Remersonia thermophila: 98126205
Help
Entry
98126205 CDS
T10833
Symbol
VTJ83DRAFT_5008
Name
(RefSeq) hypothetical protein
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
rthe Remersonia thermophila
Pathway
rthe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
98126205 (VTJ83DRAFT_5008)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98126205 (VTJ83DRAFT_5008)
Membrane trafficking [BR:
rthe04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
98126205 (VTJ83DRAFT_5008)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_28
Sec7
Sec7-like_HUS
DCB
Motif
Other DBs
NCBI-GeneID:
98126205
NCBI-ProteinID:
XP_070866458
JGI:
Remth1_5008
LinkDB
All DBs
Position
4:complement(join(3097161..3097825,3097896..3098400,3098461..3098806,3098861..3099147,3099244..3101891,3101959..3102289))
Genome browser
AA seq
1593 aa
AA seq
DB search
MQYRSRPVSVAVDPVSLVISECITITSALQKHARSPHSSVSAILGGSPNLIQLVPPNAPG
ARRSRRPGAEGGEDLAANRWGLRGKKGKSMQDNPLIAGFGRLRQELAGVKDIHRFDSLVL
LYPFLQIIQAKGTAAPVTILALRAIQKFLSYGFVAPQSPRFALAMQSLSAAITHCQFDIS
DPAQEEVVLLMILHLMEHMLSGPGGDILSDESVCDMMGRGLTICSRPRFSEVLRRTAEAS
MVRMVQIIFEDLKHLEAEAGEESEALDHQTSADMDSVTMDPAANGTDVPLNAPGAAEPEG
TPEPASEAAAAAAAADDDDDVAAGVAPAEARPSSSSDKESRSSASSETPGNASAESGRPS
TSSGATESAESVDLRPYSLPSIRELFRVLVSFLDPHDRKHPDQMRVMALRIIHVALEVAG
PSIARHPALASIAEDQLCSYLFQLVRSDNMAILQEALTVASTLLSTCRGVLKLQQELYLS
YLVACLYPSIEIPREPGIDPSLYSGIPQSPKLAKPPPPSQPSSGRSTPVAVKDRQKLGLE
GGARKPDARQAMVENIGVLTRMPSFLVELFVNYDCDEDRADLCEDMVSLLARNALPDSAT
WSTTSVPPLCLDALLRFIQYIAERLDQAPDTEGYPDPAALRERRRRKKLIIKGTNIFNDN
PRAGLAYLEDKGILDSASDPVSVAKFLKRTSRVNKKVLGEYLSKKGNEKILAAFIDQCDF
TGKRVDEALRVLLGTFRLPGESPLIERIVSSFAEKYCASSVPEGVANKDAVFILTYAIII
LNTDQHSPTVKNQTRMKFADFQRNLRGQNGGDDFPTEYLQDIFDTIRTNEIILPEEHDNK
HAFDYAWKELLLKTEEAGPLVLCDTNIYDADMFATTWNAIVSCLFFVFMSATDDTVYARV
ITGFDECARIATKYGISEALDEIVYRLSYISALSSESLANTSLNTEVQVGDTSVMVSELA
VRFGRDLRQQLATLVLFRVVTGSEHVIRKSWKHIIRIWLNLFVNSLIPPFFSTEADKLAL
PTIPLQPPSQVIDRAKQNDTGFFSAFTSYISSYAADDPPEPSDEELESTLCTVDCVNQCH
MGDVFANIASLPGHTLEALVDALLEQIPEDNGSTVITVKAENIPPSSPANGQKPRQSSAV
YDPGLVYILEFCTVLALRDDSTVELLGERVVKAIQGILRDVPRYHPILIERATYYLFNLL
RASYDYDYVRVPILLHNVSSFPRDTLIKASGLVLRGLKLCTETPCPLRNEMMTSPDFWVI
LQTLATHPDAAPAVFEILENSVSMTPSAIMADNYEAAIALLNEFASMASVGAIAEQQNDR
KQGGRRGGRPVKQDKPSENAVVERGVKALNSIHRLTGRIPHLMKQSHLETSKAWSAYWLP
VFQALTTQCTNPCREIRHLALGSLQRTLLSPELTTAKGGETEEGGASTEWTAIFGEVLFP
LILHLLKPEVFSSDRDGMSETRVQAASLLCKVFLQYLVALSTWEGMLDLWVKIIDIMDRL
MNSGQGDSLEEAVPENLKNVVLIMSSNGYLVPPSQDPSKKDLWEETWKRIDRFLPRLREE
LALEGPAEEPAAAATAAAAAAGEGEKAKEKEAA
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgcagtaccgcagccgtcccgtctcggtagccgtcgaccccgtgtccctcgtcatctcg
gaatgcatcaccatcacctcggccctccagaagcatgcccgctctccgcactcctcggtg
tcggccatcctgggcggcagccccaacctcatccagctcgtgcccccaaacgcacccgga
gcgcgccgctctcggagaccgggggccgagggcggcgaggacctagccgccaaccgttgg
ggcttgcgcggcaagaagggcaagagcatgcaggacaacccgctcatcgcggggttcggg
aggctgaggcaggagttggccggtgtcaaagatattcaccgattcgactccctcgtgctg
ctctacccgttccttcagatcatccaggccaagggcaccgccgcccccgtcaccatcctc
gccctgcgcgcgatccaaaagtttctgtcctacggcttcgtcgcgccccagtcgccgcgc
tttgccctcgccatgcagtccctctcggccgccatcacccactgccagttcgacatcagc
gacccggcccaggaggaggtggtgcttctcatgatcctgcacctgatggagcacatgctc
tccgggcccggcggcgacatccttagcgacgagagcgtctgcgacatgatgggccgcggc
ctgaccatctgttcgaggccgcgcttctccgaggtcctgcggcggactgccgaggcgtcc
atggtgcgcatggtgcagatcatctttgaggatctcaagcacctcgaggccgaggccggc
gaggagagcgaggctctggaccaccagacaagcgccgatatggatagcgtcaccatggac
ccggccgccaacgggacggatgtcccgctcaacgcgccgggagctgcggagcccgagggg
acgcccgagccggcgagcgaggccgccgccgccgccgctgctgcggatgatgatgatgat
gtcgccgcgggcgttgctcctgccgaagcccggccttcgtcaagctctgacaaagagagc
cgcagcagcgcctcgtccgagacgcccgggaacgcgagcgccgaatcgggccggccgagc
accagctccggcgctaccgagagcgccgagtcggtcgacctgcggccctactcgttgccg
tcgatccgcgagctctttcgcgtgctggtcagtttcctcgacccgcacgaccgcaagcac
ccggaccagatgcgcgtcatggcgctccgcatcatccacgtggccctcgaggtcgcaggc
ccgtcgatcgcccggcacccggcgctggcgagcatcgcggaggatcagctctgctcctac
ctgttccagctcgtgcgttcggacaacatggccatcctccaggaggcgctgacggtggcg
agcacgctgctttcgacgtgccgaggcgtgctgaagctgcagcaagagctgtacctctcg
tacctcgtagcctgcttgtatcccagcatcgagatcccccgggagccgggcatcgacccg
agcctgtattcgggcatccctcagtcccccaagctggcgaagccgccgccgccttcgcag
cccagcagcggtcgctccacgcccgtggcggttaaggatcgccagaagctcggcctcgag
ggcggcgcccgcaagcccgacgcccggcaggccatggtggagaacattggcgtgctcacc
cgcatgccttccttcctggtcgagttgtttgtcaactacgactgcgatgaggaccgggcc
gacctctgcgaggacatggtcagcctgctggcgagaaacgccttgcccgactccgccacc
tggagcaccacgagcgtgcccccgctgtgcctggacgcgctcctgcgctttatccagtac
atcgccgagaggctggaccaggcgcctgacacggaggggtaccccgatccggcggcgctg
cgggagcggcgccgccgcaagaagctcatcatcaagggcaccaacatcttcaacgataac
ccccgggccggcctggcgtacctcgaggacaagggcatcctcgacagcgcgagcgatccc
gtctccgtggccaagttcctcaagcggacgtcgcgcgtcaacaagaaggtcctgggcgag
tacctgtccaagaaaggcaacgagaagatcctggcggcgtttatcgatcagtgcgacttc
acgggcaagcgcgtcgacgaggcgcttcgcgtcctactcggcacgtttcgactgccgggc
gagtcgcccctgatcgagcgcatcgtcagctcgttcgccgaaaagtactgcgccagctcg
gtgcccgagggcgtggccaacaaggacgccgtcttcatcctgacgtacgccatcatcatc
ctcaacacggaccagcacagcccgacggtcaagaaccagacgcgcatgaagtttgccgac
ttccagcgcaacctccgggggcagaacggcggcgacgacttcccgaccgagtacctccag
gacatcttcgacaccatccggaccaacgagatcatcctgcccgaggagcacgacaacaag
cacgcctttgactacgcctggaaggagcttctgctcaagacggaggaggccggcccgctc
gtgctctgcgacaccaacatttacgatgccgacatgttcgccacgacgtggaacgccatc
gtgtcgtgcctcttcttcgtcttcatgtcggccaccgacgacaccgtgtacgcgcgcgtc
atcacgggcttcgacgagtgcgcgcgcatcgccaccaagtacggcatctcggaggcgctt
gacgagatcgtctaccgcctgagctacatctcggccctcagcagcgagtccctcgccaac
acgtcgctcaacaccgaggtgcaggtcggggacacgagcgtcatggtcagcgagctggcc
gttcgctttggccgggatctgcgccagcagctggccacgttggtgctgttccgcgtcgtg
acggggtcggagcatgtgattcggaagagctggaagcatatcatccgaatctggctcaac
ctgtttgtcaactcgttgatcccgccgttcttctcgaccgaggccgacaagctcgcgctg
ccgaccatcccgctgcagccgccgtcgcaggtgatcgaccgcgcgaagcagaacgacacg
ggctttttctcagcctttacctcgtacatctcgtcgtacgcggccgacgacccgccggag
ccctcggacgaggagctcgagagcacgctgtgcacggtggactgcgtcaaccagtgccac
atgggcgatgttttcgccaacatcgcgagcttgcccggccacaccctcgaagccttggtc
gacgctctgctcgagcagatccccgaggacaacggctcgaccgtcattacggtcaaggcg
gagaacatcccgccttcgtcgccggccaacgggcagaagccgcggcaaagcagcgccgtg
tacgacccgggccttgtctacatcctcgagttctgcaccgtcctggcgctccgcgacgac
agcaccgtggagctgctgggcgagcgcgtcgtcaaggccatccagggcatcctccgcgac
gtgccgcgctaccacccgattcttatcgagcgggcaacctattatctgtttaatctgctc
cgcgccagctatgactacgactacgtgcgcgtgcccatcctgctccacaacgtgtcgagc
ttcccgcgcgacacgctcatcaaggcgtccgggttggtgctgcggggcttgaagctgtgc
accgagacgccctgcccgctgcgcaacgagatgatgacgtctcccgacttctgggtcata
ctgcaaacgctggcgacgcaccccgacgcggcgcctgccgtgtttgagattttggaaaac
agcgtctcgatgacgccgtcggccatcatggcggacaactacgaggcggccatcgcgctg
ctcaacgagtttgcctccatggcgagcgtcggcgcgatcgccgagcagcagaacgaccga
aagcaaggcgggcgcaggggcggccggccggtcaagcaggacaagcccagcgaaaacgcc
gtcgtggagcgcggcgtgaaggcgctgaacagcatccaccggctgacggggaggatcccg
catctcatgaagcagtcccatctggagaccagcaaagcctggtccgcctactggctgccc
gtcttccaggcgctgacgacgcagtgcaccaacccgtgccgcgagatccggcacttggcg
ctcggctcgctgcagcggacgctcctgtcgcccgagctgacgacggccaaggggggggag
acggaagaaggaggggcctcgaccgaatggacggccatctttggcgaggttctgttcccg
ctcatcctccacctgctcaagcccgaggtgttctcgtcggaccgcgacggcatgagcgag
acgcgcgtccaggccgcgtccctgctgtgcaaggtctttttgcagtacctggtggcgttg
tccacgtgggagggcatgctggacctgtgggtcaagatcattgacatcatggaccggctg
atgaactcgggccagggcgacagcctggaggaggcggtgcccgagaatctcaagaacgtg
gtgctcatcatgtcgagcaacgggtatctcgtgccgccgagccaggatccgagcaagaag
gacctgtgggaggagacgtggaagaggatcgatcggttcttgccgaggctgcgggaggag
ttggcgttggaagggccggcggaggagcccgcggcggcggcgacggcggcggcggcggcg
gctggtgagggggaaaaggcgaaggagaaggaggcggcatga
DBGET
integrated database retrieval system
