Remersonia thermophila: 98126210
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Entry
98126210 CDS
T10833
Symbol
VTJ83DRAFT_5012
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
rthe Remersonia thermophila
Pathway
rthe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
98126210 (VTJ83DRAFT_5012)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98126210 (VTJ83DRAFT_5012)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
98126210 (VTJ83DRAFT_5012)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
98126210
NCBI-ProteinID:
XP_070866462
JGI:
Remth1_5012
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Position
4:join(3107320..3107446,3107512..3108260)
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AA seq
291 aa
AA seq
DB search
MTDRRRINGPPGETIPPFFDDADRAPETAKGRFRPSNAIRKMFLKTGVTPSASGSAYLEI
STSAKPGASGLKLSCSVHGPRSLPRSAPFSPHLVLTTHVKYAPFATRQRRGYLRDSSERD
LSVHLETALRGAIIADRWPKSGVDIIVSILEGDQERETSRSQGDEVWEMMNALSGCITVA
AAALADAGIDCVDTVAGGVAALVQDTDGDESQPSIVLDPVPSEHAKILAACCVAYLPTRD
EVTNLWFRGDVPASDMELYNSLVEKGIQASRNANRVLVGCLTESVGEGDTS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacggacagaaggcggatcaacggccccccgggggagaccatcccaccttttttcgac
gatgcagatcgcgctccagagacggccaagggccggtttcgtccttccaatgccatccgg
aaaatgtttcttaagaccggcgtgacaccttcagcatcggggtctgcctatctggaaatt
tcaacgtctgccaaaccaggagcctccgggctgaagctcagctgttcagtccacggccct
cggtctctccctagatcggcacccttctctccccacctcgtcctgacgacccacgtcaaa
tacgcgccgtttgcaacacgacagcggcgcggctatctccgggactcgagcgagcgggac
ctctctgtccacctggagacggcgcttcggggcgccatcatcgccgaccggtggcccaag
agcggcgtagacatcatcgtgtccatcctcgaaggcgaccaggagcgagaaacgtccagg
tcgcagggcgacgaggtatgggagatgatgaatgcgctcagcgggtgcatcacggtggcg
gcggcggcgcttgccgacgctgggatcgactgcgttgacacggtggccggcggcgtcgct
gccctggtgcaggacaccgacggcgacgagtcccagccgagcatcgttttggatcccgtg
ccatcagagcatgcaaagatcctggcggcctgctgtgtcgcctacctgccgacgcgggac
gaggtgacaaacctctggttcaggggggatgtacctgcatccgacatggagctctacaac
tcgctggtggaaaaggggatacaagcgtccaggaacgcgaatcgcgtactggtcgggtgc
ttgacagaaagcgtgggagaaggggataccagttga
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