Remersonia thermophila: 98126085
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Entry
98126085 CDS
T10833
Symbol
VTJ83DRAFT_4900
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
rthe Remersonia thermophila
Pathway
rthe03018
RNA degradation
rthe03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
98126085 (VTJ83DRAFT_4900)
mRNA degradation factors
5'-3' decay
Lsm complex
98126085 (VTJ83DRAFT_4900)
Spliceosome [BR:
rthe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
98126085 (VTJ83DRAFT_4900)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
98126085
NCBI-ProteinID:
XP_070866350
JGI:
Remth1_4900
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All DBs
Position
4:complement(join(2665641..2665832,2665889..2665939,2666079..2666219,2666304..2666306))
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AA seq
128 aa
AA seq
DB search
MLPLGLLTAAQGHPMMVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDKFMRLKEAY
VKGNNIKYLQISEEVLDIVKEQQSQQQASYRGGRGGSSRGDHGGRGGDRGGRGGRGRGGA
RGGRGRGS
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctcgggctcctcacggccgcccaaggccacccgatgatggtcgagctcaag
aacggcgagacgctcaacggccatctcgttctgtgcgacacgtggatgaacctgacgctg
cgcgaggtggtgcagacaagtccggagggcgacaagtttatgcgcttgaaagaggcgtac
gtcaaggggaacaacatcaaatatctgcaaatctcggaggaggttctcgacatcgtcaag
gagcagcagagccaacaacaagcctcctaccgcggcggccgcggcggatcatcgagggga
gatcatggtggccggggcggagatcgcgggggacgtggtgggagagggaggggaggcgct
cgtggcgggaggggaagggggtcatga
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integrated database retrieval system
