Remersonia thermophila: 98126227
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Entry
98126227 CDS
T10833
Symbol
VTJ83DRAFT_5028
Name
(RefSeq) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
rthe Remersonia thermophila
Pathway
rthe03030
DNA replication
rthe03410
Base excision repair
rthe03420
Nucleotide excision repair
rthe03430
Mismatch repair
rthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
98126227 (VTJ83DRAFT_5028)
03410 Base excision repair
98126227 (VTJ83DRAFT_5028)
03420 Nucleotide excision repair
98126227 (VTJ83DRAFT_5028)
03430 Mismatch repair
98126227 (VTJ83DRAFT_5028)
03440 Homologous recombination
98126227 (VTJ83DRAFT_5028)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rthe01009
]
98126227 (VTJ83DRAFT_5028)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98126227 (VTJ83DRAFT_5028)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98126227 (VTJ83DRAFT_5028)
Protein phosphatases and associated proteins [BR:
rthe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
98126227 (VTJ83DRAFT_5028)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
98126227 (VTJ83DRAFT_5028)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
98126227 (VTJ83DRAFT_5028)
MMR (mismatch excision repair)
DNA polymerase delta complex
98126227 (VTJ83DRAFT_5028)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
98126227
NCBI-ProteinID:
XP_070866478
JGI:
Remth1_5028
LinkDB
All DBs
Position
4:join(3150263..3150316,3150396..3150451,3150509..3150735,3150805..3150872,3150928..3151687,3151744..3151916)
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AA seq
445 aa
AA seq
DB search
MDRYVQYLADHVLTEDKVVTYRLLSRELRVHVNTAKQMLHDFHRSQNAKRPGTVHATYLV
YGTKKASSDTVSASQNGDGDGDVDMTGSAPETDLAEVVPISTLTLVPEERLQDALETYEE
VSSLHVYSIAPHPTKDMALLVDAASQVQPLEFGEDRKKIAPILNSKARRRERQGAGLKAA
TAAATLAKPQAKAASKPAQATPFAKVKEDPATSQVKQEPTEKPASSVPAQKAAPVPKRGA
SGGIMQAFSKAAAKPAKPKKEETSTPAAPSAEPNVPALSDEGEDDDDDEMPQPKPRSAPR
HKTRQQINQELREMMEREDEKEEESKSDSPDEEPIEEPLEEEAPGPVPEPAKEEEEEKEV
VTSSSNGRRRGRRRVMRKKQIMDDQGYLVTIQEAAWESFSEDEAPPPPKAKAPAPAATSS
QAAKPAAKKGGPKGQGSIMSFFSKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctatgttcaatacctggccgaccatgttctcaccgaggacaaagtggtcacc
tatcggctcttgagccgagaactccgagtccatgtcaacacagccaaacagatgctccat
gactttcacagaagccagaatgccaaacgccctgggaccgtgcacgccacgtaccttgtg
tatgggaccaagaaagcgagcagcgacacggtctcggcgtcacagaacggcgatggcgat
ggcgatgtcgacatgacaggctccgctcccgagacagatcttgcggaggtggtgcccatc
tcgaccctcactctagtgccagaagagcggctccaagatgctctcgagacctacgaagaa
gtgtcctcgctccatgtctacagcattgcaccccatccaacaaaggacatggcactcctg
gtcgatgcggccagtcaggtgcagccgttggaatttggtgaggaccgcaagaagatcgcc
cctatcctcaactcaaaagcccgccgtcgggagcgtcagggagccggattgaaggctgct
acggccgccgcaaccctggccaagccgcaggcgaaggcagcctcgaagcctgcgcaagca
acgccgtttgccaaggtcaaggaggatccagccacctctcaggtcaagcaggaaccgacc
gagaaacccgcctcctccgtgccggcccagaaagccgcccctgtgccaaagcgcggtgcc
agcggtggcatcatgcaggccttctccaaggccgcagccaagcctgccaaacccaagaag
gaagagacgtcaacgcccgccgctcccagcgcggagcccaacgttccagctctttcggat
gaaggcgaggatgacgacgacgacgagatgccccagcccaagccacgcagcgctcctaga
cacaagactcgccagcaaatcaaccaggaacttcgggagatgatggaacgggaagatgaa
aaggaggaggagtcgaagtcagacagtcctgacgaggaacccatcgaggaacctctggag
gaggaagctccgggcccggtgccggagccggcaaaggaggaggaggaggagaaagaggtg
gttacttcttcttccaatggccggcggcgcgggaggagacgggtcatgcgaaagaagcag
attatggacgaccaaggatatctggtcaccatccaagaggcggcctgggaatcattttcg
gaggatgaggcaccaccgccaccgaaagcgaaggccccagccccagcagcgacctcttcg
caggcggcaaagccagctgcaaagaagggtgggcccaagggccagggcagcatcatgtcg
ttcttcagcaagaagtaa
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