Remersonia thermophila: 98126072
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Entry
98126072 CDS
T10833
Symbol
VTJ83DRAFT_489
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rthe Remersonia thermophila
Pathway
rthe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
98126072 (VTJ83DRAFT_489)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rthe02000
]
98126072 (VTJ83DRAFT_489)
04147 Exosome [BR:
rthe04147
]
98126072 (VTJ83DRAFT_489)
04090 CD molecules [BR:
rthe04090
]
98126072 (VTJ83DRAFT_489)
Enzymes [BR:
rthe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
98126072 (VTJ83DRAFT_489)
Transporters [BR:
rthe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
98126072 (VTJ83DRAFT_489)
Exosome [BR:
rthe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
98126072 (VTJ83DRAFT_489)
CD molecules [BR:
rthe04090
]
Proteins
98126072 (VTJ83DRAFT_489)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_21
AAA_16
AAA_22
RsgA_GTPase
nSTAND1
DUF3987
AAA_15
AAA_33
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
98126072
NCBI-ProteinID:
XP_070869842
JGI:
Remth1_489
LinkDB
All DBs
Position
1:join(1751361..1755347,1755451..1755477)
Genome browser
AA seq
1337 aa
AA seq
DB search
MGDSSSEHGNAEKLEPVPVTTADKPAAGSDASPEGDKQNKQDDAPGKDPKARPEREATPQ
DYFRVFSYAKKWDLVLMVAAGVASIGAGTTLPLLNVVFGRLVGDFNSFATPNAQSLDEFS
AQINRLSLYLFALFIARFGLNYISKFCFRLIGIRMSAAVRLHYLRSLFGQTIHVLDTMPS
GAAASTITSTSNTLQLGISEKLGTFLEFTSCIITAIIVAFTYSWSLTLVTASVIIFISVV
ISILLPFIIKGHGRNTKAEAKATSIATEAFGTIRMITSCGAEARMSERYAEWVKKAKQAV
FFTAPFMSVQFGLIFFGFYAVFGLAFWYGMKSIVEGRIDDVSTIIIVLMSVMIMVMSIER
ITTPLIAISKAMVAAAEFFSVIDAPKPPMGTLKEPDVTADQDILFQDVHFAYPSRPSKKV
LDGLNLRIAANVNTAIVGPSGSGKSTIVGLIEGWYTLQEQYVIAKAVEKDKNKKDKEKKK
GKKEGDEDGGDDDDDAAAQLNPEDAGPPVELKGSISTCGRELTEIDMKWWRSQIGLVQQE
PFLFNDTIFNNVAAGLIGTQWENETDEVKLELVKEACRESFADEFIDRLPDGYNTQVGDA
GARLSGGQRQRIAIARSIIKKPKILILDEATSAIDVRGERIVQQALERASKGRTTITIAH
RLSTIKNADRICVLQNGRVVEEGTHETLLQNELGVYYGLVHAQKLSLGDETGEEESLQEE
DLGAVLAREKSAAKSMAGSAKQGGGPIWKNRNIFNGFGKLLYEQRSRLPFYIFALVGAVG
AAAAVPIQAYLFAQVVTSFQEQDPAALYDRTTFWSKMWVVLAVGVGVSYFLTAFVSTYLE
GYITAEYRKEYFESILFQPTSYFDKDGHATGQLTARLSSDPQALKELLGINLMMMLIGVF
SLVGALAISFAYGWKLALVALCVTVPLSLLAGFFRMRYEMQFNAMNEAVFQESSKFAAES
IGAFRTVNALVMEDSISSRYQRLLDGHVSAAFRKARYTTFVFAFADSIGFGCQALIFWYG
GQLLKSGEYTVGAFLVTYMAVIQGAESAGQWISLGPNAVQASEAANRILQARETRIRDGV
SASEQIPDTDGGVRIELKDVHFKYPTRDVSIFRGLNITIEKGQFAALVGASGSGKTSIVS
LLERFYDVGKGQILFNGKDISEINVYQYRKLLSLVAQEPSLFHGTIRENILLGVDPASVT
EEQLHQCCRDANIHDFIVSLPEGYDTNIGSRGVSLSGGQKQRIAIARALVRNPRVLLLDE
ATSSLDSESEKLVQAAFERVAKGRTTVAVAHRLATIQGADVIYVLGEGKVLEKGSHAELL
KKKGVYWHMCHNQALDR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagcagctccgagcacggcaacgccgaaaagctggagccggtcccggtgacc
accgccgacaagcccgcggccggctccgacgcgtctcccgagggggacaagcagaacaag
caggatgacgcgcccggaaaggaccccaaggcgcgccccgagcgcgaggccactcctcag
gactacttccgcgtcttttcgtacgcgaagaagtgggatctcgtcttgatggtggccgcc
ggcgtcgccagcatcggcgccggcaccacgctgccgctgctcaacgtcgtcttcggccgc
ctcgtcggcgacttcaacagcttcgcgacccccaacgcccagtctctggacgagttctcg
gcccagatcaaccgcctctccctctacttgtttgccctcttcattgcccgcttcggcctc
aactacatcagcaagttctgcttccgtctgatcggcatccgcatgtcggccgccgtccgc
ctgcactacctccgctccctcttcggtcagaccatccacgtccttgacaccatgccctcg
ggtgccgccgcgagcaccatcacctcgacctccaacacgctgcagctcggcatctcggag
aagcttggcacgttcctcgagttcacctcgtgcatcatcaccgccatcatcgtggccttc
acgtacagctggtccttgaccctcgtgaccgcctccgtcatcatcttcatctccgtcgtc
atctccatcctgctgcctttcatcatcaagggacacgggaggaacaccaaggccgaggcc
aaggccacgtccatcgccaccgaggcctttggcaccatccgtatgattacttcgtgcggc
gccgaggcccgcatgtcggagcggtatgccgaatgggtcaagaaggccaagcaggccgtc
ttcttcaccgcgcccttcatgtccgtgcagttcggcctcatcttctttggcttctatgcc
gtctttggcctggccttctggtacggcatgaagtccatcgtggagggtcgcatcgacgac
gtctccaccatcatcatcgtcctcatgtccgtcatgatcatggtcatgtccatcgagcgc
atcacgacgcccctgattgccatctccaaggccatggtggccgccgccgagttcttctcc
gtcatcgacgcccccaagccccccatgggcaccctgaaggagcccgatgtcaccgccgac
caggacatcctctttcaggacgttcacttcgcctaccccagccgcccctccaagaaggtc
ctcgacggcttgaacttgcgcatcgccgccaacgtcaacacggccatcgtgggtcccagc
ggatccgggaagagtaccattgttggcctgatcgaggggtggtacaccttgcaggagcag
tacgtcatcgccaaggccgtcgagaaggacaagaataagaaggacaaggaaaagaagaag
ggcaagaaagagggcgacgaggatggcggcgacgacgatgacgacgcggccgcccagctg
aatcccgaggacgctggccccccggtggagctgaagggcagcatttccacctgcggccgg
gagctcaccgagatcgacatgaagtggtggcgctcgcagatcggcctcgttcaacaggag
cccttcctcttcaacgataccatcttcaacaacgttgcggccggcctgatcgggacccag
tgggagaacgagacggacgaggtcaagctcgagctggtcaaggaggcttgccgcgaaagc
ttcgccgacgagttcatcgaccgcctccccgacggctacaacacgcaggttggcgacgcg
ggcgccaggctcagcggcgggcagcgccaacgcatcgccatcgctcgcagcatcatcaag
aagcccaagatcttgatcctcgacgaggccacttcggccatcgacgtccgcggcgaacgc
atcgtgcagcaggctctcgagagggcctccaagggtcggaccaccatcaccatcgcccac
cgtctgtccaccatcaagaatgccgaccgcatctgcgtcctgcagaacggccgcgtcgtc
gaggagggcacccatgagaccctgctgcagaacgagctgggcgtctactacggcctcgtg
cacgcgcagaagctgtcgctgggcgatgaaacgggcgaggaggagagccttcaggaggag
gaccttggcgcggtgctggctcgcgagaagagcgctgccaagtcgatggctggttccgca
aagcaggggggcggtcccatctggaagaaccgcaacatcttcaacgggttcggcaagctc
ctgtacgagcagcgcagccgcctgcctttctacatcttcgccctcgtcggcgccgtgggc
gccgccgccgccgtgcccatccaggcctatctcttcgcccaggtcgtcacgagcttccag
gagcaggatcccgcggccctttacgaccggaccaccttctggtccaagatgtgggtggtc
ctggccgtcggcgtcggcgtgagctacttcctcaccgccttcgtgtcgacgtacctcgag
ggctacatcacggccgagtaccgcaaggagtacttcgaatcgatcctgttccagcccact
tcgtactttgacaaggacggccacgcgacgggccagctgacggcgcgtctctcgagcgat
ccgcaggcgctaaaggagctgctgggcatcaacctcatgatgatgctcatcggcgtcttc
tcgctggtcggcgccctggccatctcgttcgcctacggctggaagctcgccctggtcgcc
ctctgcgtcacggttcctctcagcctcctggccggcttcttccgcatgcgctacgagatg
cagttcaacgccatgaacgaggccgtcttccaagagagctccaagttcgcggccgagtcc
attggcgccttccgcaccgtcaacgccctcgtcatggaagacagcatctcgagccgctac
cagcgcctcctcgacggccacgtctccgccgccttccgcaaggcccgctacacgacgttc
gtcttcgccttcgccgacagcatcgggttcggctgccaggccctcattttctggtacggc
ggccagctgctcaagagcggcgagtacacggtcggcgccttcttggtgacgtacatggcg
gtcatccagggcgccgagtcggcgggccagtggatcagcctgggccccaacgcggtgcag
gcgtccgaggcggccaaccgcatcctgcaggcccgcgagacgcgcatccgcgacggcgtg
tcggcgagcgagcagatccccgacacggacggcggcgtgcgcatcgagctcaaggacgtg
cacttcaagtacccgacgcgcgacgtgtccatcttccgggggctcaacatcaccatcgag
aagggccagttcgcggcgctggtgggcgcgtccggctcgggcaagacgtccatcgtcagc
ctgctggagcgcttctacgacgtcggcaagggccagatcctgttcaacggcaaggacatc
tccgagatcaacgtgtaccagtaccgcaagctgctgtccctcgtggcgcaggagccgtcg
ctcttccacggcacgatccgcgagaacatcctgctgggcgtcgacccggcgagcgtgacg
gaggagcagctgcaccagtgctgccgcgacgcaaacatccacgactttatcgtctcgctc
cccgagggctacgacaccaacattggcagccgcggcgtgagcctcagcggcgggcagaag
cagcgcatcgccatcgcccgcgcgctcgtccgcaacccgcgcgtgctgctgctcgacgag
gcgacgagctcgctcgactcggagagcgagaagctggtgcaggccgcctttgagcgcgtg
gccaagggccgcacgacggtcgccgtggcccaccggctcgcgacgatccagggcgccgac
gtcatctacgtcctcggcgagggcaaggtgctcgagaagggcagccatgccgagctgcta
aagaagaagggcgtgtattggcatatgtgccacaatcaggcgctcgacaggtaa
DBGET
integrated database retrieval system
