KEGG   Remersonia thermophila: 98126237
Entry
98126237          CDS       T10833                                 
Symbol
VTJ83DRAFT_5037
Name
(RefSeq) hypothetical protein
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rthe  Remersonia thermophila
Pathway
rthe03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    98126237 (VTJ83DRAFT_5037)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rthe03021]
    98126237 (VTJ83DRAFT_5037)
   03036 Chromosome and associated proteins [BR:rthe03036]
    98126237 (VTJ83DRAFT_5037)
Transcription machinery [BR:rthe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     98126237 (VTJ83DRAFT_5037)
Chromosome and associated proteins [BR:rthe03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    98126237 (VTJ83DRAFT_5037)
   PBAF complex
    98126237 (VTJ83DRAFT_5037)
   GBAF(ncBAF) complex
    98126237 (VTJ83DRAFT_5037)
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 DUF3439 SSP160 Myb_DNA-bind_7 SANT_DAMP1_like RskA_N ZZ
Other DBs
NCBI-GeneID: 98126237
NCBI-ProteinID: XP_070866487
JGI: Remth1_5037
LinkDB
Position
4:complement(join(3188097..3189542,3189641..3190164,3190251..3190359))
AA seq 692 aa
MDESSVSYGTPTNAASPGANPILAQPPLPDANDQNEDVQMTEGPAIKQDSTTPAPGAGLD
GQGGASKGADAAGQDEEMGDAPKTEGGKADGAGSADGAGEAKTKEFIENAAREHLISQTH
AIVLPSYSTWFDMNTIHNIERKALPEFFNHRNRSKTPAVYKDYRDFMINAYRLNPVEYLT
VTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDADQRPSHVGPPFTGHFKIICDTPRGLQ
PWQPAADPVVTQGKENKDTEAKAAATPASKTELNLEVGRNIYEANAKHNKLNKSDGKPNG
ETPATNGVSGADELTKAPIAKIHCFNCGTDCTRIYYHSSQSDPSSKAKYDLCPSCYLEGR
LPANQTSAHYTKMENSAYSSVVDRDAPWSDAEILRLLEALERYDEDWGEIAEYVGTRTRE
ECVLQFLQLDIEDKYLESERLETPTGLSLLGNAGGHLPFSQTDNPVMSVVGFLASLADPA
STAAAANKSAEVLKQNLRSKLEGGSAADSQANGKGKDKEKEAGGDSMDVDIRQETTTTTT
TMTTTTTTTTTTASLANIPLAAMGARAGGLASHEEREMTRLVSAAVNVTLEKLELKLKYF
NEMESILQAERRELERARQQLFLDRLAFKRRVREVQEALRQAAAVGGEQGARLANEIAAA
AGDGQLMTFHPAPAPGAVQPLSAEGPIKSYEA
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggatgagagctcggtcagctacggcaccccaacaaacgccgcgtcgcccggtgccaac
ccgatcctggcgcaaccgccgctgccggatgccaacgaccaaaacgaggatgtgcaaatg
accgagggccccgccatcaagcaggacagcacaacccccgcgccgggcgccgggctagac
ggccagggcggcgcgtccaagggcgccgatgcggcgggccaggacgaggagatgggcgac
gcgccaaagaccgagggcggcaaggcggacggcgcgggctcggccgacggcgccggcgag
gccaagaccaaggagttcatcgagaacgccgcgagagagcatctcatctcgcagacccac
gccatcgtgctgcccagctacagcacctggttcgacatgaacaccatccacaacattgag
cgcaaggcgctgcccgagttcttcaaccaccggaaccgcagcaagacgcccgccgtgtac
aaggactaccgcgactttatgatcaacgcctatcgtctgaacccggtcgagtacctcacc
gtcacggcctgccgccgcaacctggccggcgatgtctgcgccatcatgcgcgtgcacgca
ttcctcgagcagtggggtctcatcaactaccaggtcgacgccgatcagcggccctcgcat
gtcggaccgccgttcaccggtcacttcaagatcatctgcgacacgcctcgcggcctccag
ccctggcagccggcggccgaccccgtcgtgacccaaggcaaggaaaacaaggacaccgag
gccaaggcggcagcgaccccggcttccaagacggagctcaacctcgaggtcgggcgcaac
atctacgaggccaacgccaagcacaacaagctcaacaagagcgacggcaagcccaacggc
gagacccccgccaccaacggcgtgtcgggcgccgacgagctcaccaaggccccgatcgcc
aagatccactgcttcaactgcggcaccgactgcacccgcatctactaccacagctcgcag
tcggaccccagcagcaaggccaagtacgacctgtgcccgagctgctacctcgagggccgc
ctgcccgccaaccagacgagcgcccactacaccaagatggagaactcggcctactcgtcc
gtcgtcgaccgcgacgcgccgtggagcgacgccgagatcctgcggctgctcgaggcgctg
gagcgctacgacgaggactggggcgagatcgccgagtacgtgggcacccggacgcgcgag
gagtgcgtgctgcagttcctgcagctggacatcgaggacaagtacctcgagtcggaacgc
ctcgagacccccaccggcctgagcctgctcggaaacgcgggcggccacctccccttcagc
cagaccgacaaccccgtcatgtcggtcgtcggcttcctggccagcctggccgaccccgcg
agcaccgccgccgccgccaacaagtcggccgaggtcctgaagcagaacctccgcagcaag
ctcgagggcgggagcgccgccgattcccaggccaacggcaagggcaaggacaaggagaag
gaggccggcggcgactccatggacgtggacatccggcaagagaccaccaccaccaccacg
acgatgaccaccaccaccacgacaaccaccaccaccgcctcgctcgccaacatccctctc
gccgccatgggcgcccgcgccggcgggctcgcctcgcacgaggagcgcgagatgacgcgc
ctggtctcggccgccgtcaacgtgaccctcgagaagctcgagctcaagctcaagtacttc
aacgagatggagagcatcctgcaggccgagcggcgcgagctggagcgcgcccgccagcag
ctgttcctcgaccgcctggccttcaagcgccgcgtccgcgaggtccaggaggcgctgcgc
caggccgcggccgtgggcggcgagcagggcgcgaggctggccaacgagatcgcggcggcc
gccggagacgggcagctcatgacgttccaccccgcgcccgcgccgggcgccgtgcagccg
ttgagcgccgagggtccgatcaagagctacgaggcctag

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