KEGG   Remersonia thermophila: 98126214
Entry
98126214          CDS       T10833                                 
Symbol
VTJ83DRAFT_5016
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
rthe  Remersonia thermophila
Pathway
rthe03020  RNA polymerase
rthe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    98126214 (VTJ83DRAFT_5016)
  09124 Replication and repair
   03420 Nucleotide excision repair
    98126214 (VTJ83DRAFT_5016)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rthe03021]
    98126214 (VTJ83DRAFT_5016)
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98126214 (VTJ83DRAFT_5016)
Transcription machinery [BR:rthe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     98126214 (VTJ83DRAFT_5016)
  RNA polymerase III system
   RNA polymerase III
     98126214 (VTJ83DRAFT_5016)
  RNA polymerase I system
   RNA polymerase I
     98126214 (VTJ83DRAFT_5016)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      98126214 (VTJ83DRAFT_5016)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 98126214
NCBI-ProteinID: XP_070866466
JGI: Remth1_5016
LinkDB
Position
4:complement(join(3116185..3116293,3116380..3116723))
AA seq 150 aa
MSIPSDAQLFEDHFVVERLGDPKYDRVDRIYCHSKDQSISMSLDINKELFPCKVDENLHI
AIATSLSYDGSKDEERGWRDVAKAGTSDATLADIFDYVCYGKIYKFEDAEDGKTIKAYIS
FGGLLMSLEGPYKKLTPLRVDYVYLLARRI
NT seq 453 nt   +upstreamnt  +downstreamnt
atgtccatcccgtcagacgcccagctcttcgaggaccacttcgtggtcgagcggctcggc
gatcccaagtacgaccgcgtcgaccgcatctactgccactccaaggaccagagcatcagc
atgagcctcgacatcaacaaggagctcttcccctgcaaggtggacgagaacctgcacatc
gccatcgccacctcgctgtcgtacgacggcagcaaggacgaggagcgcggctggcgcgac
gtcgccaaggcgggcaccagcgacgccaccctcgccgacatctttgactacgtctgctac
ggcaagatctacaagtttgaggacgccgaggatgggaagaccatcaaggcgtacatctcg
ttcggcggcctgctgatgtcgctcgaggggccctacaagaagctgacgccgctgcgcgtc
gactatgtgtatctgcttgccaggaggatctag

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