccgcgaccaagtccggacgctcgtcaagttcaagaacggcgacgtcaac
tgcctcttcgccacctcggtcgccgaggaagggcttgacattcccgactgcaacgttgtc
atccgctttgaccccagcaacaccctcatccagtacatccagtcccgcggccgcgcgcgc
caggaggattccgtctacatccacatgctcgagaaggggaaccacgagcacagagagaag
gtcgccctgatgaagcagaacgagggcgctttgcgaaggttccttgagaacctgcccgaa
gaccgcaagctcacgggcagcaccttcaacatggactacttccttcgcaaggagcgcaac
cagcggcagtacaccgtccccgagaccggggccaagctgaactacaagcagagcctgctc
tacctggccgcctttgtggcctcgctgccgcacccgcccgaggcggtcccgacggccagc
tacgtcatcaccgccgttccaggcggctttcagtgcgaggtgattctgccaggctcgtcg
cccatccgcagcgccacgggcagggtccacgcgagcaaggccgtggccaagtgctcggcg
gcgtacgaaatgtgtctccagctcttcaagaacaagtacctcgacgagcacctgcggccc
gtcttcaccaagcagctcccggcgatgcgcagcgctcgccttgccctgagctccaagcag
acgcagtatgacatgcgaatcaagcctgaaatctggtcgaggctgggagagccccaagag
ctgtacgtcacggtcttgacgctggagaacccggctgctctcgggcgcccgtcgaccccg
ctgctcctcctcactcgggagccgattcacaagatggcccccttcccgctgttctttgga
aacggtagctccacgccagccgcgtgcattccagtccgcggatgcctgagcgtcgacgag
gcccagctccaaggcctgacggcgtttacgctgaccgtgttcaaggacgtcttcagcaag
gagtacgacgcgacagccgcccagctgccctacttcctcgccccgagccggctgcaccac
gaccacgacttccgatcccttccggacccgagcgccgtcatcgactgggccacggtccag
cttgtccggcagaacgagcacatcgcgtaccgcctcgacgaaccgcacgacgatgacttc
ttccgggacaagttcgtggcggactgctacgacggcgcccgcaagttcttcctcaagcgc
cgccgcgccgacatgaaaccgacggatctggtgcccgcaggcgtcgtcgcgccgtcgcac
agggcgtggagcaaggcgggaaacgagcgcagcgtgctcaactggagcttcgcctcgtgg
tccaagctcagcacgtatcgtacgctccagcaagaccagccggttgtcgaggcggagctg
ctgccagtcaggaggaacttgttggatgacaagcctgctgatcggccctttgctccagag
acgtgctttatcgtcctcgagcccatgaggatctctccgctgcccgtccgcgtcgtagcg
atgatttacaccctaccctcgattcttcatcgcctcgaagcgagcctcatcgccatggac
gcctgcaagaagatcggtcttgccgagatccgccccgacctggccctcgaagccttcacc
aaggacggcgacggcaccgacgaggcgcaggagcgagacgccgagaaggccgtcactaaa
gccggcatgggcaacaactacgagcgcctcgagttcctgggcgactgcatccttaagatg
gccaccaccatctcggtcgtcacgctcctcccggagaaggccgaactggattaccacgtg
gagagaatgctgatgatttgcaatcgcaacctcttcaacaacgccctggagcttcacctc
gaggagcacatccgctccatggcctttgaccgccgcagctggtaccctcaggggctcacg
ctcaagcgtggcaagcgcgcggacggctcggccagcaagcatgtcctcgcagacaagacc
atcgccgacgtgtgcgaggccctcatcggcgccgcttacctcaccggccgcgatcgctca
ggcgacccggccacccgcttcgaccttgccatccgcgccgtcacctacctagtccgcaac
tcccaccaccctatgacgtcctggtctcagtactacgccgcctattccgccccgtcctgg
gccaccgccccggccacgcccccccagctcgacatggccgaccgcttcgccgcccgcctc
ggctaccggttccgccacccacgcctgctccgctccgccttccaacacccaagctaccct
accatgtacgagcggctcccttcgtaccagtgcctcgagttcctcggcgacgcgctgctc
gacatggcgtgcgtcgagttcctttttgatgcatacccgggcgccgaccccgaatggctg
acggagcacaagatggccatggtgagcaaccagttcctggggtgcctggccgtgtacctg
ggcttccaccgcgccatgcagcacgtttcgccgcaggtgcagaggcagatcgtggactac
gcggccgaggtggaagatgcgctgcaggccgcgagggaggatgccggccggaaagggagc
gcggatccggagaaggactttgcgagggacttttgggtcgtcctctcccagccgcccaag
tgtcttccggacgtggtcgaggcgtacatcggggccgtctttgtggatagcggctatgac
tttgggcgggtcagagagtttctggagaagcatgtgctgccgttctttggggatcccagg
ttgtcgtctgtgcggtgcgagtgcacggggtaa

DBGET integrated database retrieval system